RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 KCTD21Q4G0X4 260 aa10.15□□□□□ -0.78
CUX1-210ENST00000497815 CCDC58Q4VC31 144 aa10.15□□□□□ -0.78
CUX1-210ENST00000497815 RPL22L1Q6P5R6 122 aaKnown RBP10.15□□□□□ -0.78
CUX1-210ENST00000497815 Q6ZR03 302 aa10.15□□□□□ -0.78
CUX1-210ENST00000497815 DOK3Q7L591 496 aa10.15□□□□□ -0.78
CUX1-210ENST00000497815 EGFL6Q8IUX8 553 aa10.15□□□□□ -0.78
CUX1-210ENST00000497815 SPARTQ8N0X7 666 aa10.15□□□□□ -0.78
CUX1-210ENST00000497815 SEMA6DQ8NFY4 1073 aa10.15□□□□□ -0.78
CUX1-210ENST00000497815 OR2Z1Q8NG97 314 aa10.15□□□□□ -0.78
CUX1-210ENST00000497815 OR10AD1Q8NGE0 317 aa10.15□□□□□ -0.78
CUX1-210ENST00000497815 OR10AC1Q8NH08 325 aa10.15□□□□□ -0.78
CUX1-210ENST00000497815 OR5AK2Q8NH90 309 aa10.15□□□□□ -0.78
CUX1-210ENST00000497815 HAVCR2Q8TDQ0 301 aa10.15□□□□□ -0.78
CUX1-210ENST00000497815 IGFBPL1Q8WX77 278 aa10.15□□□□□ -0.78
CUX1-210ENST00000497815 DVL3Q92997 716 aaPredicted RBP10.15□□□□□ -0.78
CUX1-210ENST00000497815 PERPQ96FX8 193 aa10.15□□□□□ -0.78
CUX1-210ENST00000497815 COMMD4Q9H0A8 199 aa10.15□□□□□ -0.78
CUX1-210ENST00000497815 CYSLTR2Q9NS75 346 aa10.15□□□□□ -0.78
CUX1-210ENST00000497815 PIGLQ9Y2B2 252 aa10.15□□□□□ -0.78
CUX1-210ENST00000497815 LSM2Q9Y333 95 aaKnown RBP10.15□□□□□ -0.78
CUX1-210ENST00000497815 TMEM212A6NML5 194 aa10.14□□□□□ -0.79
CUX1-210ENST00000497815 ANKRD30BLA7E2S9 258 aa10.14□□□□□ -0.79
CUX1-210ENST00000497815 C17orf100A8MU93 164 aa10.14□□□□□ -0.79
CUX1-210ENST00000497815 H0YL77 283 aa10.14□□□□□ -0.79
CUX1-210ENST00000497815 OVOL3O00110 214 aa10.14□□□□□ -0.79
CUX1-210ENST00000497815 OGG1O15527 345 aa10.14□□□□□ -0.79
CUX1-210ENST00000497815 TPD52L2O43399 206 aaKnown RBP10.14□□□□□ -0.79
CUX1-210ENST00000497815 MTRF1O75570 445 aaKnown RBP10.14□□□□□ -0.79
CUX1-210ENST00000497815 DHRS3O75911 302 aa10.14□□□□□ -0.79
CUX1-210ENST00000497815 IGLV3-1P01715 115 aa10.14□□□□□ -0.79
CUX1-210ENST00000497815 IGHV1-46P01743 117 aa10.14□□□□□ -0.79
CUX1-210ENST00000497815 FAHP16930 419 aa10.14□□□□□ -0.79
CUX1-210ENST00000497815 CELP19835 753 aa10.14□□□□□ -0.79
CUX1-210ENST00000497815 DDOSTP39656 456 aa10.14□□□□□ -0.79
CUX1-210ENST00000497815 MAGEB1P43366 347 aa10.14□□□□□ -0.79
CUX1-210ENST00000497815 TAS2R43P59537 309 aa10.14□□□□□ -0.79
CUX1-210ENST00000497815 EMX1Q04741 257 aaPredicted RBP10.14□□□□□ -0.79
CUX1-210ENST00000497815 RIPPLY1Q0D2K3 151 aa10.14□□□□□ -0.79
CUX1-210ENST00000497815 OR8G1Q15617 311 aa10.14□□□□□ -0.79
CUX1-210ENST00000497815 OR8B8Q15620 311 aa10.14□□□□□ -0.79
CUX1-210ENST00000497815 ZMAT1Q5H9K5 638 aa10.14□□□□□ -0.79
CUX1-210ENST00000497815 TMEM244Q5VVB8 128 aa10.14□□□□□ -0.79
CUX1-210ENST00000497815 ZNF773Q6PK81 442 aa10.14□□□□□ -0.79
CUX1-210ENST00000497815 SVOPQ8N4V2 548 aa10.14□□□□□ -0.79
CUX1-210ENST00000497815 OR13G1Q8NGZ3 307 aa10.14□□□□□ -0.79
CUX1-210ENST00000497815 PIGCQ92535 297 aa10.14□□□□□ -0.79
CUX1-210ENST00000497815 SMIM19Q96E16 107 aa10.14□□□□□ -0.79
CUX1-210ENST00000497815 SORCS2Q96PQ0 1159 aa10.14□□□□□ -0.79
CUX1-210ENST00000497815 PAPOLGQ9BWT3 736 aaKnown RBP10.14□□□□□ -0.79
CUX1-210ENST00000497815 RAB1BQ9H0U4 201 aa10.14□□□□□ -0.79
CUX1-210ENST00000497815 MS4A5Q9H3V2 200 aa10.14□□□□□ -0.79
CUX1-210ENST00000497815 PPP1R3EQ9H7J1 279 aa10.14□□□□□ -0.79
CUX1-210ENST00000497815 PLEKHA1Q9HB21 404 aa10.14□□□□□ -0.79
CUX1-210ENST00000497815 ACOT13Q9NPJ3 140 aa10.14□□□□□ -0.79
CUX1-210ENST00000497815 TMEM100Q9NV29 134 aa10.14□□□□□ -0.79
CUX1-210ENST00000497815 CGGBP1Q9UFW8 167 aaPredicted RBP10.14□□□□□ -0.79
CUX1-210ENST00000497815 RHBDD3Q9Y3P4 386 aa10.14□□□□□ -0.79
CUX1-210ENST00000497815 IGHV3-64DA0A0J9YX35 117 aa10.13□□□□□ -0.79
CUX1-210ENST00000497815 ZNF850A8MQ14 1090 aa10.13□□□□□ -0.79
CUX1-210ENST00000497815 H7C417 338 aa10.13□□□□□ -0.79
CUX1-210ENST00000497815 MRPS14O60783 128 aaKnown RBP10.13□□□□□ -0.79
CUX1-210ENST00000497815 LY6HO94772 140 aa10.13□□□□□ -0.79
CUX1-210ENST00000497815 ISG15P05161 165 aa10.13□□□□□ -0.79
CUX1-210ENST00000497815 ERCC1P07992 297 aaPredicted RBP10.13□□□□□ -0.79
CUX1-210ENST00000497815 ACHEP22303 614 aa10.13□□□□□ -0.79
CUX1-210ENST00000497815 CCL1P22362 96 aa10.13□□□□□ -0.79
CUX1-210ENST00000497815 GNALP38405 381 aa10.13□□□□□ -0.79
CUX1-210ENST00000497815 LIPAP38571 399 aa10.13□□□□□ -0.79
CUX1-210ENST00000497815 PTH2RP49190 550 aa10.13□□□□□ -0.79
CUX1-210ENST00000497815 CCL8P80075 99 aa10.13□□□□□ -0.79
CUX1-210ENST00000497815 TBCEQ15813 527 aaPredicted RBP10.13□□□□□ -0.79
CUX1-210ENST00000497815 DEFB113Q30KQ7 82 aa10.13□□□□□ -0.79
CUX1-210ENST00000497815 DMRTC1Q5HYR2 192 aa10.13□□□□□ -0.79
CUX1-210ENST00000497815 DMKNQ6E0U4 476 aaPredicted RBP10.13□□□□□ -0.79
CUX1-210ENST00000497815 FTMTQ8N4E7 242 aa10.13□□□□□ -0.79
CUX1-210ENST00000497815 PLPP7Q8NBV4 271 aa10.13□□□□□ -0.79
CUX1-210ENST00000497815 CSNK2A3Q8NEV1 391 aa10.13□□□□□ -0.79
CUX1-210ENST00000497815 OR51A4Q8NGJ6 313 aa10.13□□□□□ -0.79
CUX1-210ENST00000497815 OR13C3Q8NGS6 347 aa10.13□□□□□ -0.79
CUX1-210ENST00000497815 OR14K1Q8NGZ2 314 aa10.13□□□□□ -0.79
CUX1-210ENST00000497815 TSEN15Q8WW01 171 aaKnown RBP10.13□□□□□ -0.79
CUX1-210ENST00000497815 RGP1Q92546 391 aaPredicted RBP10.13□□□□□ -0.79
CUX1-210ENST00000497815 GHSRQ92847 366 aa10.13□□□□□ -0.79
CUX1-210ENST00000497815 ELMOD3Q96FG2 381 aa10.13□□□□□ -0.79
CUX1-210ENST00000497815 TRMT61AQ96FX7 289 aaKnown RBP10.13□□□□□ -0.79
CUX1-210ENST00000497815 SLC30A2Q9BRI3 323 aa10.13□□□□□ -0.79
CUX1-210ENST00000497815 ADAT1Q9BUB4 502 aaKnown RBP10.13□□□□□ -0.79
CUX1-210ENST00000497815 MRPL15Q9P015 296 aaKnown RBP10.13□□□□□ -0.79
CUX1-210ENST00000497815 ENPP5Q9UJA9 477 aa10.13□□□□□ -0.79
CUX1-210ENST00000497815 FBXO9Q9UK97 447 aaPredicted RBP10.13□□□□□ -0.79
CUX1-210ENST00000497815 ZDHHC8Q9ULC8 765 aa10.13□□□□□ -0.79
CUX1-210ENST00000497815 HHLA2Q9UM44 414 aa10.13□□□□□ -0.79
CUX1-210ENST00000497815 V9GYS6 101 aa10.13□□□□□ -0.79
CUX1-210ENST00000497815 LRBAP50851 2863 aa10.12□□□□□ -0.79
CUX1-210ENST00000497815 ZNF816-ZNF321PA0A0X1KG74 233 aa10.12□□□□□ -0.79
CUX1-210ENST00000497815 LOC390937A0A1W2PQ73 354 aa10.12□□□□□ -0.79
CUX1-210ENST00000497815 TRIM64A6NGJ6 449 aa10.12□□□□□ -0.79
CUX1-210ENST00000497815 F5H5P2 479 aa10.12□□□□□ -0.79
CUX1-210ENST00000497815 MLNRO43193 412 aa10.12□□□□□ -0.79
CUX1-210ENST00000497815 IGHV4-39P01824 125 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms