RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 CT45A2Q5DJT8 189 aa14.54□□□□□ -0.08
HMGXB3-202ENST00000503427 CT45A1Q5HYN5 189 aa14.54□□□□□ -0.08
HMGXB3-202ENST00000503427 GUSBP11Q6P575 273 aa14.54□□□□□ -0.08
HMGXB3-202ENST00000503427 ZNF573Q86YE8 665 aa14.54□□□□□ -0.08
HMGXB3-202ENST00000503427 CT45A3Q8NHU0 189 aa14.54□□□□□ -0.08
HMGXB3-202ENST00000503427 RPH3ALQ9UNE2 315 aa14.54□□□□□ -0.08
HMGXB3-202ENST00000503427 TRIP11Q15643 1979 aa14.54□□□□□ -0.08
HMGXB3-202ENST00000503427 ENSAO43768 121 aaKnown RBP14.54□□□□□ -0.08
HMGXB3-202ENST00000503427 RAB1AP62820 205 aa14.54□□□□□ -0.08
HMGXB3-202ENST00000503427 PPIAP62937 165 aaKnown RBP14.54□□□□□ -0.08
HMGXB3-202ENST00000503427 C8orf82Q6P1X6 216 aaPredicted RBP14.54□□□□□ -0.08
HMGXB3-202ENST00000503427 ZBTB44Q8NCP5 570 aa14.54□□□□□ -0.08
HMGXB3-202ENST00000503427 PPP5D1E7EU14 171 aa14.54□□□□□ -0.08
HMGXB3-202ENST00000503427 DCTN6O00399 190 aa14.54□□□□□ -0.08
HMGXB3-202ENST00000503427 CD37P11049 281 aa14.54□□□□□ -0.08
HMGXB3-202ENST00000503427 YBX1P67809 324 aaKnown RBP14.54□□□□□ -0.08
HMGXB3-202ENST00000503427 RPUSD3Q6P087 351 aaKnown RBP14.54□□□□□ -0.08
HMGXB3-202ENST00000503427 BATF2Q8N1L9 274 aa14.54□□□□□ -0.08
HMGXB3-202ENST00000503427 KTI12Q96EK9 354 aaPredicted RBP14.54□□□□□ -0.08
HMGXB3-202ENST00000503427 IL3RAP26951 378 aa14.54□□□□□ -0.08
HMGXB3-202ENST00000503427 KIR2DL1P43626 348 aaPredicted RBP14.54□□□□□ -0.08
HMGXB3-202ENST00000503427 FOXF1Q12946 379 aa14.54□□□□□ -0.08
HMGXB3-202ENST00000503427 OR8G1Q15617 311 aa14.54□□□□□ -0.08
HMGXB3-202ENST00000503427 ZNF425Q6IV72 752 aa14.54□□□□□ -0.08
HMGXB3-202ENST00000503427 TMPRSS7Q7RTY8 843 aa14.54□□□□□ -0.08
HMGXB3-202ENST00000503427 TMEM231Q9H6L2 316 aa14.54□□□□□ -0.08
HMGXB3-202ENST00000503427 C20orf141Q9NUB4 165 aa14.54□□□□□ -0.08
HMGXB3-202ENST00000503427 MED9Q9NWA0 146 aa14.54□□□□□ -0.08
HMGXB3-202ENST00000503427 LRP12Q9Y561 859 aa14.54□□□□□ -0.08
HMGXB3-202ENST00000503427 SBF2Q86WG5 1849 aa14.54□□□□□ -0.08
HMGXB3-202ENST00000503427 H7BYZ3 331 aa14.53□□□□□ -0.08
HMGXB3-202ENST00000503427 SH2D1BO14796 132 aa14.53□□□□□ -0.08
HMGXB3-202ENST00000503427 GUCA2AQ02747 115 aa14.53□□□□□ -0.08
HMGXB3-202ENST00000503427 BAMBIQ13145 260 aa14.53□□□□□ -0.08
HMGXB3-202ENST00000503427 VN1R4Q7Z5H5 301 aa14.53□□□□□ -0.08
HMGXB3-202ENST00000503427 SMRP1Q8NCR6 262 aa14.53□□□□□ -0.08
HMGXB3-202ENST00000503427 ZNF439Q8NDP4 499 aa14.53□□□□□ -0.08
HMGXB3-202ENST00000503427 OR1L3Q8NH93 324 aa14.53□□□□□ -0.08
HMGXB3-202ENST00000503427 RTN4IP1Q8WWV3 396 aaPredicted RBP14.53□□□□□ -0.08
HMGXB3-202ENST00000503427 FBXW5Q969U6 566 aa14.53□□□□□ -0.08
HMGXB3-202ENST00000503427 NIT2Q9NQR4 276 aa14.53□□□□□ -0.08
HMGXB3-202ENST00000503427 TRIOBPQ9H2D6 2365 aa14.53□□□□□ -0.08
HMGXB3-202ENST00000503427 CXCL13O43927 109 aa14.53□□□□□ -0.08
HMGXB3-202ENST00000503427 CHRNB4P30926 498 aa14.53□□□□□ -0.08
HMGXB3-202ENST00000503427 SCAND1P57086 179 aa14.53□□□□□ -0.08
HMGXB3-202ENST00000503427 DHODHQ02127 395 aa14.53□□□□□ -0.08
HMGXB3-202ENST00000503427 ZIC1Q15915 447 aa14.53□□□□□ -0.08
HMGXB3-202ENST00000503427 ELFN2Q5R3F8 820 aa14.53□□□□□ -0.08
HMGXB3-202ENST00000503427 OTPQ5XKR4 325 aa14.53□□□□□ -0.08
HMGXB3-202ENST00000503427 RIMS4Q9H426 269 aaPredicted RBP14.53□□□□□ -0.08
HMGXB3-202ENST00000503427 RP1L1Q8IWN7 2480 aaPredicted RBP14.53□□□□□ -0.08
HMGXB3-202ENST00000503427 TOX3O15405 576 aaPredicted RBP14.53□□□□□ -0.08
HMGXB3-202ENST00000503427 PTAFRP25105 342 aa14.53□□□□□ -0.08
HMGXB3-202ENST00000503427 PIGPP57054 158 aa14.53□□□□□ -0.08
HMGXB3-202ENST00000503427 ZNF626Q68DY1 528 aa14.53□□□□□ -0.08
HMGXB3-202ENST00000503427 FAM185AQ8N0U4 392 aa14.53□□□□□ -0.08
HMGXB3-202ENST00000503427 VN1R1Q9GZP7 353 aa14.53□□□□□ -0.08
HMGXB3-202ENST00000503427 SSUH2Q9Y2M2 353 aa14.53□□□□□ -0.08
HMGXB3-202ENST00000503427 TRIP12Q14669 1992 aaPredicted RBP14.53□□□□□ -0.08
HMGXB3-202ENST00000503427 LINC01387J3KSC0 135 aa14.53□□□□□ -0.08
HMGXB3-202ENST00000503427 CLN3Q13286 438 aa14.53□□□□□ -0.08
HMGXB3-202ENST00000503427 PRAMEF5Q5TYX0 476 aa14.53□□□□□ -0.08
HMGXB3-202ENST00000503427 PRAMEF6Q5VXH4 476 aa14.53□□□□□ -0.08
HMGXB3-202ENST00000503427 C11orf87Q6NUJ2 197 aa14.53□□□□□ -0.08
HMGXB3-202ENST00000503427 OR5AS1Q8N127 324 aa14.53□□□□□ -0.08
HMGXB3-202ENST00000503427 PP6455Q8WZ26 134 aa14.53□□□□□ -0.08
HMGXB3-202ENST00000503427 C11orf40Q8WZ69 217 aa14.53□□□□□ -0.08
HMGXB3-202ENST00000503427 DEFB127Q9H1M4 99 aa14.53□□□□□ -0.08
HMGXB3-202ENST00000503427 PLEKHB1Q9UF11 243 aaPredicted RBP14.53□□□□□ -0.08
HMGXB3-202ENST00000503427 MEIKINA0A087WXM9 373 aa14.52□□□□□ -0.08
HMGXB3-202ENST00000503427 TGOLN2O43493 480 aa14.52□□□□□ -0.08
HMGXB3-202ENST00000503427 SSSCA1O60232 199 aa14.52□□□□□ -0.08
HMGXB3-202ENST00000503427 THBS4P35443 961 aa14.52□□□□□ -0.08
HMGXB3-202ENST00000503427 FAM74A1Q5RGS3 127 aa14.52□□□□□ -0.08
HMGXB3-202ENST00000503427 LSRQ86X29 649 aaPredicted RBP14.52□□□□□ -0.08
HMGXB3-202ENST00000503427 AMER3Q8N944 861 aa14.52□□□□□ -0.08
HMGXB3-202ENST00000503427 CACNA1CQ13936 2221 aa14.52□□□□□ -0.08
HMGXB3-202ENST00000503427 hCG_1809904A0A1W2PP81 198 aa14.52□□□□□ -0.08
HMGXB3-202ENST00000503427 A0A1W2PPE2 198 aa14.52□□□□□ -0.08
HMGXB3-202ENST00000503427 A0A1W2PR64 198 aa14.52□□□□□ -0.08
HMGXB3-202ENST00000503427 A0A1W2PRV1 198 aa14.52□□□□□ -0.08
HMGXB3-202ENST00000503427 OR2W5A6NFC9 320 aa14.52□□□□□ -0.08
HMGXB3-202ENST00000503427 LRRC30A6NM36 301 aa14.52□□□□□ -0.08
HMGXB3-202ENST00000503427 PRRG2O14669 202 aa14.52□□□□□ -0.08
HMGXB3-202ENST00000503427 DSCR4P56555 118 aaPredicted RBP14.52□□□□□ -0.08
HMGXB3-202ENST00000503427 RPS23P62266 143 aaKnown RBP14.52□□□□□ -0.08
HMGXB3-202ENST00000503427 HAGHQ16775 308 aa14.52□□□□□ -0.08
HMGXB3-202ENST00000503427 C1orf210Q8IVY1 113 aa14.52□□□□□ -0.08
HMGXB3-202ENST00000503427 NOXO1Q8NFA2 376 aa14.52□□□□□ -0.08
HMGXB3-202ENST00000503427 RDH5Q92781 318 aa14.52□□□□□ -0.08
HMGXB3-202ENST00000503427 WDR1O75083 606 aa14.52□□□□□ -0.09
HMGXB3-202ENST00000503427 SFTPA1Q8IWL2 248 aa14.52□□□□□ -0.09
HMGXB3-202ENST00000503427 ANGPTL6Q8NI99 470 aa14.52□□□□□ -0.09
HMGXB3-202ENST00000503427 C2CD4CQ8TF44 421 aa14.52□□□□□ -0.09
HMGXB3-202ENST00000503427 MITD1Q8WV92 249 aa14.52□□□□□ -0.09
HMGXB3-202ENST00000503427 TXN2Q99757 166 aa14.52□□□□□ -0.09
HMGXB3-202ENST00000503427 ADGRL4Q9HBW9 690 aa14.52□□□□□ -0.09
HMGXB3-202ENST00000503427 LIN7CQ9NUP9 197 aaKnown RBP14.52□□□□□ -0.09
HMGXB3-202ENST00000503427 PPP1R14DQ9NXH3 145 aa14.52□□□□□ -0.09
HMGXB3-202ENST00000503427 OSGIN2Q9Y236 505 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms