RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 ZNF391Q9UJN7 358 aa5.03□□□□□ -1.6
LSM3P4-201ENST00000502948 PLXNB1O43157 2135 aa5.02□□□□□ -1.61
LSM3P4-201ENST00000502948 A0A0U1RQK1 487 aa5.02□□□□□ -1.61
LSM3P4-201ENST00000502948 BTBD17A6NE02 478 aa5.02□□□□□ -1.61
LSM3P4-201ENST00000502948 GGT3PA6NGU5 568 aa5.02□□□□□ -1.61
LSM3P4-201ENST00000502948 TMEM210A6NLX4 147 aa5.02□□□□□ -1.61
LSM3P4-201ENST00000502948 ANKRD30BLA7E2S9 258 aa5.02□□□□□ -1.61
LSM3P4-201ENST00000502948 ZNF878C9JN71 531 aa5.02□□□□□ -1.61
LSM3P4-201ENST00000502948 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.02□□□□□ -1.61
LSM3P4-201ENST00000502948 OR10H3O60404 316 aa5.02□□□□□ -1.61
LSM3P4-201ENST00000502948 IGHV4-59P01825 116 aa5.02□□□□□ -1.61
LSM3P4-201ENST00000502948 EEF1B2P24534 225 aaKnown RBP5.02□□□□□ -1.61
LSM3P4-201ENST00000502948 RBMXP38159 391 aaKnown RBP5.02□□□□□ -1.61
LSM3P4-201ENST00000502948 MAGEA2P43356 314 aa5.02□□□□□ -1.61
LSM3P4-201ENST00000502948 KIR2DS4P43632 304 aa5.02□□□□□ -1.61
LSM3P4-201ENST00000502948 UBE2E1P51965 193 aa5.02□□□□□ -1.61
LSM3P4-201ENST00000502948 SLC25A1P53007 311 aa5.02□□□□□ -1.61
LSM3P4-201ENST00000502948 CAV3P56539 151 aa5.02□□□□□ -1.61
LSM3P4-201ENST00000502948 KRTAP10-3P60369 221 aa5.02□□□□□ -1.61
LSM3P4-201ENST00000502948 PSME3P61289 254 aa5.02□□□□□ -1.61
LSM3P4-201ENST00000502948 FAM3AP98173 230 aa5.02□□□□□ -1.61
LSM3P4-201ENST00000502948 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.02□□□□□ -1.61
LSM3P4-201ENST00000502948 HNRNPA0Q13151 305 aaKnown RBP5.02□□□□□ -1.61
LSM3P4-201ENST00000502948 OR8B8Q15620 311 aa5.02□□□□□ -1.61
LSM3P4-201ENST00000502948 GLYATL3Q5SZD4 288 aa5.02□□□□□ -1.61
LSM3P4-201ENST00000502948 RUSC1-AS1Q66K80 236 aa5.02□□□□□ -1.61
LSM3P4-201ENST00000502948 SFRP4Q6FHJ7 346 aaPredicted RBP5.02□□□□□ -1.61
LSM3P4-201ENST00000502948 WDR82Q6UXN9 313 aa5.02□□□□□ -1.61
LSM3P4-201ENST00000502948 ZNF788Q6ZQV5 615 aa5.02□□□□□ -1.61
LSM3P4-201ENST00000502948 LIAT1Q6ZQX7 453 aa5.02□□□□□ -1.61
LSM3P4-201ENST00000502948 RASSF6Q6ZTQ3 369 aa5.02□□□□□ -1.61
LSM3P4-201ENST00000502948 PRSS45Q7RTY3 260 aa5.02□□□□□ -1.61
LSM3P4-201ENST00000502948 LINC00346Q8IVM7 164 aa5.02□□□□□ -1.61
LSM3P4-201ENST00000502948 FAM86B1Q8N7N1 296 aa5.02□□□□□ -1.61
LSM3P4-201ENST00000502948 BEND2Q8NDZ0 799 aa5.02□□□□□ -1.61
LSM3P4-201ENST00000502948 OR1M1Q8NGA1 313 aa5.02□□□□□ -1.61
LSM3P4-201ENST00000502948 OR52L1Q8NGH7 329 aa5.02□□□□□ -1.61
LSM3P4-201ENST00000502948 OR4K13Q8NH42 304 aa5.02□□□□□ -1.61
LSM3P4-201ENST00000502948 GNPDA2Q8TDQ7 276 aa5.02□□□□□ -1.61
LSM3P4-201ENST00000502948 TNFRSF14Q92956 283 aa5.02□□□□□ -1.61
LSM3P4-201ENST00000502948 UBE2FQ969M7 185 aa5.02□□□□□ -1.61
LSM3P4-201ENST00000502948 MCUR1Q96AQ8 359 aa5.02□□□□□ -1.61
LSM3P4-201ENST00000502948 DCTN5Q9BTE1 182 aa5.02□□□□□ -1.61
LSM3P4-201ENST00000502948 IFT27Q9BW83 186 aa5.02□□□□□ -1.61
LSM3P4-201ENST00000502948 CDCA4Q9BXL8 241 aa5.02□□□□□ -1.61
LSM3P4-201ENST00000502948 MYLK2Q9H1R3 596 aa5.02□□□□□ -1.61
LSM3P4-201ENST00000502948 MEGF9Q9H1U4 602 aa5.02□□□□□ -1.61
LSM3P4-201ENST00000502948 MMADHCQ9H3L0 296 aaPredicted RBP5.02□□□□□ -1.61
LSM3P4-201ENST00000502948 METTL8Q9H825 291 aaKnown RBP5.02□□□□□ -1.61
LSM3P4-201ENST00000502948 UFSP2Q9NUQ7 469 aa5.02□□□□□ -1.61
LSM3P4-201ENST00000502948 C1orf123Q9NWV4 160 aa5.02□□□□□ -1.61
LSM3P4-201ENST00000502948 MAGEL2Q9UJ55 1249 aa5.02□□□□□ -1.61
LSM3P4-201ENST00000502948 LRP12Q9Y561 859 aa5.02□□□□□ -1.61
LSM3P4-201ENST00000502948 MPC1Q9Y5U8 109 aa5.02□□□□□ -1.61
LSM3P4-201ENST00000502948 CDH10Q9Y6N8 788 aa5.02□□□□□ -1.61
LSM3P4-201ENST00000502948 COMMD3-BMI1R4GMX3 469 aa5.02□□□□□ -1.61
LSM3P4-201ENST00000502948 TRBV23-1A0A0A0MS06 115 aa5.01□□□□□ -1.61
LSM3P4-201ENST00000502948 hCG_38984A0A1B0GV85 526 aa5.01□□□□□ -1.61
LSM3P4-201ENST00000502948 C3orf80F5H4A9 247 aa5.01□□□□□ -1.61
LSM3P4-201ENST00000502948 NDUFB3O43676 98 aa5.01□□□□□ -1.61
LSM3P4-201ENST00000502948 SASH3O75995 380 aa5.01□□□□□ -1.61
LSM3P4-201ENST00000502948 CST4P01036 141 aa5.01□□□□□ -1.61
LSM3P4-201ENST00000502948 HLA-DQA2P01906 255 aa5.01□□□□□ -1.61
LSM3P4-201ENST00000502948 FABP3P05413 133 aa5.01□□□□□ -1.61
LSM3P4-201ENST00000502948 FMO3P31513 532 aa5.01□□□□□ -1.61
LSM3P4-201ENST00000502948 ENTPD1P49961 510 aa5.01□□□□□ -1.61
LSM3P4-201ENST00000502948 NUDT2P50583 147 aa5.01□□□□□ -1.61
LSM3P4-201ENST00000502948 ARF6P62330 175 aa5.01□□□□□ -1.61
LSM3P4-201ENST00000502948 MXRA7P84157 204 aa5.01□□□□□ -1.61
LSM3P4-201ENST00000502948 IL5RAQ01344 420 aa5.01□□□□□ -1.61
LSM3P4-201ENST00000502948 SPIBQ01892 262 aa5.01□□□□□ -1.61
LSM3P4-201ENST00000502948 SRSF4Q08170 494 aaKnown RBP5.01□□□□□ -1.61
LSM3P4-201ENST00000502948 LRRC10Q5BKY1 277 aa5.01□□□□□ -1.61
LSM3P4-201ENST00000502948 OTPQ5XKR4 325 aa5.01□□□□□ -1.61
LSM3P4-201ENST00000502948 STUMQ69YW2 141 aa5.01□□□□□ -1.61
LSM3P4-201ENST00000502948 DHRS7BQ6IAN0 325 aaPredicted RBP5.01□□□□□ -1.61
LSM3P4-201ENST00000502948 ZNF770Q6IQ21 691 aaPredicted RBP5.01□□□□□ -1.61
LSM3P4-201ENST00000502948 PGBD2Q6P3X8 592 aa5.01□□□□□ -1.61
LSM3P4-201ENST00000502948 CD300LDQ6UXZ3 194 aa5.01□□□□□ -1.61
LSM3P4-201ENST00000502948 SLC16A9Q7RTY1 509 aa5.01□□□□□ -1.61
LSM3P4-201ENST00000502948 DCXRQ7Z4W1 244 aa5.01□□□□□ -1.61
LSM3P4-201ENST00000502948 VMO1Q7Z5L0 202 aa5.01□□□□□ -1.61
LSM3P4-201ENST00000502948 Q8N7P7 452 aa5.01□□□□□ -1.61
LSM3P4-201ENST00000502948 SCCPDHQ8NBX0 429 aa5.01□□□□□ -1.61
LSM3P4-201ENST00000502948 PAPD5Q8NDF8 572 aaKnown RBP5.01□□□□□ -1.61
LSM3P4-201ENST00000502948 SDR9C7Q8NEX9 313 aa5.01□□□□□ -1.61
LSM3P4-201ENST00000502948 PROKR2Q8NFJ6 384 aa5.01□□□□□ -1.61
LSM3P4-201ENST00000502948 OR56B2PQ8NGI1 322 aa5.01□□□□□ -1.61
LSM3P4-201ENST00000502948 OR8S1Q8NH09 359 aa5.01□□□□□ -1.61
LSM3P4-201ENST00000502948 OR52J3Q8NH60 311 aa5.01□□□□□ -1.61
LSM3P4-201ENST00000502948 OR2AE1Q8NHA4 323 aa5.01□□□□□ -1.61
LSM3P4-201ENST00000502948 RNF133Q8WVZ7 376 aa5.01□□□□□ -1.61
LSM3P4-201ENST00000502948 CFHR4Q92496 578 aa5.01□□□□□ -1.61
LSM3P4-201ENST00000502948 LHX4Q969G2 390 aa5.01□□□□□ -1.61
LSM3P4-201ENST00000502948 PPP1R14AQ96A00 147 aa5.01□□□□□ -1.61
LSM3P4-201ENST00000502948 SGK3Q96BR1 496 aa5.01□□□□□ -1.61
LSM3P4-201ENST00000502948 SLAMF6Q96DU3 332 aa5.01□□□□□ -1.61
LSM3P4-201ENST00000502948 ITPKCQ96DU7 683 aa5.01□□□□□ -1.61
LSM3P4-201ENST00000502948 MED30Q96HR3 178 aa5.01□□□□□ -1.61
LSM3P4-201ENST00000502948 RAB3IPQ96QF0 476 aaPredicted RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms