RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 ACSM4P0C7M7 580 aa12.52□□□□□ -0.4
TCOF1-207ENST00000504761 RPS4Y1P22090 263 aaKnown RBP12.52□□□□□ -0.4
TCOF1-207ENST00000504761 OR8G1Q15617 311 aa12.52□□□□□ -0.4
TCOF1-207ENST00000504761 ALKBH6Q3KRA9 238 aa12.52□□□□□ -0.4
TCOF1-207ENST00000504761 ELP2Q6IA86 826 aa12.52□□□□□ -0.4
TCOF1-207ENST00000504761 EGFL6Q8IUX8 553 aa12.52□□□□□ -0.4
TCOF1-207ENST00000504761 GABRG1Q8N1C3 465 aa12.52□□□□□ -0.4
TCOF1-207ENST00000504761 OR52N4Q8NGI2 321 aa12.52□□□□□ -0.4
TCOF1-207ENST00000504761 OR51A2Q8NGJ7 313 aa12.52□□□□□ -0.4
TCOF1-207ENST00000504761 UBL7Q96S82 380 aaPredicted RBP12.52□□□□□ -0.4
TCOF1-207ENST00000504761 B3GNT2Q9NY97 397 aa12.52□□□□□ -0.4
TCOF1-207ENST00000504761 TAS2R3Q9NYW6 316 aa12.52□□□□□ -0.4
TCOF1-207ENST00000504761 FOXJ2Q9P0K8 574 aa12.52□□□□□ -0.4
TCOF1-207ENST00000504761 MEX3AA1L020 520 aaKnown RBP12.52□□□□□ -0.41
TCOF1-207ENST00000504761 TO15178 435 aa12.52□□□□□ -0.41
TCOF1-207ENST00000504761 SSX4O60224 188 aa12.52□□□□□ -0.41
TCOF1-207ENST00000504761 KIR2DL3P43628 341 aa12.52□□□□□ -0.41
TCOF1-207ENST00000504761 ZNF546Q86UE3 836 aa12.52□□□□□ -0.41
TCOF1-207ENST00000504761 OR2M7Q8NG81 312 aa12.52□□□□□ -0.41
TCOF1-207ENST00000504761 HRASLSQ9HDD0 168 aa12.52□□□□□ -0.41
TCOF1-207ENST00000504761 OR5V1Q9UGF6 321 aa12.52□□□□□ -0.41
TCOF1-207ENST00000504761 RALGAPA1Q6GYQ0 2036 aa12.52□□□□□ -0.41
TCOF1-207ENST00000504761 SMCO3A2RU48 225 aa12.52□□□□□ -0.41
TCOF1-207ENST00000504761 ETV6P41212 452 aa12.52□□□□□ -0.41
TCOF1-207ENST00000504761 MFGE8Q08431 387 aaPredicted RBP12.52□□□□□ -0.41
TCOF1-207ENST00000504761 GFRALQ6UXV0 394 aa12.52□□□□□ -0.41
TCOF1-207ENST00000504761 TMEM91Q6ZNR0 172 aa12.52□□□□□ -0.41
TCOF1-207ENST00000504761 C20orf196Q8IYI0 205 aa12.52□□□□□ -0.41
TCOF1-207ENST00000504761 SLC39A7Q92504 469 aa12.52□□□□□ -0.41
TCOF1-207ENST00000504761 ABHD1Q96SE0 405 aa12.52□□□□□ -0.41
TCOF1-207ENST00000504761 CACNA1DQ01668 2161 aa12.51□□□□□ -0.41
TCOF1-207ENST00000504761 TNFSF12O43508 249 aa12.51□□□□□ -0.41
TCOF1-207ENST00000504761 BPNT1O95861 308 aa12.51□□□□□ -0.41
TCOF1-207ENST00000504761 CYCSP99999 105 aaKnown RBP12.51□□□□□ -0.41
TCOF1-207ENST00000504761 BAMBIQ13145 260 aa12.51□□□□□ -0.41
TCOF1-207ENST00000504761 PCOLCEQ15113 449 aa12.51□□□□□ -0.41
TCOF1-207ENST00000504761 GSG1Q2KHT4 349 aa12.51□□□□□ -0.41
TCOF1-207ENST00000504761 CDC20BQ86Y33 519 aa12.51□□□□□ -0.41
TCOF1-207ENST00000504761 KISS1RQ969F8 398 aaPredicted RBP12.51□□□□□ -0.41
TCOF1-207ENST00000504761 MBD2Q9UBB5 411 aa12.51□□□□□ -0.41
TCOF1-207ENST00000504761 IGKV1D-42A0A075B6H8 117 aa12.51□□□□□ -0.41
TCOF1-207ENST00000504761 BORCS7-ASMTA0A0B4J1R7 106 aa12.51□□□□□ -0.41
TCOF1-207ENST00000504761 AQP7P3A6NL99 342 aa12.51□□□□□ -0.41
TCOF1-207ENST00000504761 TRIM64CA6NLI5 447 aa12.51□□□□□ -0.41
TCOF1-207ENST00000504761 RECKO95980 971 aa12.51□□□□□ -0.41
TCOF1-207ENST00000504761 NANOS3P60323 173 aaKnown RBP12.51□□□□□ -0.41
TCOF1-207ENST00000504761 ZNF616Q08AN1 781 aa12.51□□□□□ -0.41
TCOF1-207ENST00000504761 RTL6Q6ICC9 239 aa12.51□□□□□ -0.41
TCOF1-207ENST00000504761 OR2T2Q6IF00 324 aa12.51□□□□□ -0.41
TCOF1-207ENST00000504761 ADAM19Q9H013 955 aa12.51□□□□□ -0.41
TCOF1-207ENST00000504761 RNF32Q9H0A6 362 aa12.51□□□□□ -0.41
TCOF1-207ENST00000504761 NGBQ9NPG2 151 aa12.51□□□□□ -0.41
TCOF1-207ENST00000504761 ST3GAL6Q9Y274 331 aa12.51□□□□□ -0.41
TCOF1-207ENST00000504761 DEGS1O15121 323 aa12.51□□□□□ -0.41
TCOF1-207ENST00000504761 XRCC2O43543 280 aa12.51□□□□□ -0.41
TCOF1-207ENST00000504761 CXorf67Q86X51 503 aaPredicted RBP12.51□□□□□ -0.41
TCOF1-207ENST00000504761 OR1J1Q8NGS3 322 aa12.51□□□□□ -0.41
TCOF1-207ENST00000504761 OR1S1Q8NH92 325 aa12.51□□□□□ -0.41
TCOF1-207ENST00000504761 AMELYQ99218 206 aa12.51□□□□□ -0.41
TCOF1-207ENST00000504761 FZR1Q9UM11 496 aa12.51□□□□□ -0.41
TCOF1-207ENST00000504761 PMS2P1A4D2B8 440 aa12.51□□□□□ -0.41
TCOF1-207ENST00000504761 OR4C45A6NMZ5 311 aa12.51□□□□□ -0.41
TCOF1-207ENST00000504761 COX6A1P12074 109 aa12.51□□□□□ -0.41
TCOF1-207ENST00000504761 PTBP1P26599 531 aaKnown RBP eCLIP12.51□□□□□ -0.41
TCOF1-207ENST00000504761 BRICD5Q6PL45 260 aa12.51□□□□□ -0.41
TCOF1-207ENST00000504761 SLC22A25Q6T423 547 aa12.51□□□□□ -0.41
TCOF1-207ENST00000504761 OR56B2PQ8NGI1 322 aa12.51□□□□□ -0.41
TCOF1-207ENST00000504761 COQ3Q9NZJ6 369 aa12.51□□□□□ -0.41
TCOF1-207ENST00000504761 TRAV8-7A0A075B6U6 113 aa12.5□□□□□ -0.41
TCOF1-207ENST00000504761 ZNF732B4DXR9 585 aa12.5□□□□□ -0.41
TCOF1-207ENST00000504761 GPM6AP51674 278 aa12.5□□□□□ -0.41
TCOF1-207ENST00000504761 OR8B8Q15620 311 aa12.5□□□□□ -0.41
TCOF1-207ENST00000504761 CDCP2Q5VXM1 449 aa12.5□□□□□ -0.41
TCOF1-207ENST00000504761 OR52W1Q6IF63 320 aa12.5□□□□□ -0.41
TCOF1-207ENST00000504761 DEGS2Q6QHC5 323 aa12.5□□□□□ -0.41
TCOF1-207ENST00000504761 ZFAND1Q8TCF1 268 aa12.5□□□□□ -0.41
TCOF1-207ENST00000504761 GPR160Q9UJ42 338 aa12.5□□□□□ -0.41
TCOF1-207ENST00000504761 POM121CA8CG34 1229 aa12.5□□□□□ -0.41
TCOF1-207ENST00000504761 RAD52P43351 418 aa12.5□□□□□ -0.41
TCOF1-207ENST00000504761 KISS1Q15726 138 aa12.5□□□□□ -0.41
TCOF1-207ENST00000504761 FBXL14Q8N1E6 418 aa12.5□□□□□ -0.41
TCOF1-207ENST00000504761 SMIM4Q8WVI0 70 aa12.5□□□□□ -0.41
TCOF1-207ENST00000504761 FAM234AQ9H0X4 552 aa12.5□□□□□ -0.41
TCOF1-207ENST00000504761 POFUT1Q9H488 388 aa12.5□□□□□ -0.41
TCOF1-207ENST00000504761 SIRPB1O00241 398 aa12.5□□□□□ -0.41
TCOF1-207ENST00000504761 TSPAN4O14817 238 aa12.5□□□□□ -0.41
TCOF1-207ENST00000504761 OGG1O15527 345 aa12.5□□□□□ -0.41
TCOF1-207ENST00000504761 DXOO77932 396 aaKnown RBP12.5□□□□□ -0.41
TCOF1-207ENST00000504761 ZNF728P0DKX0 622 aa12.5□□□□□ -0.41
TCOF1-207ENST00000504761 PTGS2P35354 604 aa12.5□□□□□ -0.41
TCOF1-207ENST00000504761 HRH1P35367 487 aa12.5□□□□□ -0.41
TCOF1-207ENST00000504761 RAB35Q15286 201 aa12.5□□□□□ -0.41
TCOF1-207ENST00000504761 SFRP5Q5T4F7 317 aa12.5□□□□□ -0.41
TCOF1-207ENST00000504761 OR8B12Q8NGG6 310 aa12.5□□□□□ -0.41
TCOF1-207ENST00000504761 VOPP1Q96AW1 172 aa12.5□□□□□ -0.41
TCOF1-207ENST00000504761 OCSTAMPQ9BR26 566 aa12.5□□□□□ -0.41
TCOF1-207ENST00000504761 DIDO1Q9BTC0 2240 aaKnown RBP12.49□□□□□ -0.41
TCOF1-207ENST00000504761 IGKV3D-11A0A0A0MRZ8 115 aa12.49□□□□□ -0.41
TCOF1-207ENST00000504761 RAP2BP61225 183 aa12.49□□□□□ -0.41
TCOF1-207ENST00000504761 MZT1Q08AG7 82 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms