RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 GADD45AP24522 165 aa7.46□□□□□ -1.21
U2AF1-212ENST00000496462 OPRL1P41146 370 aa7.46□□□□□ -1.21
U2AF1-212ENST00000496462 RBP2P50120 134 aa7.46□□□□□ -1.21
U2AF1-212ENST00000496462 FUT6P51993 359 aa7.46□□□□□ -1.21
U2AF1-212ENST00000496462 FXYD6P3P58550 94 aa7.46□□□□□ -1.21
U2AF1-212ENST00000496462 GDPGP1Q6ZNW5 385 aa7.46□□□□□ -1.21
U2AF1-212ENST00000496462 CEACAM19Q7Z692 300 aa7.46□□□□□ -1.21
U2AF1-212ENST00000496462 CDH24Q86UP0 819 aa7.46□□□□□ -1.21
U2AF1-212ENST00000496462 NKAIN3Q8N8D7 197 aa7.46□□□□□ -1.21
U2AF1-212ENST00000496462 RDH5Q92781 318 aa7.46□□□□□ -1.21
U2AF1-212ENST00000496462 JAM3Q9BX67 310 aa7.46□□□□□ -1.21
U2AF1-212ENST00000496462 CDCA4Q9BXL8 241 aa7.46□□□□□ -1.21
U2AF1-212ENST00000496462 MRPL22Q9NWU5 206 aaKnown RBP7.46□□□□□ -1.21
U2AF1-212ENST00000496462 MRPL15Q9P015 296 aaKnown RBP7.46□□□□□ -1.21
U2AF1-212ENST00000496462 STARD10Q9Y365 291 aa7.46□□□□□ -1.21
U2AF1-212ENST00000496462 POLQO75417 2590 aa7.46□□□□□ -1.21
U2AF1-212ENST00000496462 DPRXA6NFQ7 191 aa7.46□□□□□ -1.22
U2AF1-212ENST00000496462 DHRS7CA6NNS2 312 aa7.46□□□□□ -1.22
U2AF1-212ENST00000496462 B4DXG7 233 aa7.46□□□□□ -1.22
U2AF1-212ENST00000496462 DCTN6O00399 190 aa7.46□□□□□ -1.22
U2AF1-212ENST00000496462 GPANK1O95872 356 aa7.46□□□□□ -1.22
U2AF1-212ENST00000496462 GRPP07492 148 aa7.46□□□□□ -1.22
U2AF1-212ENST00000496462 ADRA2AP08913 450 aa7.46□□□□□ -1.22
U2AF1-212ENST00000496462 CRHBPP24387 322 aa7.46□□□□□ -1.22
U2AF1-212ENST00000496462 S100A5P33763 92 aa7.46□□□□□ -1.22
U2AF1-212ENST00000496462 MTCP1P56278 107 aa7.46□□□□□ -1.22
U2AF1-212ENST00000496462 CCDC92Q53HC0 331 aaPredicted RBP7.46□□□□□ -1.22
U2AF1-212ENST00000496462 OR8G5Q8NG78 346 aa7.46□□□□□ -1.22
U2AF1-212ENST00000496462 UBASH3BQ8TF42 649 aa7.46□□□□□ -1.22
U2AF1-212ENST00000496462 NRG4Q8WWG1 115 aa7.46□□□□□ -1.22
U2AF1-212ENST00000496462 HAVCR1Q96D42 359 aa7.46□□□□□ -1.22
U2AF1-212ENST00000496462 ZNF837Q96EG3 531 aaPredicted RBP7.46□□□□□ -1.22
U2AF1-212ENST00000496462 MRI1Q9BV20 369 aa7.46□□□□□ -1.22
U2AF1-212ENST00000496462 CPAMD8Q8IZJ3 1885 aa7.46□□□□□ -1.22
U2AF1-212ENST00000496462 SCGNO76038 276 aa7.46□□□□□ -1.22
U2AF1-212ENST00000496462 RPL5P46777 297 aaKnown RBP7.46□□□□□ -1.22
U2AF1-212ENST00000496462 LINC01590Q5TEZ4 76 aa7.46□□□□□ -1.22
U2AF1-212ENST00000496462 SLC36A1Q7Z2H8 476 aa7.46□□□□□ -1.22
U2AF1-212ENST00000496462 KLF14Q8TD94 323 aaPredicted RBP7.46□□□□□ -1.22
U2AF1-212ENST00000496462 ACOXLQ9NUZ1 547 aa7.46□□□□□ -1.22
U2AF1-212ENST00000496462 ING4Q9UNL4 249 aa7.46□□□□□ -1.22
U2AF1-212ENST00000496462 PPP1R3CQ9UQK1 317 aa7.46□□□□□ -1.22
U2AF1-212ENST00000496462 MYO9AB2RTY4 2548 aa7.46□□□□□ -1.22
U2AF1-212ENST00000496462 UBBP0CG47 229 aa7.45□□□□□ -1.22
U2AF1-212ENST00000496462 BDKRB2P30411 391 aa7.45□□□□□ -1.22
U2AF1-212ENST00000496462 TGFBR2P37173 567 aa7.45□□□□□ -1.22
U2AF1-212ENST00000496462 CFAP77Q6ZQR2 320 aa7.45□□□□□ -1.22
U2AF1-212ENST00000496462 NABP1Q96AH0 204 aa7.45□□□□□ -1.22
U2AF1-212ENST00000496462 NMD3Q96D46 503 aaKnown RBP7.45□□□□□ -1.22
U2AF1-212ENST00000496462 METTL9Q9H1A3 318 aa7.45□□□□□ -1.22
U2AF1-212ENST00000496462 ZCCHC4Q9H5U6 513 aa7.45□□□□□ -1.22
U2AF1-212ENST00000496462 B3GNT2Q9NY97 397 aa7.45□□□□□ -1.22
U2AF1-212ENST00000496462 HEATR5AQ86XA9 2040 aa7.45□□□□□ -1.22
U2AF1-212ENST00000496462 TRAV38-1A0A0B4J264 116 aa7.45□□□□□ -1.22
U2AF1-212ENST00000496462 CCDC182A6NF36 153 aa7.45□□□□□ -1.22
U2AF1-212ENST00000496462 NXPH2O95156 264 aa7.45□□□□□ -1.22
U2AF1-212ENST00000496462 MMP7P09237 267 aaPredicted RBP7.45□□□□□ -1.22
U2AF1-212ENST00000496462 GSK3AP49840 483 aa7.45□□□□□ -1.22
U2AF1-212ENST00000496462 FOXG1P55316 489 aaPredicted RBP7.45□□□□□ -1.22
U2AF1-212ENST00000496462 SMN1Q16637 294 aaKnown RBP7.45□□□□□ -1.22
U2AF1-212ENST00000496462 SHEQ5VZ18 495 aa7.45□□□□□ -1.22
U2AF1-212ENST00000496462 NANOGP1Q8N7R0 232 aa7.45□□□□□ -1.22
U2AF1-212ENST00000496462 TMIGD2Q96BF3 282 aa7.45□□□□□ -1.22
U2AF1-212ENST00000496462 GAL3ST1Q99999 423 aa7.45□□□□□ -1.22
U2AF1-212ENST00000496462 UBAP1Q9NZ09 502 aa7.45□□□□□ -1.22
U2AF1-212ENST00000496462 CRNNQ9UBG3 495 aaPredicted RBP7.45□□□□□ -1.22
U2AF1-212ENST00000496462 AIREO43918 545 aa7.45□□□□□ -1.22
U2AF1-212ENST00000496462 GNAO1P09471 354 aa7.45□□□□□ -1.22
U2AF1-212ENST00000496462 SMIM21Q3B7S5 101 aa7.45□□□□□ -1.22
U2AF1-212ENST00000496462 FBXW12Q6X9E4 464 aa7.45□□□□□ -1.22
U2AF1-212ENST00000496462 SLC7A6Q92536 515 aa7.45□□□□□ -1.22
U2AF1-212ENST00000496462 UBE2FQ969M7 185 aa7.45□□□□□ -1.22
U2AF1-212ENST00000496462 OPALINQ96PE5 141 aa7.45□□□□□ -1.22
U2AF1-212ENST00000496462 PSMG3-AS1Q96PY0 264 aa7.45□□□□□ -1.22
U2AF1-212ENST00000496462 C1QTNF5Q9BXJ0 243 aa7.45□□□□□ -1.22
U2AF1-212ENST00000496462 RSPO3Q9BXY4 272 aaPredicted RBP7.45□□□□□ -1.22
U2AF1-212ENST00000496462 TMEM138Q9NPI0 162 aa7.45□□□□□ -1.22
U2AF1-212ENST00000496462 FZR1Q9UM11 496 aa7.45□□□□□ -1.22
U2AF1-212ENST00000496462 BSNQ9UPA5 3926 aa7.45□□□□□ -1.22
U2AF1-212ENST00000496462 NDUFA2O43678 99 aa7.44□□□□□ -1.22
U2AF1-212ENST00000496462 INMTO95050 263 aa7.44□□□□□ -1.22
U2AF1-212ENST00000496462 IGLV1-44P01699 117 aa7.44□□□□□ -1.22
U2AF1-212ENST00000496462 IGHA1P01876 353 aa7.44□□□□□ -1.22
U2AF1-212ENST00000496462 CD36P16671 472 aa7.44□□□□□ -1.22
U2AF1-212ENST00000496462 ZNF14P17017 642 aaPredicted RBP7.44□□□□□ -1.22
U2AF1-212ENST00000496462 HNF1AP20823 631 aa7.44□□□□□ -1.22
U2AF1-212ENST00000496462 PPOXP50336 477 aa7.44□□□□□ -1.22
U2AF1-212ENST00000496462 EFNA4P52798 201 aa7.44□□□□□ -1.22
U2AF1-212ENST00000496462 HCCSP53701 268 aa7.44□□□□□ -1.22
U2AF1-212ENST00000496462 PRDX4Q13162 271 aa7.44□□□□□ -1.22
U2AF1-212ENST00000496462 CDK5R1Q15078 307 aa7.44□□□□□ -1.22
U2AF1-212ENST00000496462 LIPKQ5VXJ0 399 aa7.44□□□□□ -1.22
U2AF1-212ENST00000496462 RNLSQ5VYX0 342 aa7.44□□□□□ -1.22
U2AF1-212ENST00000496462 OR5A2Q8NGI9 324 aa7.44□□□□□ -1.22
U2AF1-212ENST00000496462 FGGYQ96C11 551 aa7.44□□□□□ -1.22
U2AF1-212ENST00000496462 SMIM19Q96E16 107 aa7.44□□□□□ -1.22
U2AF1-212ENST00000496462 NEDD4LQ96PU5 975 aa7.44□□□□□ -1.22
U2AF1-212ENST00000496462 RNF7Q9UBF6 113 aa7.44□□□□□ -1.22
U2AF1-212ENST00000496462 ABCA4P78363 2273 aa7.44□□□□□ -1.22
U2AF1-212ENST00000496462 IGKV1D-43A0A0B4J1Z2 117 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms