RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 SWI5Q1ZZU3 235 aa18.62■□□□□ 0.57
C9orf3-222ENST00000496567 FTMTQ8N4E7 242 aa18.62■□□□□ 0.57
C9orf3-222ENST00000496567 CSNK2A3Q8NEV1 391 aa18.62■□□□□ 0.57
C9orf3-222ENST00000496567 GHSRQ92847 366 aa18.62■□□□□ 0.57
C9orf3-222ENST00000496567 CYSLTR2Q9NS75 346 aa18.62■□□□□ 0.57
C9orf3-222ENST00000496567 MYEF2Q9P2K5 600 aaKnown RBP18.62■□□□□ 0.57
C9orf3-222ENST00000496567 ZNF281Q9Y2X9 895 aa18.62■□□□□ 0.57
C9orf3-222ENST00000496567 RAI1Q7Z5J4 1906 aaPredicted RBP18.62■□□□□ 0.57
C9orf3-222ENST00000496567 PLSCR5A0PG75 271 aa18.61■□□□□ 0.57
C9orf3-222ENST00000496567 TRIM64CA6NLI5 447 aa18.61■□□□□ 0.57
C9orf3-222ENST00000496567 DHRS7CA6NNS2 312 aa18.61■□□□□ 0.57
C9orf3-222ENST00000496567 PRSS12P56730 875 aa18.61■□□□□ 0.57
C9orf3-222ENST00000496567 TPBGQ13641 420 aa18.61■□□□□ 0.57
C9orf3-222ENST00000496567 MST1LQ2TV78 715 aa18.61■□□□□ 0.57
C9orf3-222ENST00000496567 ARMCX4Q5H9R4 360 aa18.61■□□□□ 0.57
C9orf3-222ENST00000496567 Q6ZSR3 168 aa18.61■□□□□ 0.57
C9orf3-222ENST00000496567 SEMA6DQ8NFY4 1073 aa18.61■□□□□ 0.57
C9orf3-222ENST00000496567 OR56B2PQ8NGI1 322 aa18.61■□□□□ 0.57
C9orf3-222ENST00000496567 OPALINQ96PE5 141 aa18.61■□□□□ 0.57
C9orf3-222ENST00000496567 SOX7Q9BT81 388 aa18.61■□□□□ 0.57
C9orf3-222ENST00000496567 LAMP3Q9UQV4 416 aa18.61■□□□□ 0.57
C9orf3-222ENST00000496567 SOD3P08294 240 aa18.6■□□□□ 0.57
C9orf3-222ENST00000496567 PSMB9P28065 219 aa18.6■□□□□ 0.57
C9orf3-222ENST00000496567 RIPPLY1Q0D2K3 151 aa18.6■□□□□ 0.57
C9orf3-222ENST00000496567 NEDD8Q15843 81 aa18.6■□□□□ 0.57
C9orf3-222ENST00000496567 ALKBH6Q3KRA9 238 aa18.6■□□□□ 0.57
C9orf3-222ENST00000496567 ZMAT1Q5H9K5 638 aa18.6■□□□□ 0.57
C9orf3-222ENST00000496567 TMEM255AQ5JRV8 349 aa18.6■□□□□ 0.57
C9orf3-222ENST00000496567 OR5AS1Q8N127 324 aa18.6■□□□□ 0.57
C9orf3-222ENST00000496567 BHLHE23Q8NDY6 225 aa18.6■□□□□ 0.57
C9orf3-222ENST00000496567 OR8G5Q8NG78 346 aa18.6■□□□□ 0.57
C9orf3-222ENST00000496567 PGLYRP3Q96LB9 341 aa18.6■□□□□ 0.57
C9orf3-222ENST00000496567 TRAF4Q9BUZ4 470 aaPredicted RBP18.6■□□□□ 0.57
C9orf3-222ENST00000496567 EDARQ9UNE0 448 aa18.6■□□□□ 0.57
C9orf3-222ENST00000496567 V9GYS6 101 aa18.6■□□□□ 0.57
C9orf3-222ENST00000496567 M0R233 179 aa18.59■□□□□ 0.57
C9orf3-222ENST00000496567 CD8AP01732 235 aa18.59■□□□□ 0.57
C9orf3-222ENST00000496567 PRF1P14222 555 aa18.59■□□□□ 0.57
C9orf3-222ENST00000496567 CPEP16870 476 aa18.59■□□□□ 0.57
C9orf3-222ENST00000496567 CD53P19397 219 aa18.59■□□□□ 0.57
C9orf3-222ENST00000496567 TNK1Q13470 666 aa18.59■□□□□ 0.57
C9orf3-222ENST00000496567 YIF1BQ5BJH7 314 aa18.59■□□□□ 0.57
C9orf3-222ENST00000496567 ZBTB37Q5TC79 503 aa18.59■□□□□ 0.57
C9orf3-222ENST00000496567 LIPKQ5VXJ0 399 aa18.59■□□□□ 0.57
C9orf3-222ENST00000496567 OR14K1Q8NGZ2 314 aa18.59■□□□□ 0.57
C9orf3-222ENST00000496567 GPR148Q8TDV2 347 aa18.59■□□□□ 0.57
C9orf3-222ENST00000496567 PLEKHA1Q9HB21 404 aa18.59■□□□□ 0.57
C9orf3-222ENST00000496567 DYNLRB1Q9NP97 96 aa18.59■□□□□ 0.57
C9orf3-222ENST00000496567 MRPL15Q9P015 296 aaKnown RBP18.59■□□□□ 0.57
C9orf3-222ENST00000496567 PMF1-BGLAPU3KQ54 211 aa18.59■□□□□ 0.57
C9orf3-222ENST00000496567 ANKRD30BLA7E2S9 258 aa18.59■□□□□ 0.57
C9orf3-222ENST00000496567 INMTO95050 263 aa18.59■□□□□ 0.57
C9orf3-222ENST00000496567 ACKR3P25106 362 aa18.59■□□□□ 0.57
C9orf3-222ENST00000496567 MMP15P51511 669 aa18.59■□□□□ 0.57
C9orf3-222ENST00000496567 SYT6Q5T7P8 510 aaPredicted RBP18.59■□□□□ 0.57
C9orf3-222ENST00000496567 C11orf71Q6IPW1 123 aa18.59■□□□□ 0.57
C9orf3-222ENST00000496567 MS4A15Q8N5U1 240 aa18.59■□□□□ 0.57
C9orf3-222ENST00000496567 C10orf35Q96D05 121 aa18.59■□□□□ 0.57
C9orf3-222ENST00000496567 SLC22A4Q9H015 551 aa18.59■□□□□ 0.57
C9orf3-222ENST00000496567 MS4A5Q9H3V2 200 aa18.59■□□□□ 0.57
C9orf3-222ENST00000496567 PIGLQ9Y2B2 252 aa18.59■□□□□ 0.57
C9orf3-222ENST00000496567 CELSR2Q9HCU4 2923 aa18.59■□□□□ 0.57
C9orf3-222ENST00000496567 H3BSH0 61 aa18.58■□□□□ 0.56
C9orf3-222ENST00000496567 ALDH3B1P43353 468 aa18.58■□□□□ 0.56
C9orf3-222ENST00000496567 TSTQ16762 297 aaKnown RBP18.58■□□□□ 0.56
C9orf3-222ENST00000496567 OR13C3Q8NGS6 347 aa18.58■□□□□ 0.56
C9orf3-222ENST00000496567 OR13G1Q8NGZ3 307 aa18.58■□□□□ 0.56
C9orf3-222ENST00000496567 OR10AC1Q8NH08 325 aa18.58■□□□□ 0.56
C9orf3-222ENST00000496567 TSEN15Q8WW01 171 aaKnown RBP18.58■□□□□ 0.56
C9orf3-222ENST00000496567 TMEM100Q9NV29 134 aa18.58■□□□□ 0.56
C9orf3-222ENST00000496567 ENPP5Q9UJA9 477 aa18.58■□□□□ 0.56
C9orf3-222ENST00000496567 DHDHQ9UQ10 334 aa18.58■□□□□ 0.56
C9orf3-222ENST00000496567 NOP16Q9Y3C1 178 aaKnown RBP18.58■□□□□ 0.56
C9orf3-222ENST00000496567 HECTD1Q9ULT8 2610 aa18.57■□□□□ 0.56
C9orf3-222ENST00000496567 ZNF816-ZNF321PA0A0X1KG74 233 aa18.57■□□□□ 0.56
C9orf3-222ENST00000496567 TFAP2AP05549 437 aa18.57■□□□□ 0.56
C9orf3-222ENST00000496567 PPOXP50336 477 aa18.57■□□□□ 0.56
C9orf3-222ENST00000496567 ZNF81P51508 661 aa18.57■□□□□ 0.56
C9orf3-222ENST00000496567 TRAM1Q15629 374 aa18.57■□□□□ 0.56
C9orf3-222ENST00000496567 PHC2Q8IXK0 858 aa18.57■□□□□ 0.56
C9orf3-222ENST00000496567 OR51A4Q8NGJ6 313 aa18.57■□□□□ 0.56
C9orf3-222ENST00000496567 RGP1Q92546 391 aaPredicted RBP18.57■□□□□ 0.56
C9orf3-222ENST00000496567 MUL1Q969V5 352 aa18.57■□□□□ 0.56
C9orf3-222ENST00000496567 CCL19Q99731 98 aa18.57■□□□□ 0.56
C9orf3-222ENST00000496567 SLC30A2Q9BRI3 323 aa18.57■□□□□ 0.56
C9orf3-222ENST00000496567 ZNF275Q9NSD4 429 aaPredicted RBP18.57■□□□□ 0.56
C9orf3-222ENST00000496567 CENPEQ02224 2701 aa18.57■□□□□ 0.56
C9orf3-222ENST00000496567 FAHP16930 419 aa18.56■□□□□ 0.56
C9orf3-222ENST00000496567 JUNBP17275 347 aaPredicted RBP18.56■□□□□ 0.56
C9orf3-222ENST00000496567 GNALP38405 381 aa18.56■□□□□ 0.56
C9orf3-222ENST00000496567 KRTAP10-9P60411 292 aa18.56■□□□□ 0.56
C9orf3-222ENST00000496567 KRT74Q7RTS7 529 aa18.56■□□□□ 0.56
C9orf3-222ENST00000496567 THRSPQ92748 146 aa18.56■□□□□ 0.56
C9orf3-222ENST00000496567 DIRC2Q96SL1 478 aa18.56■□□□□ 0.56
C9orf3-222ENST00000496567 MSL2Q9HCI7 577 aa18.56■□□□□ 0.56
C9orf3-222ENST00000496567 ZDHHC8Q9ULC8 765 aa18.56■□□□□ 0.56
C9orf3-222ENST00000496567 LRBAP50851 2863 aa18.56■□□□□ 0.56
C9orf3-222ENST00000496567 CCRL2O00421 344 aa18.55■□□□□ 0.56
C9orf3-222ENST00000496567 LILRA1O75019 489 aa18.55■□□□□ 0.56
C9orf3-222ENST00000496567 CST4P01036 141 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms