RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 NME2P1O60361 137 aa5.48□□□□□ -1.53
SSBP1-213ENST00000496622 MPZL2O60487 215 aa5.48□□□□□ -1.53
SSBP1-213ENST00000496622 ARSBP15848 533 aa5.48□□□□□ -1.53
SSBP1-213ENST00000496622 HIST1H1BP16401 226 aaKnown RBP5.48□□□□□ -1.53
SSBP1-213ENST00000496622 CELP19835 753 aa5.48□□□□□ -1.53
SSBP1-213ENST00000496622 RBM34P42696 430 aaKnown RBP5.48□□□□□ -1.53
SSBP1-213ENST00000496622 ZNF41P51814 821 aaPredicted RBP5.48□□□□□ -1.53
SSBP1-213ENST00000496622 RAP1AP62834 184 aa5.48□□□□□ -1.53
SSBP1-213ENST00000496622 ARF1P84077 181 aaKnown RBP5.48□□□□□ -1.53
SSBP1-213ENST00000496622 COL28A1Q2UY09 1125 aa5.48□□□□□ -1.53
SSBP1-213ENST00000496622 TMEM201Q5SNT2 666 aa5.48□□□□□ -1.53
SSBP1-213ENST00000496622 ZNF550Q7Z398 422 aa5.48□□□□□ -1.53
SSBP1-213ENST00000496622 CPEB2Q7Z5Q1 589 aaKnown RBP5.48□□□□□ -1.53
SSBP1-213ENST00000496622 MYPOPQ86VE0 399 aaPredicted RBP5.48□□□□□ -1.53
SSBP1-213ENST00000496622 TMEM99Q8N816 258 aa5.48□□□□□ -1.53
SSBP1-213ENST00000496622 GDPD1Q8N9F7 314 aa5.48□□□□□ -1.53
SSBP1-213ENST00000496622 TMEM104Q8NE00 496 aa5.48□□□□□ -1.53
SSBP1-213ENST00000496622 OR52L1Q8NGH7 329 aa5.48□□□□□ -1.53
SSBP1-213ENST00000496622 OR6K3Q8NGY3 331 aa5.48□□□□□ -1.53
SSBP1-213ENST00000496622 OR5J2Q8NH18 312 aa5.48□□□□□ -1.53
SSBP1-213ENST00000496622 KCNE4Q8WWG9 221 aa5.48□□□□□ -1.53
SSBP1-213ENST00000496622 TAAR8Q969N4 342 aa5.48□□□□□ -1.53
SSBP1-213ENST00000496622 DCSTAMPQ9H295 470 aa5.48□□□□□ -1.53
SSBP1-213ENST00000496622 ASB6Q9NWX5 421 aa5.48□□□□□ -1.53
SSBP1-213ENST00000496622 ING1Q9UK53 422 aaPredicted RBP5.48□□□□□ -1.53
SSBP1-213ENST00000496622 EXOGQ9Y2C4 368 aaKnown RBP5.48□□□□□ -1.53
SSBP1-213ENST00000496622 LSM2Q9Y333 95 aaKnown RBP5.48□□□□□ -1.53
SSBP1-213ENST00000496622 TBL2Q9Y4P3 447 aaKnown RBP5.48□□□□□ -1.53
SSBP1-213ENST00000496622 SIRT4Q9Y6E7 314 aaPredicted RBP5.48□□□□□ -1.53
SSBP1-213ENST00000496622 SMG1Q96Q15 3661 aaKnown RBP5.48□□□□□ -1.53
SSBP1-213ENST00000496622 A0A1W2PPK0 400 aa5.48□□□□□ -1.53
SSBP1-213ENST00000496622 OR6C68A6NDL8 312 aa5.48□□□□□ -1.53
SSBP1-213ENST00000496622 PDCD5O14737 125 aa5.48□□□□□ -1.53
SSBP1-213ENST00000496622 MYL12BO14950 172 aa5.48□□□□□ -1.53
SSBP1-213ENST00000496622 KRT33AO76009 404 aa5.48□□□□□ -1.53
SSBP1-213ENST00000496622 STK17BO94768 372 aa5.48□□□□□ -1.53
SSBP1-213ENST00000496622 GP1BBP13224 206 aa5.48□□□□□ -1.53
SSBP1-213ENST00000496622 CD59P13987 128 aa5.48□□□□□ -1.53
SSBP1-213ENST00000496622 TCN2P20062 427 aa5.48□□□□□ -1.53
SSBP1-213ENST00000496622 ID1P41134 155 aa5.48□□□□□ -1.53
SSBP1-213ENST00000496622 ATP5J2P56134 94 aa5.48□□□□□ -1.53
SSBP1-213ENST00000496622 ERVS71-1P61550 626 aa5.48□□□□□ -1.53
SSBP1-213ENST00000496622 ALKBH6Q3KRA9 238 aa5.48□□□□□ -1.53
SSBP1-213ENST00000496622 B3GNTL1Q67FW5 361 aaPredicted RBP5.48□□□□□ -1.53
SSBP1-213ENST00000496622 LEMD1Q68G75 181 aa5.48□□□□□ -1.53
SSBP1-213ENST00000496622 LRRN1Q6UXK5 716 aa5.48□□□□□ -1.53
SSBP1-213ENST00000496622 TMPRSS7Q7RTY8 843 aa5.48□□□□□ -1.53
SSBP1-213ENST00000496622 FGD2Q7Z6J4 655 aa5.48□□□□□ -1.53
SSBP1-213ENST00000496622 ATG4DQ86TL0 474 aaPredicted RBP5.48□□□□□ -1.53
SSBP1-213ENST00000496622 BOD1L2Q8IYS8 172 aa5.48□□□□□ -1.53
SSBP1-213ENST00000496622 LINC00471Q8N535 108 aa5.48□□□□□ -1.53
SSBP1-213ENST00000496622 ZNF441Q8N8Z8 693 aa5.48□□□□□ -1.53
SSBP1-213ENST00000496622 KISS1RQ969F8 398 aaPredicted RBP5.48□□□□□ -1.53
SSBP1-213ENST00000496622 TIMP4Q99727 224 aa5.48□□□□□ -1.53
SSBP1-213ENST00000496622 CMKLR1Q99788 373 aa5.48□□□□□ -1.53
SSBP1-213ENST00000496622 ZNF649Q9BS31 505 aa5.48□□□□□ -1.53
SSBP1-213ENST00000496622 TMED9Q9BVK6 235 aa5.48□□□□□ -1.53
SSBP1-213ENST00000496622 NANSQ9NR45 359 aa5.48□□□□□ -1.53
SSBP1-213ENST00000496622 LRFN1Q9P244 771 aa5.48□□□□□ -1.53
SSBP1-213ENST00000496622 MYOTQ9UBF9 498 aa5.48□□□□□ -1.53
SSBP1-213ENST00000496622 KIF25Q9UIL4 384 aa5.48□□□□□ -1.53
SSBP1-213ENST00000496622 SCP2D1Q9UJQ7 156 aa5.48□□□□□ -1.53
SSBP1-213ENST00000496622 ZDHHC8Q9ULC8 765 aa5.48□□□□□ -1.53
SSBP1-213ENST00000496622 ADGRG4Q8IZF6 3080 aa5.48□□□□□ -1.53
SSBP1-213ENST00000496622 NBEAQ8NFP9 2946 aa5.48□□□□□ -1.53
SSBP1-213ENST00000496622 A6NNC1 897 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 CSTBP04080 98 aaKnown RBP5.47□□□□□ -1.53
SSBP1-213ENST00000496622 HLA-DOBP13765 273 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 KLK2P20151 261 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 PYCR1P32322 319 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 GDNFP39905 211 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 CDKN2AP42771 156 aaKnown RBP5.47□□□□□ -1.53
SSBP1-213ENST00000496622 EVX1P49640 407 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 IDH3GP51553 393 aaPredicted RBP5.47□□□□□ -1.53
SSBP1-213ENST00000496622 LSM6P62312 80 aaKnown RBP5.47□□□□□ -1.53
SSBP1-213ENST00000496622 HERV-K104P63124 156 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 BDH1Q02338 343 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 QPRTQ15274 297 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 SURF2Q15527 256 aaPredicted RBP5.47□□□□□ -1.53
SSBP1-213ENST00000496622 ZNF239Q16600 458 aaKnown RBP5.47□□□□□ -1.53
SSBP1-213ENST00000496622 GLYR1Q49A26 553 aaPredicted RBP5.47□□□□□ -1.53
SSBP1-213ENST00000496622 SCGB2B2Q4G0G5 96 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 C3orf38Q5JPI3 329 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 DCAF10Q5QP82 559 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 FAM27D1Q5T7N8 215 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 ABLIM2Q6H8Q1 611 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 C22orf42Q6IC83 251 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 OR8G2PQ6IF36 304 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 FAM198BQ6UWH4 519 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 MDGA2Q7Z553 956 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 MRGPREQ86SM8 312 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 WDFY1Q8IWB7 410 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 EIF4E3Q8N5X7 224 aaKnown RBP5.47□□□□□ -1.53
SSBP1-213ENST00000496622 FAM71CQ8NEG0 241 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 OR6K6Q8NGW6 343 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 OR11L1Q8NGX0 322 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 BRIX1Q8TDN6 353 aaKnown RBP5.47□□□□□ -1.53
SSBP1-213ENST00000496622 FAM222BQ8WU58 562 aa5.47□□□□□ -1.53
SSBP1-213ENST00000496622 TSEN15Q8WW01 171 aaKnown RBP5.47□□□□□ -1.53
SSBP1-213ENST00000496622 SPRYD4Q8WW59 207 aaPredicted RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms