RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 MSMPQ1L6U9 139 aa8.96□□□□□ -0.98
TPM3-217ENST00000504663 GFOD2Q3B7J2 385 aa8.96□□□□□ -0.98
TPM3-217ENST00000504663 C3orf36Q3SXR2 165 aa8.96□□□□□ -0.98
TPM3-217ENST00000504663 LINC00299Q6ZSB3 139 aa8.96□□□□□ -0.98
TPM3-217ENST00000504663 CCDC190Q86UF4 302 aa8.96□□□□□ -0.98
TPM3-217ENST00000504663 SLC25A28Q96A46 364 aa8.96□□□□□ -0.98
TPM3-217ENST00000504663 FGGYQ96C11 551 aa8.96□□□□□ -0.98
TPM3-217ENST00000504663 WDFY2Q96P53 400 aa8.96□□□□□ -0.98
TPM3-217ENST00000504663 NKX3-1Q99801 234 aaPredicted RBP8.96□□□□□ -0.98
TPM3-217ENST00000504663 ACTR6Q9GZN1 396 aa8.96□□□□□ -0.98
TPM3-217ENST00000504663 OR10A4Q9H209 315 aa8.96□□□□□ -0.98
TPM3-217ENST00000504663 MMP27Q9H306 513 aa8.96□□□□□ -0.98
TPM3-217ENST00000504663 ELOVL5Q9NYP7 299 aa8.96□□□□□ -0.98
TPM3-217ENST00000504663 N6AMT1Q9Y5N5 214 aa8.96□□□□□ -0.98
TPM3-217ENST00000504663 HCFC1P51610 2035 aa8.96□□□□□ -0.98
TPM3-217ENST00000504663 IGHV2OR16-5A0A0B4J2B6 119 aa8.95□□□□□ -0.98
TPM3-217ENST00000504663 IFITM5A6NNB3 132 aa8.95□□□□□ -0.98
TPM3-217ENST00000504663 AIPO00170 330 aa8.95□□□□□ -0.98
TPM3-217ENST00000504663 CCL21O00585 134 aa8.95□□□□□ -0.98
TPM3-217ENST00000504663 XRCC2O43543 280 aa8.95□□□□□ -0.98
TPM3-217ENST00000504663 LILRA1O75019 489 aa8.95□□□□□ -0.98
TPM3-217ENST00000504663 FAHP16930 419 aa8.95□□□□□ -0.98
TPM3-217ENST00000504663 IL32P24001 234 aa8.95□□□□□ -0.98
TPM3-217ENST00000504663 APLNRP35414 380 aa8.95□□□□□ -0.98
TPM3-217ENST00000504663 THBS4P35443 961 aa8.95□□□□□ -0.98
TPM3-217ENST00000504663 GSK3AP49840 483 aa8.95□□□□□ -0.98
TPM3-217ENST00000504663 BMXP51813 675 aa8.95□□□□□ -0.98
TPM3-217ENST00000504663 ERVS71-1P61550 626 aa8.95□□□□□ -0.98
TPM3-217ENST00000504663 TFF3Q07654 80 aa8.95□□□□□ -0.98
TPM3-217ENST00000504663 PLA2G7Q13093 441 aa8.95□□□□□ -0.98
TPM3-217ENST00000504663 UBE2V2Q15819 145 aa8.95□□□□□ -0.98
TPM3-217ENST00000504663 BIVMQ86UB2 503 aa8.95□□□□□ -0.98
TPM3-217ENST00000504663 LAX1Q8IWV1 398 aa8.95□□□□□ -0.98
TPM3-217ENST00000504663 CCDC54Q8NEL0 328 aa8.95□□□□□ -0.98
TPM3-217ENST00000504663 OR5H6Q8NGV6 325 aa8.95□□□□□ -0.98
TPM3-217ENST00000504663 APOBEC3DQ96AK3 386 aaPredicted RBP8.95□□□□□ -0.98
TPM3-217ENST00000504663 C1orf147Q96MC9 270 aaPredicted RBP8.95□□□□□ -0.98
TPM3-217ENST00000504663 C1QTNF6Q9BXI9 259 aa8.95□□□□□ -0.98
TPM3-217ENST00000504663 CHST5Q9GZS9 411 aa8.95□□□□□ -0.98
TPM3-217ENST00000504663 RGCCQ9H4X1 137 aa8.95□□□□□ -0.98
TPM3-217ENST00000504663 TBCCD1Q9NVR7 557 aa8.95□□□□□ -0.98
TPM3-217ENST00000504663 ZNF391Q9UJN7 358 aa8.95□□□□□ -0.98
TPM3-217ENST00000504663 V9GYH0 126 aa8.95□□□□□ -0.98
TPM3-217ENST00000504663 J3QW42 95 aa8.94□□□□□ -0.98
TPM3-217ENST00000504663 LDLRAD4O15165 306 aa8.94□□□□□ -0.98
TPM3-217ENST00000504663 ALX3O95076 343 aa8.94□□□□□ -0.98
TPM3-217ENST00000504663 PAHP00439 452 aa8.94□□□□□ -0.98
TPM3-217ENST00000504663 MAS1P04201 325 aa8.94□□□□□ -0.98
TPM3-217ENST00000504663 PRB1P04280 392 aa8.94□□□□□ -0.98
TPM3-217ENST00000504663 CD2P06729 351 aa8.94□□□□□ -0.98
TPM3-217ENST00000504663 PRF1P14222 555 aa8.94□□□□□ -0.98
TPM3-217ENST00000504663 GNLYP22749 145 aa8.94□□□□□ -0.98
TPM3-217ENST00000504663 PAX7P23759 505 aa8.94□□□□□ -0.98
TPM3-217ENST00000504663 ASCL1P50553 236 aa8.94□□□□□ -0.98
TPM3-217ENST00000504663 NAAAQ02083 359 aa8.94□□□□□ -0.98
TPM3-217ENST00000504663 PLP2Q04941 152 aa8.94□□□□□ -0.98
TPM3-217ENST00000504663 DYNC1I2Q13409 638 aaKnown RBP8.94□□□□□ -0.98
TPM3-217ENST00000504663 HLXQ14774 488 aaPredicted RBP8.94□□□□□ -0.98
TPM3-217ENST00000504663 IGFBP7Q16270 282 aa8.94□□□□□ -0.98
TPM3-217ENST00000504663 TBC1D28Q2M2D7 210 aa8.94□□□□□ -0.98
TPM3-217ENST00000504663 C1orf100Q5SVJ3 147 aa8.94□□□□□ -0.98
TPM3-217ENST00000504663 C1QTNF12Q5T7M4 302 aa8.94□□□□□ -0.98
TPM3-217ENST00000504663 UTS2BQ765I0 119 aa8.94□□□□□ -0.98
TPM3-217ENST00000504663 FJX1Q86VR8 437 aa8.94□□□□□ -0.98
TPM3-217ENST00000504663 GALNT11Q8NCW6 608 aa8.94□□□□□ -0.98
TPM3-217ENST00000504663 STEAP2Q8NFT2 490 aa8.94□□□□□ -0.98
TPM3-217ENST00000504663 OR1M1Q8NGA1 313 aa8.94□□□□□ -0.98
TPM3-217ENST00000504663 OR52N4Q8NGI2 321 aa8.94□□□□□ -0.98
TPM3-217ENST00000504663 OR13C9Q8NGT0 318 aa8.94□□□□□ -0.98
TPM3-217ENST00000504663 KCTD12Q96CX2 325 aaKnown RBP8.94□□□□□ -0.98
TPM3-217ENST00000504663 SLC25A38Q96DW6 304 aa8.94□□□□□ -0.98
TPM3-217ENST00000504663 SOSTQ9BQB4 213 aa8.94□□□□□ -0.98
TPM3-217ENST00000504663 RSRP1Q9BUV0 290 aa8.94□□□□□ -0.98
TPM3-217ENST00000504663 KCNK15Q9H427 330 aa8.94□□□□□ -0.98
TPM3-217ENST00000504663 PTTG3PQ9NZH4 202 aa8.94□□□□□ -0.98
TPM3-217ENST00000504663 V9GY05 133 aa8.94□□□□□ -0.98
TPM3-217ENST00000504663 IGKV1-27A0A075B6S5 117 aa8.93□□□□□ -0.98
TPM3-217ENST00000504663 SLC17A2O00624 439 aa8.93□□□□□ -0.98
TPM3-217ENST00000504663 SULT1B1O43704 296 aa8.93□□□□□ -0.98
TPM3-217ENST00000504663 SNRPBP14678 240 aaKnown RBP8.93□□□□□ -0.98
TPM3-217ENST00000504663 ZNF12P17014 697 aa8.93□□□□□ -0.98
TPM3-217ENST00000504663 CCNOP22674 350 aa8.93□□□□□ -0.98
TPM3-217ENST00000504663 CFL1P23528 166 aaKnown RBP8.93□□□□□ -0.98
TPM3-217ENST00000504663 GRNP28799 593 aaKnown RBP8.93□□□□□ -0.98
TPM3-217ENST00000504663 CHRNB4P30926 498 aa8.93□□□□□ -0.98
TPM3-217ENST00000504663 SOX6P35712 828 aa8.93□□□□□ -0.98
TPM3-217ENST00000504663 CLDN12P56749 244 aa8.93□□□□□ -0.98
TPM3-217ENST00000504663 NKX6-1P78426 367 aaPredicted RBP8.93□□□□□ -0.98
TPM3-217ENST00000504663 TLE1Q04724 770 aa8.93□□□□□ -0.98
TPM3-217ENST00000504663 SPOCK1Q08629 439 aa8.93□□□□□ -0.98
TPM3-217ENST00000504663 PPA1Q15181 289 aa8.93□□□□□ -0.98
TPM3-217ENST00000504663 MOGQ16653 247 aa8.93□□□□□ -0.98
TPM3-217ENST00000504663 IDNKQ5T6J7 187 aa8.93□□□□□ -0.98
TPM3-217ENST00000504663 HES5Q5TA89 166 aa8.93□□□□□ -0.98
TPM3-217ENST00000504663 ZBTB37Q5TC79 503 aa8.93□□□□□ -0.98
TPM3-217ENST00000504663 FBXW12Q6X9E4 464 aa8.93□□□□□ -0.98
TPM3-217ENST00000504663 SERPINA12Q8IW75 414 aa8.93□□□□□ -0.98
TPM3-217ENST00000504663 SEMA6DQ8NFY4 1073 aa8.93□□□□□ -0.98
TPM3-217ENST00000504663 OR56B2PQ8NGI1 322 aa8.93□□□□□ -0.98
TPM3-217ENST00000504663 OR4D6Q8NGJ1 314 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms