RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 IGHG1P01857 330 aa7.77□□□□□ -1.17
SMARCAL1-213ENST00000496037 HNRNPCL4P0DMR1 293 aa7.77□□□□□ -1.17
SMARCAL1-213ENST00000496037 ADORA3P0DMS8 318 aa7.77□□□□□ -1.17
SMARCAL1-213ENST00000496037 MYL2P10916 166 aa7.77□□□□□ -1.17
SMARCAL1-213ENST00000496037 VDAC2P45880 294 aaPredicted RBP7.77□□□□□ -1.17
SMARCAL1-213ENST00000496037 MFAP4P55083 255 aa7.77□□□□□ -1.17
SMARCAL1-213ENST00000496037 CLRN1P58418 232 aa7.77□□□□□ -1.17
SMARCAL1-213ENST00000496037 UFM1P61960 85 aa7.77□□□□□ -1.17
SMARCAL1-213ENST00000496037 PRB3Q04118 309 aaPredicted RBP7.77□□□□□ -1.17
SMARCAL1-213ENST00000496037 KLRD1Q13241 179 aa7.77□□□□□ -1.17
SMARCAL1-213ENST00000496037 MELKQ14680 651 aa7.77□□□□□ -1.17
SMARCAL1-213ENST00000496037 IL23RQ5VWK5 629 aa7.77□□□□□ -1.17
SMARCAL1-213ENST00000496037 OR4F3Q6IEY1 312 aa7.77□□□□□ -1.17
SMARCAL1-213ENST00000496037 NHLRC1Q6VVB1 395 aa7.77□□□□□ -1.17
SMARCAL1-213ENST00000496037 SLC35D2Q76EJ3 337 aa7.77□□□□□ -1.17
SMARCAL1-213ENST00000496037 OR5AS1Q8N127 324 aa7.77□□□□□ -1.17
SMARCAL1-213ENST00000496037 PNKDQ8N490 385 aa7.77□□□□□ -1.17
SMARCAL1-213ENST00000496037 OR5AU1Q8NGC0 362 aa7.77□□□□□ -1.17
SMARCAL1-213ENST00000496037 OR13G1Q8NGZ3 307 aa7.77□□□□□ -1.17
SMARCAL1-213ENST00000496037 OR6S1Q8NH40 331 aa7.77□□□□□ -1.17
SMARCAL1-213ENST00000496037 PRR25Q96S07 402 aa7.77□□□□□ -1.17
SMARCAL1-213ENST00000496037 SLC35A5Q9BS91 424 aa7.77□□□□□ -1.17
SMARCAL1-213ENST00000496037 SPATA5L1Q9BVQ7 753 aa7.77□□□□□ -1.17
SMARCAL1-213ENST00000496037 MEGF9Q9H1U4 602 aa7.77□□□□□ -1.17
SMARCAL1-213ENST00000496037 TUBB1Q9H4B7 451 aa7.77□□□□□ -1.17
SMARCAL1-213ENST00000496037 MEAF6Q9HAF1 191 aa7.77□□□□□ -1.17
SMARCAL1-213ENST00000496037 SIAEQ9HAT2 523 aa7.77□□□□□ -1.17
SMARCAL1-213ENST00000496037 NANSQ9NR45 359 aa7.77□□□□□ -1.17
SMARCAL1-213ENST00000496037 SLC35D1Q9NTN3 355 aa7.77□□□□□ -1.17
SMARCAL1-213ENST00000496037 UTP11Q9Y3A2 253 aaKnown RBP7.77□□□□□ -1.17
SMARCAL1-213ENST00000496037 ABCA13Q86UQ4 5058 aa7.77□□□□□ -1.17
SMARCAL1-213ENST00000496037 HECTD4Q9Y4D8 3996 aa7.76□□□□□ -1.17
SMARCAL1-213ENST00000496037 NUP214P35658 2090 aaPredicted RBP7.76□□□□□ -1.17
SMARCAL1-213ENST00000496037 PLPP3O14495 311 aa7.76□□□□□ -1.17
SMARCAL1-213ENST00000496037 RGS16O15492 202 aaPredicted RBP7.76□□□□□ -1.17
SMARCAL1-213ENST00000496037 CPSF4O95639 269 aaKnown RBP7.76□□□□□ -1.17
SMARCAL1-213ENST00000496037 LHBP01229 141 aa7.76□□□□□ -1.17
SMARCAL1-213ENST00000496037 PGA4P0DJD7 388 aa7.76□□□□□ -1.17
SMARCAL1-213ENST00000496037 PGA3P0DJD8 388 aa7.76□□□□□ -1.17
SMARCAL1-213ENST00000496037 G6PDP11413 515 aa7.76□□□□□ -1.17
SMARCAL1-213ENST00000496037 ERVK-25P63136 954 aa7.76□□□□□ -1.17
SMARCAL1-213ENST00000496037 TXNL4AP83876 142 aaKnown RBP7.76□□□□□ -1.17
SMARCAL1-213ENST00000496037 PSG4Q00888 419 aa7.76□□□□□ -1.17
SMARCAL1-213ENST00000496037 OR8B8Q15620 311 aa7.76□□□□□ -1.17
SMARCAL1-213ENST00000496037 AANATQ16613 207 aa7.76□□□□□ -1.17
SMARCAL1-213ENST00000496037 PLA1AQ53H76 456 aa7.76□□□□□ -1.17
SMARCAL1-213ENST00000496037 ALG10BQ5I7T1 473 aa7.76□□□□□ -1.17
SMARCAL1-213ENST00000496037 NCR3LG1Q68D85 454 aa7.76□□□□□ -1.17
SMARCAL1-213ENST00000496037 CRIP3Q6Q6R5 217 aa7.76□□□□□ -1.17
SMARCAL1-213ENST00000496037 ANKRD46Q86W74 232 aa7.76□□□□□ -1.17
SMARCAL1-213ENST00000496037 RIMKLAQ8IXN7 391 aa7.76□□□□□ -1.17
SMARCAL1-213ENST00000496037 CLIP4Q8N3C7 705 aa7.76□□□□□ -1.17
SMARCAL1-213ENST00000496037 FNDC5Q8NAU1 212 aa7.76□□□□□ -1.17
SMARCAL1-213ENST00000496037 OR51D1Q8NGF3 324 aa7.76□□□□□ -1.17
SMARCAL1-213ENST00000496037 DNAJA4Q8WW22 397 aaPredicted RBP7.76□□□□□ -1.17
SMARCAL1-213ENST00000496037 DNAJC9Q8WXX5 260 aa7.76□□□□□ -1.17
SMARCAL1-213ENST00000496037 RORBQ92753 470 aa7.76□□□□□ -1.17
SMARCAL1-213ENST00000496037 CORO2AQ92828 525 aa7.76□□□□□ -1.17
SMARCAL1-213ENST00000496037 MCHR2Q969V1 340 aa7.76□□□□□ -1.17
SMARCAL1-213ENST00000496037 ZNF583Q96ND8 569 aa7.76□□□□□ -1.17
SMARCAL1-213ENST00000496037 PRSS22Q9GZN4 317 aa7.76□□□□□ -1.17
SMARCAL1-213ENST00000496037 SCPEP1Q9HB40 452 aa7.76□□□□□ -1.17
SMARCAL1-213ENST00000496037 TRIM36Q9NQ86 728 aa7.76□□□□□ -1.17
SMARCAL1-213ENST00000496037 IGKV1D-42A0A075B6H8 117 aa7.75□□□□□ -1.17
SMARCAL1-213ENST00000496037 MAGEA13PA6NCF6 341 aa7.75□□□□□ -1.17
SMARCAL1-213ENST00000496037 PRSS29PA6NIE9 313 aa7.75□□□□□ -1.17
SMARCAL1-213ENST00000496037 TEX22C9J3V5 150 aa7.75□□□□□ -1.17
SMARCAL1-213ENST00000496037 F5H5P2 479 aa7.75□□□□□ -1.17
SMARCAL1-213ENST00000496037 LGALS8O00214 317 aa7.75□□□□□ -1.17
SMARCAL1-213ENST00000496037 SLC33A1O00400 549 aaPredicted RBP7.75□□□□□ -1.17
SMARCAL1-213ENST00000496037 DVL1O14640 695 aa7.75□□□□□ -1.17
SMARCAL1-213ENST00000496037 NDUFA2O43678 99 aa7.75□□□□□ -1.17
SMARCAL1-213ENST00000496037 BGLAPP02818 100 aa7.75□□□□□ -1.17
SMARCAL1-213ENST00000496037 SNRPAP09012 282 aaKnown RBP7.75□□□□□ -1.17
SMARCAL1-213ENST00000496037 TMEM11P17152 192 aa7.75□□□□□ -1.17
SMARCAL1-213ENST00000496037 PMELP40967 661 aa7.75□□□□□ -1.17
SMARCAL1-213ENST00000496037 HTR5AP47898 357 aa7.75□□□□□ -1.17
SMARCAL1-213ENST00000496037 CAMLGP49069 296 aa7.75□□□□□ -1.17
SMARCAL1-213ENST00000496037 ERFP50548 548 aa7.75□□□□□ -1.17
SMARCAL1-213ENST00000496037 RASSF2P50749 326 aa7.75□□□□□ -1.17
SMARCAL1-213ENST00000496037 UBE2E1P51965 193 aa7.75□□□□□ -1.17
SMARCAL1-213ENST00000496037 HOXC5Q00444 222 aa7.75□□□□□ -1.17
SMARCAL1-213ENST00000496037 KANK2Q63ZY3 851 aa7.75□□□□□ -1.17
SMARCAL1-213ENST00000496037 SFRP4Q6FHJ7 346 aaPredicted RBP7.75□□□□□ -1.17
SMARCAL1-213ENST00000496037 RBPMS2Q6ZRY4 209 aaKnown RBP7.75□□□□□ -1.17
SMARCAL1-213ENST00000496037 FAM185AQ8N0U4 392 aa7.75□□□□□ -1.17
SMARCAL1-213ENST00000496037 BOLLQ8N9W6 283 aaKnown RBP7.75□□□□□ -1.17
SMARCAL1-213ENST00000496037 TWIST2Q8WVJ9 160 aa7.75□□□□□ -1.17
SMARCAL1-213ENST00000496037 ERGIC1Q969X5 290 aa7.75□□□□□ -1.17
SMARCAL1-213ENST00000496037 HAVCR1Q96D42 359 aa7.75□□□□□ -1.17
SMARCAL1-213ENST00000496037 CCDC115Q96NT0 180 aa7.75□□□□□ -1.17
SMARCAL1-213ENST00000496037 FMO2Q99518 471 aa7.75□□□□□ -1.17
SMARCAL1-213ENST00000496037 CDCA4Q9BXL8 241 aa7.75□□□□□ -1.17
SMARCAL1-213ENST00000496037 ROPN1BQ9BZX4 212 aaPredicted RBP7.75□□□□□ -1.17
SMARCAL1-213ENST00000496037 OR2H1Q9GZK4 316 aa7.75□□□□□ -1.17
SMARCAL1-213ENST00000496037 ROPN1Q9HAT0 212 aaPredicted RBP7.75□□□□□ -1.17
SMARCAL1-213ENST00000496037 C20orf141Q9NUB4 165 aa7.75□□□□□ -1.17
SMARCAL1-213ENST00000496037 CALML5Q9NZT1 146 aa7.75□□□□□ -1.17
SMARCAL1-213ENST00000496037 DNAJC15Q9Y5T4 150 aa7.75□□□□□ -1.17
SMARCAL1-213ENST00000496037 TRAV38-1A0A0B4J264 116 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms