RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 PGA3P0DJD8 388 aa11.51□□□□□ -0.57
PTPN7-217ENST00000495688 SFTPDP35247 375 aa11.51□□□□□ -0.57
PTPN7-217ENST00000495688 PDSS1Q5T2R2 415 aa11.51□□□□□ -0.57
PTPN7-217ENST00000495688 NAA40Q86UY6 237 aa11.51□□□□□ -0.57
PTPN7-217ENST00000495688 TMEM200AQ86VY9 491 aa11.51□□□□□ -0.57
PTPN7-217ENST00000495688 TMED6Q8WW62 240 aa11.51□□□□□ -0.57
PTPN7-217ENST00000495688 PHYHIPLQ96FC7 376 aa11.51□□□□□ -0.57
PTPN7-217ENST00000495688 SLC39A1Q9NY26 324 aa11.51□□□□□ -0.57
PTPN7-217ENST00000495688 PPP4R1LQ9P1A2 415 aa11.51□□□□□ -0.57
PTPN7-217ENST00000495688 NPIPB13A6NJU9 1138 aa11.5□□□□□ -0.57
PTPN7-217ENST00000495688 NPIPB4C9JG80 1138 aa11.5□□□□□ -0.57
PTPN7-217ENST00000495688 ZNF878C9JN71 531 aa11.5□□□□□ -0.57
PTPN7-217ENST00000495688 CRTAPO75718 401 aaPredicted RBP11.5□□□□□ -0.57
PTPN7-217ENST00000495688 F12P00748 615 aaPredicted RBP11.5□□□□□ -0.57
PTPN7-217ENST00000495688 HEXBP07686 556 aa11.5□□□□□ -0.57
PTPN7-217ENST00000495688 HCKP08631 526 aa11.5□□□□□ -0.57
PTPN7-217ENST00000495688 GLULP15104 373 aa11.5□□□□□ -0.57
PTPN7-217ENST00000495688 HIST1H1DP16402 221 aaKnown RBP11.5□□□□□ -0.57
PTPN7-217ENST00000495688 PLPPR5Q32ZL2 321 aa11.5□□□□□ -0.57
PTPN7-217ENST00000495688 C1QL2Q7Z5L3 287 aa11.5□□□□□ -0.57
PTPN7-217ENST00000495688 DTX1Q86Y01 620 aa11.5□□□□□ -0.57
PTPN7-217ENST00000495688 UEVLDQ8IX04 471 aa11.5□□□□□ -0.57
PTPN7-217ENST00000495688 OR2AJ1Q8NGZ0 328 aa11.5□□□□□ -0.57
PTPN7-217ENST00000495688 OR6S1Q8NH40 331 aa11.5□□□□□ -0.57
PTPN7-217ENST00000495688 OR5B2Q96R09 309 aa11.5□□□□□ -0.57
PTPN7-217ENST00000495688 ZNF416Q9BWM5 594 aa11.5□□□□□ -0.57
PTPN7-217ENST00000495688 LHX6Q9UPM6 363 aa11.5□□□□□ -0.57
PTPN7-217ENST00000495688 ADAMTS9Q9P2N4 1935 aa11.5□□□□□ -0.57
PTPN7-217ENST00000495688 COL6A3P12111 3177 aa11.5□□□□□ -0.57
PTPN7-217ENST00000495688 IGKV1-9A0A0C4DH69 117 aa11.5□□□□□ -0.57
PTPN7-217ENST00000495688 ABCD4O14678 606 aa11.5□□□□□ -0.57
PTPN7-217ENST00000495688 ZNF41P51814 821 aaPredicted RBP11.5□□□□□ -0.57
PTPN7-217ENST00000495688 SMAD4Q13485 552 aaKnown RBP11.5□□□□□ -0.57
PTPN7-217ENST00000495688 SGCAQ16586 387 aa11.5□□□□□ -0.57
PTPN7-217ENST00000495688 TMEM128Q5BJH2 165 aa11.5□□□□□ -0.57
PTPN7-217ENST00000495688 THEM4Q5T1C6 240 aa11.5□□□□□ -0.57
PTPN7-217ENST00000495688 FAHD2BQ6P2I3 314 aaPredicted RBP11.5□□□□□ -0.57
PTPN7-217ENST00000495688 TMEM71Q6P5X7 295 aa11.5□□□□□ -0.57
PTPN7-217ENST00000495688 CLEC18BQ6UXF7 455 aa11.5□□□□□ -0.57
PTPN7-217ENST00000495688 FAM57BQ71RH2 274 aa11.5□□□□□ -0.57
PTPN7-217ENST00000495688 PUSL1Q8N0Z8 303 aaKnown RBP11.5□□□□□ -0.57
PTPN7-217ENST00000495688 GTPBP8Q8N3Z3 284 aaPredicted RBP11.5□□□□□ -0.57
PTPN7-217ENST00000495688 CLRN3Q8NCR9 226 aa11.5□□□□□ -0.57
PTPN7-217ENST00000495688 NOXO1Q8NFA2 376 aa11.5□□□□□ -0.57
PTPN7-217ENST00000495688 FAHD2AQ96GK7 314 aa11.5□□□□□ -0.57
PTPN7-217ENST00000495688 LIN37Q96GY3 246 aaPredicted RBP11.5□□□□□ -0.57
PTPN7-217ENST00000495688 GPER1Q99527 375 aa11.5□□□□□ -0.57
PTPN7-217ENST00000495688 ST6GALNAC5Q9BVH7 336 aa11.5□□□□□ -0.57
PTPN7-217ENST00000495688 TMEM59Q9BXS4 323 aa11.5□□□□□ -0.57
PTPN7-217ENST00000495688 PIGMQ9H3S5 423 aa11.5□□□□□ -0.57
PTPN7-217ENST00000495688 TMEM231Q9H6L2 316 aa11.5□□□□□ -0.57
PTPN7-217ENST00000495688 OR5AC2Q9NZP5 309 aa11.5□□□□□ -0.57
PTPN7-217ENST00000495688 TRAF3IP2O43734 574 aaPredicted RBP11.49□□□□□ -0.57
PTPN7-217ENST00000495688 OR2J2O76002 312 aa11.49□□□□□ -0.57
PTPN7-217ENST00000495688 ATG12O94817 140 aa11.49□□□□□ -0.57
PTPN7-217ENST00000495688 GLB1P16278 677 aa11.49□□□□□ -0.57
PTPN7-217ENST00000495688 P2RY4P51582 365 aa11.49□□□□□ -0.57
PTPN7-217ENST00000495688 GPR85P60893 370 aa11.49□□□□□ -0.57
PTPN7-217ENST00000495688 SUPT4H1P63272 117 aaKnown RBP11.49□□□□□ -0.57
PTPN7-217ENST00000495688 GABREP78334 506 aa11.49□□□□□ -0.57
PTPN7-217ENST00000495688 PLEKHN1Q494U1 663 aaPredicted RBP11.49□□□□□ -0.57
PTPN7-217ENST00000495688 TSNAXQ99598 290 aaKnown RBP11.49□□□□□ -0.57
PTPN7-217ENST00000495688 WDR77Q9BQA1 342 aaPredicted RBP11.49□□□□□ -0.57
PTPN7-217ENST00000495688 CYTL1Q9NRR1 136 aa11.49□□□□□ -0.57
PTPN7-217ENST00000495688 GPR132Q9UNW8 380 aa11.49□□□□□ -0.57
PTPN7-217ENST00000495688 A0A1W2PNV4 684 aa11.49□□□□□ -0.57
PTPN7-217ENST00000495688 TMEM218A2RU14 115 aa11.49□□□□□ -0.57
PTPN7-217ENST00000495688 PTGDSP41222 190 aa11.49□□□□□ -0.57
PTPN7-217ENST00000495688 DHPSP49366 369 aaPredicted RBP11.49□□□□□ -0.57
PTPN7-217ENST00000495688 ANKRD55Q3KP44 614 aa11.49□□□□□ -0.57
PTPN7-217ENST00000495688 ZNF574Q6ZN55 896 aaPredicted RBP11.49□□□□□ -0.57
PTPN7-217ENST00000495688 OR51F2Q8NH61 342 aa11.49□□□□□ -0.57
PTPN7-217ENST00000495688 OR10C1Q96KK4 312 aa11.49□□□□□ -0.57
PTPN7-217ENST00000495688 PNRC2Q9NPJ4 139 aaKnown RBP11.49□□□□□ -0.57
PTPN7-217ENST00000495688 PCDHB16Q9NRJ7 776 aa11.49□□□□□ -0.57
PTPN7-217ENST00000495688 ADAMTS20P59510 1910 aa11.48□□□□□ -0.57
PTPN7-217ENST00000495688 WDPCPO95876 746 aa11.48□□□□□ -0.57
PTPN7-217ENST00000495688 IGHG1P01857 330 aa11.48□□□□□ -0.57
PTPN7-217ENST00000495688 QDPRP09417 244 aa11.48□□□□□ -0.57
PTPN7-217ENST00000495688 GLRA1P23415 457 aa11.48□□□□□ -0.57
PTPN7-217ENST00000495688 CX3CR1P49238 355 aa11.48□□□□□ -0.57
PTPN7-217ENST00000495688 ARFRP1Q13795 201 aa11.48□□□□□ -0.57
PTPN7-217ENST00000495688 NKAIN1Q4KMZ8 207 aa11.48□□□□□ -0.57
PTPN7-217ENST00000495688 RHBDD2Q6NTF9 364 aa11.48□□□□□ -0.57
PTPN7-217ENST00000495688 ESX1Q8N693 406 aa11.48□□□□□ -0.57
PTPN7-217ENST00000495688 RTBDNQ9BSG5 229 aaPredicted RBP11.48□□□□□ -0.57
PTPN7-217ENST00000495688 METTL7AQ9H8H3 244 aa11.48□□□□□ -0.57
PTPN7-217ENST00000495688 CEP192Q8TEP8 1941 aa11.48□□□□□ -0.57
PTPN7-217ENST00000495688 TEX13DA0A0J9YY54 714 aaPredicted RBP11.48□□□□□ -0.57
PTPN7-217ENST00000495688 F8VVB4 439 aa11.48□□□□□ -0.57
PTPN7-217ENST00000495688 F8VWA3 439 aa11.48□□□□□ -0.57
PTPN7-217ENST00000495688 CHRM2P08172 466 aa11.48□□□□□ -0.57
PTPN7-217ENST00000495688 NKAPLQ5M9Q1 402 aa11.48□□□□□ -0.57
PTPN7-217ENST00000495688 PGAP1Q75T13 922 aa11.48□□□□□ -0.57
PTPN7-217ENST00000495688 BAP18Q8IXM2 172 aa11.48□□□□□ -0.57
PTPN7-217ENST00000495688 ZNF283Q8N7M2 679 aa11.48□□□□□ -0.57
PTPN7-217ENST00000495688 OR13G1Q8NGZ3 307 aa11.48□□□□□ -0.57
PTPN7-217ENST00000495688 KCNG3Q8TAE7 436 aa11.48□□□□□ -0.57
PTPN7-217ENST00000495688 OR6C1Q96RD1 312 aa11.48□□□□□ -0.57
PTPN7-217ENST00000495688 AKIRIN1Q9H9L7 192 aaPredicted RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms