RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 DGCR14Q96DF8 476 aaKnown RBP3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 PACRGQ96M98 296 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 RNF157Q96PX1 679 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 SORT1Q99523 831 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 PKMYT1Q99640 499 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 SYT15Q9BQS2 421 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 TMEM204Q9BSN7 226 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 TMEM109Q9BVC6 243 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 CENPHQ9H3R5 247 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 LIME1Q9H400 295 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 WDR41Q9HAD4 459 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 CTPS2Q9NRF8 586 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 SDHAF2Q9NX18 166 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 OR12D3Q9UGF7 316 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 CLEC4EQ9ULY5 219 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 TFR2Q9UP52 801 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 SNX24Q9Y343 169 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 MRPS18CQ9Y3D5 142 aaKnown RBP3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 WIF1Q9Y5W5 379 aa3.54□□□□□ -1.84
HMGB1P21-201ENST00000502313 PTPRJQ12913 1337 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 ANKRD20A5PA0PJZ0 165 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 MSGN1A6NI15 193 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 SMIM23A6NLE4 172 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 SLCO1B7G3V0H7 640 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 J3QLI3 93 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 CDC7O00311 574 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 RAD51CO43502 376 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 UGT1A9O60656 530 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 EEDO75530 441 aaKnown RBP3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 CEACAM4O75871 244 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 RAB3DO95716 219 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 IFNA5P01569 189 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 APOEP02649 317 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 TACSTD2P09758 323 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 OCM2P0CE71 109 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 BCL3P20749 454 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 IL12AP29459 219 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 HSPA9P38646 679 aaKnown RBP3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 PTGDSP41222 190 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 CDKN2BP42772 138 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 CAPZBP47756 277 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 TFPI2P48307 235 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 HILS1P60008 231 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 RND3P61587 244 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 STXBP1P61764 594 aaKnown RBP3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 RPL31P62899 125 aaKnown RBP3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 PRKCDQ05655 676 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 C2orf54Q08AI8 447 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 CDC20Q12834 499 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 TSPAN31Q12999 210 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 ECH1Q13011 328 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 IL18R1Q13478 541 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 CYP51A1Q16850 503 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 PGGHGQ32M88 737 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 PIGGQ5H8A4 983 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 TECRLQ5HYJ1 363 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 TIMM23BQ5SRD1 257 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 TRIM40Q6P9F5 258 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 CHMP1BQ7LBR1 199 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 PTAR1Q7Z6K3 402 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 PIANPQ8IYJ0 282 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 HS3ST5Q8IZT8 346 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 VKORC1L1Q8N0U8 176 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 RIBC1Q8N443 379 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 WDR31Q8NA23 367 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 DUSP18Q8NEJ0 188 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 ATP6V1C2Q8NEY4 427 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 OR2T11Q8NH01 316 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 OR2T6Q8NHC8 308 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 SPPL2AQ8TCT8 520 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 SFXN5Q8TD22 340 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 FAM172AQ8WUF8 416 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 SECTM1Q8WVN6 248 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 DYDC1Q8WWB3 177 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 C1orf54Q8WWF1 131 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 NTAN1Q96AB6 310 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 EEF1AKMT3Q96AZ1 226 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 RNF145Q96MT1 663 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 KRTAP17-1Q9BYP8 105 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 DHX35Q9H5Z1 703 aaKnown RBP3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 GAREM1Q9H706 876 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 ELL3Q9HB65 397 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 HRASLSQ9HDD0 168 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 ASCL3Q9NQ33 180 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 ZNF446Q9NWS9 450 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 MMP17Q9ULZ9 603 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 FBXO7Q9Y3I1 522 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 RPL36Q9Y3U8 105 aaKnown RBP3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 TIMM22Q9Y584 194 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 HEY1Q9Y5J3 304 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 CPQQ9Y646 472 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 ANK1P16157 1881 aa3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 PDCD11Q14690 1871 aaKnown RBP3.53□□□□□ -1.84
HMGB1P21-201ENST00000502313 TRIP11Q15643 1979 aa3.52□□□□□ -1.85
HMGB1P21-201ENST00000502313 NCOR2Q9Y618 2525 aa3.52□□□□□ -1.85
HMGB1P21-201ENST00000502313 MN1Q10571 1320 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P21-201ENST00000502313 TSC2P49815 1807 aa3.52□□□□□ -1.85
HMGB1P21-201ENST00000502313 hCG_1818297A0A087WSY0 165 aa3.52□□□□□ -1.85
HMGB1P21-201ENST00000502313 SAA2-SAA4A0A096LPE2 208 aa3.52□□□□□ -1.85
HMGB1P21-201ENST00000502313 A0A1W2PQL4 384 aaPredicted RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms