RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 NOTCH3Q9UM47 2321 aa12.02□□□□□ -0.49
TRAF4-212ENST00000498540 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.02□□□□□ -0.49
TRAF4-212ENST00000498540 MEIOCA2RUB1 952 aa12.02□□□□□ -0.49
TRAF4-212ENST00000498540 NME4O00746 187 aa12.02□□□□□ -0.49
TRAF4-212ENST00000498540 ACOT8O14734 319 aa12.02□□□□□ -0.49
TRAF4-212ENST00000498540 GSTA4O15217 222 aa12.02□□□□□ -0.49
TRAF4-212ENST00000498540 PAHP00439 452 aa12.02□□□□□ -0.49
TRAF4-212ENST00000498540 SLC2A1P11166 492 aa12.02□□□□□ -0.49
TRAF4-212ENST00000498540 SELLP14151 372 aa12.02□□□□□ -0.49
TRAF4-212ENST00000498540 MUC1P15941 1255 aaPredicted RBP12.02□□□□□ -0.49
TRAF4-212ENST00000498540 CSNK2BP67870 215 aa12.02□□□□□ -0.49
TRAF4-212ENST00000498540 IKZF1Q13422 519 aa12.02□□□□□ -0.49
TRAF4-212ENST00000498540 MICBQ29980 383 aa12.02□□□□□ -0.49
TRAF4-212ENST00000498540 SDR9C7Q8NEX9 313 aa12.02□□□□□ -0.49
TRAF4-212ENST00000498540 OR52J3Q8NH60 311 aa12.02□□□□□ -0.49
TRAF4-212ENST00000498540 CFHR4Q92496 578 aa12.02□□□□□ -0.49
TRAF4-212ENST00000498540 FUZQ9BT04 418 aa12.02□□□□□ -0.49
TRAF4-212ENST00000498540 DCTN5Q9BTE1 182 aa12.02□□□□□ -0.49
TRAF4-212ENST00000498540 OR52D1Q9H346 318 aa12.02□□□□□ -0.49
TRAF4-212ENST00000498540 C14orf119Q9NWQ9 140 aa12.02□□□□□ -0.49
TRAF4-212ENST00000498540 NDUFAF4Q9P032 175 aa12.02□□□□□ -0.49
TRAF4-212ENST00000498540 PRPF19Q9UMS4 504 aaKnown RBP12.02□□□□□ -0.49
TRAF4-212ENST00000498540 H3BUX3 64 aa12.01□□□□□ -0.49
TRAF4-212ENST00000498540 ARPC3O15145 178 aa12.01□□□□□ -0.49
TRAF4-212ENST00000498540 DIRAS1O95057 198 aa12.01□□□□□ -0.49
TRAF4-212ENST00000498540 NCK1P16333 377 aa12.01□□□□□ -0.49
TRAF4-212ENST00000498540 AMY2BP19961 511 aa12.01□□□□□ -0.49
TRAF4-212ENST00000498540 SLC6A6P31641 620 aa12.01□□□□□ -0.49
TRAF4-212ENST00000498540 OXLD1Q5BKU9 147 aa12.01□□□□□ -0.49
TRAF4-212ENST00000498540 LYPD4Q6UWN0 246 aa12.01□□□□□ -0.49
TRAF4-212ENST00000498540 DRAM2Q6UX65 266 aa12.01□□□□□ -0.49
TRAF4-212ENST00000498540 WDR82Q6UXN9 313 aa12.01□□□□□ -0.49
TRAF4-212ENST00000498540 SLC36A1Q7Z2H8 476 aa12.01□□□□□ -0.49
TRAF4-212ENST00000498540 ARPINQ7Z6K5 226 aa12.01□□□□□ -0.49
TRAF4-212ENST00000498540 KLHDC1Q8N7A1 406 aa12.01□□□□□ -0.49
TRAF4-212ENST00000498540 C8orf46Q8TAG6 207 aa12.01□□□□□ -0.49
TRAF4-212ENST00000498540 C17orf50Q8WW18 174 aa12.01□□□□□ -0.49
TRAF4-212ENST00000498540 ITPKCQ96DU7 683 aa12.01□□□□□ -0.49
TRAF4-212ENST00000498540 IFT27Q9BW83 186 aa12.01□□□□□ -0.49
TRAF4-212ENST00000498540 NSRP1Q9H0G5 558 aaKnown RBP12.01□□□□□ -0.49
TRAF4-212ENST00000498540 RNPEPL1Q9HAU8 725 aa12.01□□□□□ -0.49
TRAF4-212ENST00000498540 KRCC1Q9NPI7 259 aaPredicted RBP12.01□□□□□ -0.49
TRAF4-212ENST00000498540 MRGBPQ9NV56 204 aa12.01□□□□□ -0.49
TRAF4-212ENST00000498540 AP3M1Q9Y2T2 418 aa12.01□□□□□ -0.49
TRAF4-212ENST00000498540 KMT2CQ8NEZ4 4911 aaKnown RBP12□□□□□ -0.49
TRAF4-212ENST00000498540 TVP23AA6NH52 213 aa12□□□□□ -0.49
TRAF4-212ENST00000498540 NDUFB3O43676 98 aa12□□□□□ -0.49
TRAF4-212ENST00000498540 TFF1P04155 84 aa12□□□□□ -0.49
TRAF4-212ENST00000498540 RHCEP18577 417 aa12□□□□□ -0.49
TRAF4-212ENST00000498540 PYCR1P32322 319 aa12□□□□□ -0.49
TRAF4-212ENST00000498540 GSK3BP49841 420 aa12□□□□□ -0.49
TRAF4-212ENST00000498540 PRKXP51817 358 aa12□□□□□ -0.49
TRAF4-212ENST00000498540 SLC7A2P52569 658 aa12□□□□□ -0.49
TRAF4-212ENST00000498540 LOXL3P58215 753 aa12□□□□□ -0.49
TRAF4-212ENST00000498540 MZT1Q08AG7 82 aa12□□□□□ -0.49
TRAF4-212ENST00000498540 LY6EQ16553 131 aa12□□□□□ -0.49
TRAF4-212ENST00000498540 DPY19L4Q7Z388 723 aa12□□□□□ -0.49
TRAF4-212ENST00000498540 LYG1Q8N1E2 194 aa12□□□□□ -0.49
TRAF4-212ENST00000498540 OR1M1Q8NGA1 313 aa12□□□□□ -0.49
TRAF4-212ENST00000498540 OR5T2Q8NGG2 359 aa12□□□□□ -0.49
TRAF4-212ENST00000498540 OR8S1Q8NH09 359 aa12□□□□□ -0.49
TRAF4-212ENST00000498540 H1FXQ92522 213 aaKnown RBP12□□□□□ -0.49
TRAF4-212ENST00000498540 FAM162AQ96A26 154 aa12□□□□□ -0.49
TRAF4-212ENST00000498540 DHRS1Q96LJ7 313 aa12□□□□□ -0.49
TRAF4-212ENST00000498540 DMRTB1Q96MA1 342 aa12□□□□□ -0.49
TRAF4-212ENST00000498540 PPP1R3EQ9H7J1 279 aa12□□□□□ -0.49
TRAF4-212ENST00000498540 KCNG2Q9UJ96 466 aa12□□□□□ -0.49
TRAF4-212ENST00000498540 FAM32AQ9Y421 112 aaKnown RBP12□□□□□ -0.49
TRAF4-212ENST00000498540 N6AMT1Q9Y5N5 214 aa12□□□□□ -0.49
TRAF4-212ENST00000498540 CAPN7Q9Y6W3 813 aa12□□□□□ -0.49
TRAF4-212ENST00000498540 ANKRD30BLA7E2S9 258 aa11.99□□□□□ -0.49
TRAF4-212ENST00000498540 HMGB1P1B2RPK0 211 aaPredicted RBP11.99□□□□□ -0.49
TRAF4-212ENST00000498540 ZNF823P16415 610 aa11.99□□□□□ -0.49
TRAF4-212ENST00000498540 NOS3P29474 1203 aa11.99□□□□□ -0.49
TRAF4-212ENST00000498540 GRK5P34947 590 aa11.99□□□□□ -0.49
TRAF4-212ENST00000498540 KIR2DS4P43632 304 aa11.99□□□□□ -0.49
TRAF4-212ENST00000498540 TGM4P49221 684 aa11.99□□□□□ -0.49
TRAF4-212ENST00000498540 UBE2E1P51965 193 aa11.99□□□□□ -0.49
TRAF4-212ENST00000498540 LRRC10Q5BKY1 277 aa11.99□□□□□ -0.49
TRAF4-212ENST00000498540 SLC35F1Q5T1Q4 408 aa11.99□□□□□ -0.49
TRAF4-212ENST00000498540 STUMQ69YW2 141 aa11.99□□□□□ -0.49
TRAF4-212ENST00000498540 CGB2Q6NT52 195 aa11.99□□□□□ -0.49
TRAF4-212ENST00000498540 DCXRQ7Z4W1 244 aa11.99□□□□□ -0.49
TRAF4-212ENST00000498540 FAM86B1Q8N7N1 296 aa11.99□□□□□ -0.49
TRAF4-212ENST00000498540 BEND2Q8NDZ0 799 aa11.99□□□□□ -0.49
TRAF4-212ENST00000498540 OR4C13Q8NGP0 309 aa11.99□□□□□ -0.49
TRAF4-212ENST00000498540 ZNRF4Q8WWF5 429 aa11.99□□□□□ -0.49
TRAF4-212ENST00000498540 RORBQ92753 470 aa11.99□□□□□ -0.49
TRAF4-212ENST00000498540 PPP1R14AQ96A00 147 aa11.99□□□□□ -0.49
TRAF4-212ENST00000498540 SPSB4Q96A44 273 aa11.99□□□□□ -0.49
TRAF4-212ENST00000498540 C7orf34Q96L11 122 aa11.99□□□□□ -0.49
TRAF4-212ENST00000498540 SSX3Q99909 188 aa11.99□□□□□ -0.49
TRAF4-212ENST00000498540 COPS4Q9BT78 406 aa11.99□□□□□ -0.49
TRAF4-212ENST00000498540 OPA3Q9H6K4 179 aa11.99□□□□□ -0.49
TRAF4-212ENST00000498540 AURKAIP1Q9NWT8 199 aaPredicted RBP11.99□□□□□ -0.49
TRAF4-212ENST00000498540 DNAH3Q8TD57 4116 aa11.99□□□□□ -0.49
TRAF4-212ENST00000498540 MEGF11A6BM72 1044 aa11.98□□□□□ -0.49
TRAF4-212ENST00000498540 XRCC2O43543 280 aa11.98□□□□□ -0.49
TRAF4-212ENST00000498540 VSIG10L2P0DP72 767 aa11.98□□□□□ -0.49
TRAF4-212ENST00000498540 PAX6P26367 422 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms