RNA–Protein interactions for RNA: ENST00000496335.1

PDAP1-204, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-204ENST00000496335 YIPF3Q9GZM5 350 aa12.13□□□□□ -0.47
PDAP1-204ENST00000496335 C7orf69Q9H7B7 122 aa12.13□□□□□ -0.47
PDAP1-204ENST00000496335 METRNQ9UJH8 293 aa12.13□□□□□ -0.47
PDAP1-204ENST00000496335 COPS3Q9UNS2 423 aa12.13□□□□□ -0.47
PDAP1-204ENST00000496335 NOP16Q9Y3C1 178 aaKnown RBP12.13□□□□□ -0.47
PDAP1-204ENST00000496335 PPIAL4AQ9Y536 164 aa12.13□□□□□ -0.47
PDAP1-204ENST00000496335 LRP12Q9Y561 859 aa12.13□□□□□ -0.47
PDAP1-204ENST00000496335 ANKRD30BLA7E2S9 258 aa12.12□□□□□ -0.47
PDAP1-204ENST00000496335 PTBP3O95758 552 aaKnown RBP12.12□□□□□ -0.47
PDAP1-204ENST00000496335 GRPP07492 148 aa12.12□□□□□ -0.47
PDAP1-204ENST00000496335 ACTR3P61158 418 aa12.12□□□□□ -0.47
PDAP1-204ENST00000496335 KRTAP24-1Q3LI83 254 aa12.12□□□□□ -0.47
PDAP1-204ENST00000496335 ZNF404Q494X3 552 aa12.12□□□□□ -0.47
PDAP1-204ENST00000496335 LCN1P1Q5VSP4 162 aa12.12□□□□□ -0.47
PDAP1-204ENST00000496335 AADACL4Q5VUY2 407 aa12.12□□□□□ -0.47
PDAP1-204ENST00000496335 LYPD2Q6UXB3 125 aa12.12□□□□□ -0.47
PDAP1-204ENST00000496335 ZNF826PQ6ZT77 177 aa12.12□□□□□ -0.47
PDAP1-204ENST00000496335 MEPCEQ7L2J0 689 aaKnown RBP12.12□□□□□ -0.47
PDAP1-204ENST00000496335 PHC2Q8IXK0 858 aa12.12□□□□□ -0.47
PDAP1-204ENST00000496335 BOLLQ8N9W6 283 aaKnown RBP12.12□□□□□ -0.47
PDAP1-204ENST00000496335 TMEM163Q8TC26 289 aa12.12□□□□□ -0.47
PDAP1-204ENST00000496335 TMEM158Q8WZ71 300 aa12.12□□□□□ -0.47
PDAP1-204ENST00000496335 LYZL4Q96KX0 146 aa12.12□□□□□ -0.47
PDAP1-204ENST00000496335 PKP2Q99959 881 aa12.12□□□□□ -0.47
PDAP1-204ENST00000496335 OCEL1Q9H607 264 aa12.12□□□□□ -0.47
PDAP1-204ENST00000496335 FN3KRPQ9HA64 309 aa12.12□□□□□ -0.47
PDAP1-204ENST00000496335 C1orf123Q9NWV4 160 aa12.12□□□□□ -0.47
PDAP1-204ENST00000496335 RNF7Q9UBF6 113 aa12.12□□□□□ -0.47
PDAP1-204ENST00000496335 OPN4Q9UHM6 478 aa12.12□□□□□ -0.47
PDAP1-204ENST00000496335 RHBDD3Q9Y3P4 386 aa12.12□□□□□ -0.47
PDAP1-204ENST00000496335 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.11□□□□□ -0.47
PDAP1-204ENST00000496335 H3BNX3 289 aa12.11□□□□□ -0.47
PDAP1-204ENST00000496335 J3QLI3 93 aa12.11□□□□□ -0.47
PDAP1-204ENST00000496335 RPS2P15880 293 aaKnown RBP12.11□□□□□ -0.47
PDAP1-204ENST00000496335 CFL1P23528 166 aaKnown RBP12.11□□□□□ -0.47
PDAP1-204ENST00000496335 GATA3P23771 443 aa12.11□□□□□ -0.47
PDAP1-204ENST00000496335 PSMA6P60900 246 aaKnown RBP12.11□□□□□ -0.47
PDAP1-204ENST00000496335 ESCO2Q56NI9 601 aa12.11□□□□□ -0.47
PDAP1-204ENST00000496335 SFRP4Q6FHJ7 346 aaPredicted RBP12.11□□□□□ -0.47
PDAP1-204ENST00000496335 KCTD18Q6PI47 426 aaPredicted RBP12.11□□□□□ -0.47
PDAP1-204ENST00000496335 KLBQ86Z14 1044 aa12.11□□□□□ -0.47
PDAP1-204ENST00000496335 RFLNBQ8N5W9 214 aa12.11□□□□□ -0.47
PDAP1-204ENST00000496335 SPERTQ8NA61 448 aa12.11□□□□□ -0.47
PDAP1-204ENST00000496335 OR8B12Q8NGG6 310 aa12.11□□□□□ -0.47
PDAP1-204ENST00000496335 OR8S1Q8NH09 359 aa12.11□□□□□ -0.47
PDAP1-204ENST00000496335 CNN2Q99439 309 aaKnown RBP12.11□□□□□ -0.47
PDAP1-204ENST00000496335 OSBPL10Q9BXB5 764 aa12.11□□□□□ -0.47
PDAP1-204ENST00000496335 RIBC2Q9H4K1 309 aa12.11□□□□□ -0.47
PDAP1-204ENST00000496335 NIPAL2Q9H841 368 aa12.11□□□□□ -0.47
PDAP1-204ENST00000496335 H2AFY2Q9P0M6 372 aaPredicted RBP12.11□□□□□ -0.47
PDAP1-204ENST00000496335 POLR3KQ9Y2Y1 108 aaPredicted RBP12.11□□□□□ -0.47
PDAP1-204ENST00000496335 PPIAL4CA0A0B4J2A2 164 aa12.1□□□□□ -0.47
PDAP1-204ENST00000496335 A6NLC8 198 aa12.1□□□□□ -0.47
PDAP1-204ENST00000496335 A8MXK9 166 aa12.1□□□□□ -0.47
PDAP1-204ENST00000496335 C3orf80F5H4A9 247 aa12.1□□□□□ -0.47
PDAP1-204ENST00000496335 MAGEB4O15481 346 aaPredicted RBP12.1□□□□□ -0.47
PDAP1-204ENST00000496335 RGS9O75916 674 aaPredicted RBP12.1□□□□□ -0.47
PDAP1-204ENST00000496335 ACKR3P25106 362 aa12.1□□□□□ -0.47
PDAP1-204ENST00000496335 CD80P33681 288 aa12.1□□□□□ -0.47
PDAP1-204ENST00000496335 NXNL2Q5VZ03 156 aa12.1□□□□□ -0.47
PDAP1-204ENST00000496335 C1QL2Q7Z5L3 287 aa12.1□□□□□ -0.47
PDAP1-204ENST00000496335 WDR86Q86TI4 376 aa12.1□□□□□ -0.47
PDAP1-204ENST00000496335 PLPP7Q8NBV4 271 aa12.1□□□□□ -0.47
PDAP1-204ENST00000496335 SPATA3Q8NHX4 192 aa12.1□□□□□ -0.47
PDAP1-204ENST00000496335 PPP1R14AQ96A00 147 aa12.1□□□□□ -0.47
PDAP1-204ENST00000496335 PAPOLGQ9BWT3 736 aaKnown RBP12.1□□□□□ -0.47
PDAP1-204ENST00000496335 SSBP3Q9BWW4 388 aaPredicted RBP12.1□□□□□ -0.47
PDAP1-204ENST00000496335 GABARAPL3Q9BY60 117 aa12.1□□□□□ -0.47
PDAP1-204ENST00000496335 RGCCQ9H4X1 137 aa12.1□□□□□ -0.47
PDAP1-204ENST00000496335 ADGRL4Q9HBW9 690 aa12.1□□□□□ -0.47
PDAP1-204ENST00000496335 C14orf119Q9NWQ9 140 aa12.1□□□□□ -0.47
PDAP1-204ENST00000496335 FAM206AQ9NX38 181 aa12.1□□□□□ -0.47
PDAP1-204ENST00000496335 MIOXQ9UGB7 285 aa12.1□□□□□ -0.47
PDAP1-204ENST00000496335 ENOPH1Q9UHY7 261 aa12.1□□□□□ -0.47
PDAP1-204ENST00000496335 LRCH1Q9Y2L9 728 aa12.1□□□□□ -0.47
PDAP1-204ENST00000496335 TMEM269A0A1B0GVZ9 245 aa12.09□□□□□ -0.47
PDAP1-204ENST00000496335 hCG_1807616A0A1W2PRN6 198 aa12.09□□□□□ -0.47
PDAP1-204ENST00000496335 SLC22A31A6NKX4 558 aa12.09□□□□□ -0.47
PDAP1-204ENST00000496335 TCF21O43680 179 aa12.09□□□□□ -0.47
PDAP1-204ENST00000496335 FSTL3O95633 263 aa12.09□□□□□ -0.47
PDAP1-204ENST00000496335 ZNF12P17014 697 aa12.09□□□□□ -0.47
PDAP1-204ENST00000496335 EPHA1P21709 976 aa12.09□□□□□ -0.47
PDAP1-204ENST00000496335 GNALP38405 381 aa12.09□□□□□ -0.47
PDAP1-204ENST00000496335 CXCR4P61073 352 aa12.09□□□□□ -0.47
PDAP1-204ENST00000496335 GNB2P62879 340 aa12.09□□□□□ -0.47
PDAP1-204ENST00000496335 ROM1Q03395 351 aa12.09□□□□□ -0.47
PDAP1-204ENST00000496335 MZT1Q08AG7 82 aa12.09□□□□□ -0.47
PDAP1-204ENST00000496335 ZNF154Q13106 437 aa12.09□□□□□ -0.47
PDAP1-204ENST00000496335 OR8B8Q15620 311 aa12.09□□□□□ -0.47
PDAP1-204ENST00000496335 DEGS2Q6QHC5 323 aa12.09□□□□□ -0.47
PDAP1-204ENST00000496335 C11orf53Q8IXP5 236 aa12.09□□□□□ -0.47
PDAP1-204ENST00000496335 SLC35F2Q8IXU6 374 aa12.09□□□□□ -0.47
PDAP1-204ENST00000496335 ZNF679Q8IYX0 411 aa12.09□□□□□ -0.47
PDAP1-204ENST00000496335 CSNK2A3Q8NEV1 391 aa12.09□□□□□ -0.47
PDAP1-204ENST00000496335 NANPQ8TBE9 248 aa12.09□□□□□ -0.47
PDAP1-204ENST00000496335 ASB17Q8WXJ9 295 aa12.09□□□□□ -0.47
PDAP1-204ENST00000496335 NEIL1Q96FI4 390 aaPredicted RBP12.09□□□□□ -0.47
PDAP1-204ENST00000496335 OR8B4Q96RC9 309 aa12.09□□□□□ -0.47
PDAP1-204ENST00000496335 APOL4Q9BPW4 351 aa12.09□□□□□ -0.47
PDAP1-204ENST00000496335 RBM4BQ9BQ04 359 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms