RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 OAZ3Q9UMX2 235 aa11.95□□□□□ -0.5
HOXC9-202ENST00000504557 GTF2A1LQ9UNN4 478 aa11.95□□□□□ -0.5
HOXC9-202ENST00000504557 NOP16Q9Y3C1 178 aaKnown RBP11.95□□□□□ -0.5
HOXC9-202ENST00000504557 LRP12Q9Y561 859 aa11.95□□□□□ -0.5
HOXC9-202ENST00000504557 TRAPPC2LH3BP13 241 aa11.94□□□□□ -0.5
HOXC9-202ENST00000504557 EPHA1P21709 976 aa11.94□□□□□ -0.5
HOXC9-202ENST00000504557 GNALP38405 381 aa11.94□□□□□ -0.5
HOXC9-202ENST00000504557 GSK3AP49840 483 aa11.94□□□□□ -0.5
HOXC9-202ENST00000504557 GMFBP60983 142 aa11.94□□□□□ -0.5
HOXC9-202ENST00000504557 GNB2P62879 340 aa11.94□□□□□ -0.5
HOXC9-202ENST00000504557 POU4F2Q12837 409 aa11.94□□□□□ -0.5
HOXC9-202ENST00000504557 KPNB1Q14974 876 aaKnown RBP11.94□□□□□ -0.5
HOXC9-202ENST00000504557 LIPNQ5VXI9 398 aa11.94□□□□□ -0.5
HOXC9-202ENST00000504557 LYPD2Q6UXB3 125 aa11.94□□□□□ -0.5
HOXC9-202ENST00000504557 KLBQ86Z14 1044 aa11.94□□□□□ -0.5
HOXC9-202ENST00000504557 OR8B12Q8NGG6 310 aa11.94□□□□□ -0.5
HOXC9-202ENST00000504557 OR52H1Q8NGJ2 320 aa11.94□□□□□ -0.5
HOXC9-202ENST00000504557 SSBP3Q9BWW4 388 aaPredicted RBP11.94□□□□□ -0.5
HOXC9-202ENST00000504557 RNF7Q9UBF6 113 aa11.94□□□□□ -0.5
HOXC9-202ENST00000504557 COPS3Q9UNS2 423 aa11.94□□□□□ -0.5
HOXC9-202ENST00000504557 hCG_38984A0A1B0GV85 526 aa11.93□□□□□ -0.5
HOXC9-202ENST00000504557 A0A1B0GWJ7 208 aa11.93□□□□□ -0.5
HOXC9-202ENST00000504557 ZAR1LA6NP61 321 aa11.93□□□□□ -0.5
HOXC9-202ENST00000504557 MAGEB4O15481 346 aaPredicted RBP11.93□□□□□ -0.5
HOXC9-202ENST00000504557 WNT2P09544 360 aa11.93□□□□□ -0.5
HOXC9-202ENST00000504557 ALOX5APP20292 161 aa11.93□□□□□ -0.5
HOXC9-202ENST00000504557 POLR2IP36954 125 aaKnown RBP11.93□□□□□ -0.5
HOXC9-202ENST00000504557 GATA4P43694 442 aa11.93□□□□□ -0.5
HOXC9-202ENST00000504557 PSMA6P60900 246 aaKnown RBP11.93□□□□□ -0.5
HOXC9-202ENST00000504557 ZNF404Q494X3 552 aa11.93□□□□□ -0.5
HOXC9-202ENST00000504557 SLX4IPQ5VYV7 408 aa11.93□□□□□ -0.5
HOXC9-202ENST00000504557 KDM4DQ6B0I6 523 aa11.93□□□□□ -0.5
HOXC9-202ENST00000504557 KCTD8Q6ZWB6 473 aa11.93□□□□□ -0.5
HOXC9-202ENST00000504557 ASRGL1Q7L266 308 aa11.93□□□□□ -0.5
HOXC9-202ENST00000504557 PRSS45Q7RTY3 260 aa11.93□□□□□ -0.5
HOXC9-202ENST00000504557 RFLNBQ8N5W9 214 aa11.93□□□□□ -0.5
HOXC9-202ENST00000504557 CELF2-AS1Q8N7Q2 184 aa11.93□□□□□ -0.5
HOXC9-202ENST00000504557 OR8B3Q8NGG8 313 aa11.93□□□□□ -0.5
HOXC9-202ENST00000504557 FAM81AQ8TBF8 368 aa11.93□□□□□ -0.5
HOXC9-202ENST00000504557 PIGCQ92535 297 aa11.93□□□□□ -0.5
HOXC9-202ENST00000504557 SPSB4Q96A44 273 aa11.93□□□□□ -0.5
HOXC9-202ENST00000504557 NEIL1Q96FI4 390 aaPredicted RBP11.93□□□□□ -0.5
HOXC9-202ENST00000504557 CENPNQ96H22 339 aaPredicted RBP11.93□□□□□ -0.5
HOXC9-202ENST00000504557 OR8B2Q96RD0 313 aa11.93□□□□□ -0.5
HOXC9-202ENST00000504557 CNN2Q99439 309 aaKnown RBP11.93□□□□□ -0.5
HOXC9-202ENST00000504557 TBX5Q99593 518 aa11.93□□□□□ -0.5
HOXC9-202ENST00000504557 C19orf24Q9BVV8 132 aa11.93□□□□□ -0.5
HOXC9-202ENST00000504557 YIPF3Q9GZM5 350 aa11.93□□□□□ -0.5
HOXC9-202ENST00000504557 GABARAPL1Q9H0R8 117 aa11.93□□□□□ -0.5
HOXC9-202ENST00000504557 C14orf119Q9NWQ9 140 aa11.93□□□□□ -0.5
HOXC9-202ENST00000504557 MIOXQ9UGB7 285 aa11.93□□□□□ -0.5
HOXC9-202ENST00000504557 RHBDD3Q9Y3P4 386 aa11.93□□□□□ -0.5
HOXC9-202ENST00000504557 IGHV3OR15-7A0A075B7D8 119 aa11.92□□□□□ -0.5
HOXC9-202ENST00000504557 IGHV3OR16-10A0A075B7F0 116 aa11.92□□□□□ -0.5
HOXC9-202ENST00000504557 ZNF850A8MQ14 1090 aa11.92□□□□□ -0.5
HOXC9-202ENST00000504557 PRR32B1ATL7 298 aa11.92□□□□□ -0.5
HOXC9-202ENST00000504557 F5H0A9 414 aaPredicted RBP11.92□□□□□ -0.5
HOXC9-202ENST00000504557 J3QLI3 93 aa11.92□□□□□ -0.5
HOXC9-202ENST00000504557 APOL3O95236 402 aa11.92□□□□□ -0.5
HOXC9-202ENST00000504557 CFL1P23528 166 aaKnown RBP11.92□□□□□ -0.5
HOXC9-202ENST00000504557 DDOSTP39656 456 aa11.92□□□□□ -0.5
HOXC9-202ENST00000504557 PITPNBP48739 271 aa11.92□□□□□ -0.5
HOXC9-202ENST00000504557 CSNK2BP67870 215 aa11.92□□□□□ -0.5
HOXC9-202ENST00000504557 MZT1Q08AG7 82 aa11.92□□□□□ -0.5
HOXC9-202ENST00000504557 ZNF181Q2M3W8 571 aa11.92□□□□□ -0.5
HOXC9-202ENST00000504557 ARMCX4Q5H9R4 360 aa11.92□□□□□ -0.5
HOXC9-202ENST00000504557 DMRTC1Q5HYR2 192 aa11.92□□□□□ -0.5
HOXC9-202ENST00000504557 C12orf73Q69YU5 71 aa11.92□□□□□ -0.5
HOXC9-202ENST00000504557 KCTD18Q6PI47 426 aaPredicted RBP11.92□□□□□ -0.5
HOXC9-202ENST00000504557 PLEKHG7Q6ZR37 379 aa11.92□□□□□ -0.5
HOXC9-202ENST00000504557 MEPCEQ7L2J0 689 aaKnown RBP11.92□□□□□ -0.5
HOXC9-202ENST00000504557 NLRC3Q7RTR2 1065 aa11.92□□□□□ -0.5
HOXC9-202ENST00000504557 C1QL2Q7Z5L3 287 aa11.92□□□□□ -0.5
HOXC9-202ENST00000504557 SLC35F2Q8IXU6 374 aa11.92□□□□□ -0.5
HOXC9-202ENST00000504557 NANPQ8TBE9 248 aa11.92□□□□□ -0.5
HOXC9-202ENST00000504557 TMEM163Q8TC26 289 aa11.92□□□□□ -0.5
HOXC9-202ENST00000504557 Q8TCH9 128 aa11.92□□□□□ -0.5
HOXC9-202ENST00000504557 ERGIC1Q969X5 290 aa11.92□□□□□ -0.5
HOXC9-202ENST00000504557 DUS3LQ96G46 650 aaKnown RBP11.92□□□□□ -0.5
HOXC9-202ENST00000504557 LYZL4Q96KX0 146 aa11.92□□□□□ -0.5
HOXC9-202ENST00000504557 TECTBQ96PL2 329 aa11.92□□□□□ -0.5
HOXC9-202ENST00000504557 SLC6A7Q99884 636 aa11.92□□□□□ -0.5
HOXC9-202ENST00000504557 PKP2Q99959 881 aa11.92□□□□□ -0.5
HOXC9-202ENST00000504557 MROQ9BYG7 248 aa11.92□□□□□ -0.5
HOXC9-202ENST00000504557 LRCH1Q9Y2L9 728 aa11.92□□□□□ -0.5
HOXC9-202ENST00000504557 AUP1Q9Y679 476 aa11.92□□□□□ -0.5
HOXC9-202ENST00000504557 TMEM269A0A1B0GVZ9 245 aa11.91□□□□□ -0.5
HOXC9-202ENST00000504557 GYPAP02724 150 aa11.91□□□□□ -0.5
HOXC9-202ENST00000504557 EGR1P18146 543 aa11.91□□□□□ -0.5
HOXC9-202ENST00000504557 GATA3P23771 443 aa11.91□□□□□ -0.5
HOXC9-202ENST00000504557 ACKR3P25106 362 aa11.91□□□□□ -0.5
HOXC9-202ENST00000504557 THBS2P35442 1172 aa11.91□□□□□ -0.5
HOXC9-202ENST00000504557 CXCR4P61073 352 aa11.91□□□□□ -0.5
HOXC9-202ENST00000504557 ZNF154Q13106 437 aa11.91□□□□□ -0.5
HOXC9-202ENST00000504557 PRDX4Q13162 271 aa11.91□□□□□ -0.5
HOXC9-202ENST00000504557 SCGB2A2Q13296 93 aa11.91□□□□□ -0.5
HOXC9-202ENST00000504557 RHOUQ7L0Q8 258 aa11.91□□□□□ -0.5
HOXC9-202ENST00000504557 WDR86Q86TI4 376 aa11.91□□□□□ -0.5
HOXC9-202ENST00000504557 BPIFB2Q8N4F0 458 aa11.91□□□□□ -0.5
HOXC9-202ENST00000504557 SPERTQ8NA61 448 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms