RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 FOLR1P15328 257 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 GGT1P19440 569 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 HLA-DMAP28067 261 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 GNRHRP30968 328 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 FMO3P31513 532 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 EVI2BP34910 448 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 PFN2P35080 140 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 ACTR1BP42025 376 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 CDKN2CP42773 168 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 MAGEA3P43357 314 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 VDAC2P45880 294 aaPredicted RBP1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 SERPINB8P50452 374 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 DLX1P56177 255 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 ZNF121P58317 390 aaPredicted RBP1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 TAS2R19P59542 299 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 MRPS25P82663 173 aaKnown RBP1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 HMGCS1Q01581 520 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 SEMG2Q02383 582 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 CKAP4Q07065 602 aaKnown RBP1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 C2orf54Q08AI8 447 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 STX4Q12846 297 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 DAZ2Q13117 558 aaKnown RBP1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 STX5Q13190 355 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 DYNC1I2Q13409 638 aaKnown RBP1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 QPRTQ15274 297 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 COQ5Q5HYK3 327 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 TIMM23BQ5SRD1 257 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 CCNJQ5T5M9 372 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 NPSR1Q6W5P4 371 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 ZNF620Q6ZNG0 422 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 MTERF4Q7Z6M4 381 aaKnown RBP1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 MRPL55Q7Z7F7 128 aaKnown RBP1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 TMEM25Q86YD3 366 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 FUNDC1Q8IVP5 155 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 FAM71AQ8IYT1 594 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 CYP4Z2PQ8N1L4 340 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 CBR4Q8N4T8 237 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 TMEM251Q8N6I4 163 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 LRRC52Q8N7C0 313 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 SUMF2Q8NBJ7 301 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 MDS2Q8NDY4 140 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 OR52E2Q8NGJ4 325 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 OR1N2Q8NGR9 330 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 OR10Z1Q8NGY1 313 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 OR9G1Q8NH87 305 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 NEIL3Q8TAT5 605 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 ARPC1AQ92747 370 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 PPWD1Q96BP3 646 aaKnown RBP1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 S100PBPQ96BU1 408 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 SGTBQ96EQ0 304 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 RBBP8Q99708 897 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 PDCD1LG2Q9BQ51 273 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 RSG1Q9BU20 258 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 DERL2Q9GZP9 239 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 CHRNA10Q9GZZ6 450 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 SRMSQ9H3Y6 488 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 ZNF442Q9H7R0 627 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 ZDHHC4Q9NPG8 344 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 ACOT13Q9NPJ3 140 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 ASCL3Q9NQ33 180 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 DAZ3Q9NR90 486 aaKnown RBP1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 SPANXB1Q9NS25 103 aaPredicted RBP1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 SLC25A37Q9NYZ2 338 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 XCL2Q9UBD3 114 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 ATPIF1Q9UII2 106 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 RAB23Q9ULC3 237 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 AP3M1Q9Y2T2 418 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 PRG3Q9Y2Y8 225 aaPredicted RBP1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 FHOD3Q2V2M9 1422 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 ELP1O95163 1332 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 MAP3K15Q6ZN16 1313 aa1.64□□□□□ -2.15
HMGB1P35-201ENST00000503360 GTF3C1Q12789 2109 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 A0A0B4J2E0 115 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 A0A1B0GX12 115 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 A0A1W2PRG6 482 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 WI2-2373I1.2A0A1W2PRP0 233 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 GJE1A6NN92 205 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 TRIM49D1C9J1S8 452 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 PANO1I0J062 215 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 M0R036 132 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 M0R1B8 84 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 SLC31A1O15431 190 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 FABP7O15540 132 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 CRXO43186 299 aaPredicted RBP1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 TRAF3IP2O43734 574 aaPredicted RBP1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 CYTH3O43739 400 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 PSIP1O75475 530 aaKnown RBP1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 RBBP9O75884 186 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 PSMG1O95456 288 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 SNAP29O95721 258 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 RAB36O95755 333 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 APOEP02649 317 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 GIPP09681 153 aaPredicted RBP1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 GKN3PP0CG01 181 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 PGA5P0DJD9 388 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 LIPCP11150 499 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 HIST1H1CP16403 213 aaKnown RBP1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 MAGP20916 626 aa1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 USF1P22415 310 aaPredicted RBP1.63□□□□□ -2.15
HMGB1P35-201ENST00000503360 CCNE1P24864 410 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms