RNA–Protein interactions for RNA: ENST00000497318.1

SUPT20H-223, Transcript of SPT20 homolog, SAGA complex component, human

TSL 3

Gene SUPT20H, Length 734 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-223	ENST00000497318	C8orf46	Q8TAG6	207 aa		13.53	□□□□□ -0.24
SUPT20H-223	ENST00000497318	LRRC29	Q8WV35	223 aa		13.53	□□□□□ -0.24
SUPT20H-223	ENST00000497318	H1FX	Q92522	213 aa	Known RBP	13.53	□□□□□ -0.24
SUPT20H-223	ENST00000497318	ZNF799	Q96GE5	643 aa		13.53	□□□□□ -0.24
SUPT20H-223	ENST00000497318	TSSK2	Q96PF2	358 aa		13.53	□□□□□ -0.24
SUPT20H-223	ENST00000497318	OCSTAMP	Q9BR26	566 aa		13.53	□□□□□ -0.24
SUPT20H-223	ENST00000497318	SRA1	Q9HD15	236 aa	Known RBP	13.53	□□□□□ -0.24
SUPT20H-223	ENST00000497318	B9D1	Q9UPM9	204 aa		13.53	□□□□□ -0.24
SUPT20H-223	ENST00000497318	BBIP1	A8MTZ0	92 aa		13.52	□□□□□ -0.25
SUPT20H-223	ENST00000497318	IMPA2	O14732	288 aa		13.52	□□□□□ -0.25
SUPT20H-223	ENST00000497318	TXNDC12	O95881	172 aa		13.52	□□□□□ -0.25
SUPT20H-223	ENST00000497318	FAH	P16930	419 aa		13.52	□□□□□ -0.25
SUPT20H-223	ENST00000497318	GSK3B	P49841	420 aa		13.52	□□□□□ -0.25
SUPT20H-223	ENST00000497318	PCK2	Q16822	640 aa		13.52	□□□□□ -0.25
SUPT20H-223	ENST00000497318	DEFB121	Q5J5C9	76 aa		13.52	□□□□□ -0.25
SUPT20H-223	ENST00000497318	CYP4Z1	Q86W10	505 aa		13.52	□□□□□ -0.25
SUPT20H-223	ENST00000497318	SLC15A3	Q8IY34	581 aa		13.52	□□□□□ -0.25
SUPT20H-223	ENST00000497318	FGFRL1	Q8N441	504 aa		13.52	□□□□□ -0.25
SUPT20H-223	ENST00000497318	PNKD	Q8N490	385 aa		13.52	□□□□□ -0.25
SUPT20H-223	ENST00000497318	FAM216B	Q8N7L0	139 aa		13.52	□□□□□ -0.25
SUPT20H-223	ENST00000497318	SLC26A10	Q8NG04	563 aa		13.52	□□□□□ -0.25
SUPT20H-223	ENST00000497318	OR9Q1	Q8NGQ5	310 aa		13.52	□□□□□ -0.25
SUPT20H-223	ENST00000497318	TNFRSF14	Q92956	283 aa		13.52	□□□□□ -0.25
SUPT20H-223	ENST00000497318	WWC2-AS2	Q96NR7	200 aa		13.52	□□□□□ -0.25
SUPT20H-223	ENST00000497318	ANKRD19P	Q9H560	264 aa		13.52	□□□□□ -0.25
SUPT20H-223	ENST00000497318	OPA3	Q9H6K4	179 aa		13.52	□□□□□ -0.25
SUPT20H-223	ENST00000497318	ARGLU1	Q9NWB6	273 aa	Predicted RBP	13.52	□□□□□ -0.25
SUPT20H-223	ENST00000497318	SIGLEC7	Q9Y286	467 aa		13.52	□□□□□ -0.25
SUPT20H-223	ENST00000497318	COL7A1	Q02388	2944 aa		13.51	□□□□□ -0.25
SUPT20H-223	ENST00000497318	IGLV1-36	A0A0B4J1U3	117 aa		13.51	□□□□□ -0.25
SUPT20H-223	ENST00000497318	ANKRD30BL	A7E2S9	258 aa		13.51	□□□□□ -0.25
SUPT20H-223	ENST00000497318	PEX14	O75381	377 aa		13.51	□□□□□ -0.25
SUPT20H-223	ENST00000497318	REN	P00797	406 aa		13.51	□□□□□ -0.25
SUPT20H-223	ENST00000497318	HLA-DQA2	P01906	255 aa		13.51	□□□□□ -0.25
SUPT20H-223	ENST00000497318	CD33	P20138	364 aa		13.51	□□□□□ -0.25
SUPT20H-223	ENST00000497318	PAICS	P22234	425 aa	Known RBP	13.51	□□□□□ -0.25
SUPT20H-223	ENST00000497318	POU1F1	P28069	291 aa		13.51	□□□□□ -0.25
SUPT20H-223	ENST00000497318	DDOST	P39656	456 aa		13.51	□□□□□ -0.25
SUPT20H-223	ENST00000497318	RFX4	Q33E94	735 aa		13.51	□□□□□ -0.25
SUPT20H-223	ENST00000497318	ATPAF1	Q5TC12	328 aa	Predicted RBP	13.51	□□□□□ -0.25
SUPT20H-223	ENST00000497318	DPY19L4	Q7Z388	723 aa		13.51	□□□□□ -0.25
SUPT20H-223	ENST00000497318	OR5D13	Q8NGL4	314 aa		13.51	□□□□□ -0.25
SUPT20H-223	ENST00000497318	MED30	Q96HR3	178 aa		13.51	□□□□□ -0.25
SUPT20H-223	ENST00000497318	FAM46A	Q96IP4	442 aa	Known RBP	13.51	□□□□□ -0.25
SUPT20H-223	ENST00000497318	DNTTIP1	Q9H147	329 aa		13.51	□□□□□ -0.25
SUPT20H-223	ENST00000497318	MEGF9	Q9H1U4	602 aa		13.51	□□□□□ -0.25
SUPT20H-223	ENST00000497318	KRCC1	Q9NPI7	259 aa	Predicted RBP	13.51	□□□□□ -0.25
SUPT20H-223	ENST00000497318	CYB5R1	Q9UHQ9	305 aa		13.51	□□□□□ -0.25
SUPT20H-223	ENST00000497318	KCNG2	Q9UJ96	466 aa		13.51	□□□□□ -0.25
SUPT20H-223	ENST00000497318	CAPN7	Q9Y6W3	813 aa		13.51	□□□□□ -0.25
SUPT20H-223	ENST00000497318		A0A1B0GW55	424 aa		13.5	□□□□□ -0.25
SUPT20H-223	ENST00000497318		A0A1W2PQ09	198 aa		13.5	□□□□□ -0.25
SUPT20H-223	ENST00000497318	NKX6-3	A6NJ46	265 aa		13.5	□□□□□ -0.25
SUPT20H-223	ENST00000497318	DCTN6	O00399	190 aa		13.5	□□□□□ -0.25
SUPT20H-223	ENST00000497318	NME4	O00746	187 aa		13.5	□□□□□ -0.25
SUPT20H-223	ENST00000497318	ACOT8	O14734	319 aa		13.5	□□□□□ -0.25
SUPT20H-223	ENST00000497318	TIPRL	O75663	272 aa		13.5	□□□□□ -0.25
SUPT20H-223	ENST00000497318	ZNF682	O95780	498 aa		13.5	□□□□□ -0.25
SUPT20H-223	ENST00000497318	DUX4L2	P0CJ85	424 aa		13.5	□□□□□ -0.25
SUPT20H-223	ENST00000497318	DUX4L3	P0CJ86	424 aa		13.5	□□□□□ -0.25
SUPT20H-223	ENST00000497318	DUX4L4	P0CJ87	422 aa		13.5	□□□□□ -0.25
SUPT20H-223	ENST00000497318	DUX4L5	P0CJ88	424 aa		13.5	□□□□□ -0.25
SUPT20H-223	ENST00000497318	DUX4L6	P0CJ89	424 aa		13.5	□□□□□ -0.25
SUPT20H-223	ENST00000497318	DUX4L7	P0CJ90	424 aa		13.5	□□□□□ -0.25
SUPT20H-223	ENST00000497318	CD28	P10747	220 aa		13.5	□□□□□ -0.25
SUPT20H-223	ENST00000497318	NCK1	P16333	377 aa		13.5	□□□□□ -0.25
SUPT20H-223	ENST00000497318	TGM4	P49221	684 aa		13.5	□□□□□ -0.25
SUPT20H-223	ENST00000497318	LIPE	Q05469	1076 aa		13.5	□□□□□ -0.25
SUPT20H-223	ENST00000497318	C11orf87	Q6NUJ2	197 aa		13.5	□□□□□ -0.25
SUPT20H-223	ENST00000497318	DUX4L9	Q6RFH8	374 aa	Predicted RBP	13.5	□□□□□ -0.25
SUPT20H-223	ENST00000497318	DRAM2	Q6UX65	266 aa		13.5	□□□□□ -0.25
SUPT20H-223	ENST00000497318	OR6V1	Q8N148	313 aa		13.5	□□□□□ -0.25
SUPT20H-223	ENST00000497318	LNX2	Q8N448	690 aa		13.5	□□□□□ -0.25
SUPT20H-223	ENST00000497318	WFDC9	Q8NEX5	89 aa		13.5	□□□□□ -0.25
SUPT20H-223	ENST00000497318	OR4C15	Q8NGM1	316 aa		13.5	□□□□□ -0.25
SUPT20H-223	ENST00000497318	OR2AE1	Q8NHA4	323 aa		13.5	□□□□□ -0.25
SUPT20H-223	ENST00000497318	RSRC1	Q96IZ7	334 aa	Known RBP	13.5	□□□□□ -0.25
SUPT20H-223	ENST00000497318	NKX3-1	Q99801	234 aa	Predicted RBP	13.5	□□□□□ -0.25
SUPT20H-223	ENST00000497318	NSRP1	Q9H0G5	558 aa	Known RBP	13.5	□□□□□ -0.25
SUPT20H-223	ENST00000497318	GID8	Q9NWU2	228 aa		13.5	□□□□□ -0.25
SUPT20H-223	ENST00000497318	DUX4	Q9UBX2	424 aa		13.5	□□□□□ -0.25
SUPT20H-223	ENST00000497318		H0YAE9	185 aa		13.49	□□□□□ -0.25
SUPT20H-223	ENST00000497318	GLCE	O94923	617 aa		13.49	□□□□□ -0.25
SUPT20H-223	ENST00000497318	COX4I1	P13073	169 aa		13.49	□□□□□ -0.25
SUPT20H-223	ENST00000497318	ZNF823	P16415	610 aa		13.49	□□□□□ -0.25
SUPT20H-223	ENST00000497318	DLX1	P56177	255 aa		13.49	□□□□□ -0.25
SUPT20H-223	ENST00000497318	MAPRE2	Q15555	327 aa		13.49	□□□□□ -0.25
SUPT20H-223	ENST00000497318	SNAI3	Q3KNW1	292 aa		13.49	□□□□□ -0.25
SUPT20H-223	ENST00000497318	IFI44L	Q53G44	452 aa		13.49	□□□□□ -0.25
SUPT20H-223	ENST00000497318	ZBTB37	Q5TC79	503 aa		13.49	□□□□□ -0.25
SUPT20H-223	ENST00000497318	FKBP9P1	Q75LS8	142 aa		13.49	□□□□□ -0.25
SUPT20H-223	ENST00000497318	OR56B2P	Q8NGI1	322 aa		13.49	□□□□□ -0.25
SUPT20H-223	ENST00000497318	RORB	Q92753	470 aa		13.49	□□□□□ -0.25
SUPT20H-223	ENST00000497318	ERMAP	Q96PL5	475 aa	Predicted RBP	13.49	□□□□□ -0.25
SUPT20H-223	ENST00000497318	PNRC2	Q9NPJ4	139 aa	Known RBP	13.49	□□□□□ -0.25
SUPT20H-223	ENST00000497318	MRGBP	Q9NV56	204 aa		13.49	□□□□□ -0.25
SUPT20H-223	ENST00000497318	DNAH3	Q8TD57	4116 aa		13.48	□□□□□ -0.25
SUPT20H-223	ENST00000497318	UNC119B	A6NIH7	251 aa		13.48	□□□□□ -0.25
SUPT20H-223	ENST00000497318		K7EIL1	84 aa		13.48	□□□□□ -0.25
SUPT20H-223	ENST00000497318	CXCR6	O00574	342 aa		13.48	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 57 ms