RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 ZNF391Q9UJN7 358 aa13.45□□□□□ -0.26
LIME1-209ENST00000494776 HIVEP2P31629 2446 aa13.44□□□□□ -0.26
LIME1-209ENST00000494776 PRR32B1ATL7 298 aa13.44□□□□□ -0.26
LIME1-209ENST00000494776 LOC110117498-PIK3R3F6TDL0 507 aa13.44□□□□□ -0.26
LIME1-209ENST00000494776 TMEM178BH3BS89 294 aa13.44□□□□□ -0.26
LIME1-209ENST00000494776 MAGEB4O15481 346 aaPredicted RBP13.44□□□□□ -0.26
LIME1-209ENST00000494776 MPZL2O60487 215 aa13.44□□□□□ -0.26
LIME1-209ENST00000494776 CRLF1O75462 422 aa13.44□□□□□ -0.26
LIME1-209ENST00000494776 CYB5R3P00387 301 aaPredicted RBP13.44□□□□□ -0.26
LIME1-209ENST00000494776 KRT8P05787 483 aa13.44□□□□□ -0.26
LIME1-209ENST00000494776 RBMXP38159 391 aaKnown RBP13.44□□□□□ -0.26
LIME1-209ENST00000494776 MTNR1AP48039 350 aa13.44□□□□□ -0.26
LIME1-209ENST00000494776 LMO4P61968 165 aa13.44□□□□□ -0.26
LIME1-209ENST00000494776 BTG1P62324 171 aa13.44□□□□□ -0.26
LIME1-209ENST00000494776 MAB21L1Q13394 359 aa13.44□□□□□ -0.26
LIME1-209ENST00000494776 PRAMEF6Q5VXH4 476 aa13.44□□□□□ -0.26
LIME1-209ENST00000494776 C1orf87Q8N0U7 546 aa13.44□□□□□ -0.26
LIME1-209ENST00000494776 KLHL36Q8N4N3 616 aa13.44□□□□□ -0.26
LIME1-209ENST00000494776 YIPF7Q8N8F6 280 aa13.44□□□□□ -0.26
LIME1-209ENST00000494776 ERGIC1Q969X5 290 aa13.44□□□□□ -0.26
LIME1-209ENST00000494776 RNFT2Q96EX2 444 aa13.44□□□□□ -0.26
LIME1-209ENST00000494776 PAPOLGQ9BWT3 736 aaKnown RBP13.44□□□□□ -0.26
LIME1-209ENST00000494776 PBOV1Q9GZY1 135 aa13.44□□□□□ -0.26
LIME1-209ENST00000494776 FN3KRPQ9HA64 309 aa13.44□□□□□ -0.26
LIME1-209ENST00000494776 UFSP2Q9NUQ7 469 aa13.44□□□□□ -0.26
LIME1-209ENST00000494776 C14orf119Q9NWQ9 140 aa13.44□□□□□ -0.26
LIME1-209ENST00000494776 FAM118AQ9NWS6 357 aa13.44□□□□□ -0.26
LIME1-209ENST00000494776 SMPD3Q9NY59 655 aaPredicted RBP13.44□□□□□ -0.26
LIME1-209ENST00000494776 ZANQ9Y493 2812 aa13.44□□□□□ -0.26
LIME1-209ENST00000494776 ABCA1O95477 2261 aa13.43□□□□□ -0.26
LIME1-209ENST00000494776 A0A1W2PQL4 384 aaPredicted RBP13.43□□□□□ -0.26
LIME1-209ENST00000494776 ERICH4A6NGS2 130 aa13.43□□□□□ -0.26
LIME1-209ENST00000494776 RPP14O95059 124 aaKnown RBP13.43□□□□□ -0.26
LIME1-209ENST00000494776 IGHV2-70P01814 119 aa13.43□□□□□ -0.26
LIME1-209ENST00000494776 GRPP07492 148 aa13.43□□□□□ -0.26
LIME1-209ENST00000494776 GATA4P43694 442 aa13.43□□□□□ -0.26
LIME1-209ENST00000494776 OCLNQ16625 522 aa13.43□□□□□ -0.26
LIME1-209ENST00000494776 CHRFAM7AQ494W8 412 aa13.43□□□□□ -0.26
LIME1-209ENST00000494776 SLC25A30Q5SVS4 291 aa13.43□□□□□ -0.26
LIME1-209ENST00000494776 LPCAT4Q643R3 524 aa13.43□□□□□ -0.26
LIME1-209ENST00000494776 GLCCI1Q86VQ1 547 aa13.43□□□□□ -0.26
LIME1-209ENST00000494776 SPICQ8N5J4 248 aa13.43□□□□□ -0.26
LIME1-209ENST00000494776 OR51F2Q8NH61 342 aa13.43□□□□□ -0.26
LIME1-209ENST00000494776 C1orf159Q96HA4 380 aa13.43□□□□□ -0.26
LIME1-209ENST00000494776 Q96MT0 163 aa13.43□□□□□ -0.26
LIME1-209ENST00000494776 RDH12Q96NR8 316 aa13.43□□□□□ -0.26
LIME1-209ENST00000494776 BEX2Q9BXY8 128 aa13.43□□□□□ -0.26
LIME1-209ENST00000494776 SHARPINQ9H0F6 387 aa13.43□□□□□ -0.26
LIME1-209ENST00000494776 C8orf4Q9NR00 106 aa13.43□□□□□ -0.26
LIME1-209ENST00000494776 AASSQ9UDR5 926 aa13.43□□□□□ -0.26
LIME1-209ENST00000494776 RHBDD3Q9Y3P4 386 aa13.43□□□□□ -0.26
LIME1-209ENST00000494776 TLN2Q9Y4G6 2542 aa13.42□□□□□ -0.26
LIME1-209ENST00000494776 A0A0U1RQV5 110 aa13.42□□□□□ -0.26
LIME1-209ENST00000494776 A6NLC8 198 aa13.42□□□□□ -0.26
LIME1-209ENST00000494776 ANXA2P2A6NMY6 339 aa13.42□□□□□ -0.26
LIME1-209ENST00000494776 FAM157AC9JC47 383 aa13.42□□□□□ -0.26
LIME1-209ENST00000494776 E9PQ18 207 aa13.42□□□□□ -0.26
LIME1-209ENST00000494776 ZNF205O95201 554 aa13.42□□□□□ -0.26
LIME1-209ENST00000494776 IGHV2-5P01817 119 aa13.42□□□□□ -0.26
LIME1-209ENST00000494776 HNF1AP20823 631 aa13.42□□□□□ -0.26
LIME1-209ENST00000494776 MDH2P40926 338 aaKnown RBP13.42□□□□□ -0.26
LIME1-209ENST00000494776 MAP2K3P46734 347 aa13.42□□□□□ -0.26
LIME1-209ENST00000494776 MFGE8Q08431 387 aaPredicted RBP13.42□□□□□ -0.26
LIME1-209ENST00000494776 OR8B8Q15620 311 aa13.42□□□□□ -0.26
LIME1-209ENST00000494776 MPPED2Q15777 294 aa13.42□□□□□ -0.26
LIME1-209ENST00000494776 ZNF181Q2M3W8 571 aa13.42□□□□□ -0.26
LIME1-209ENST00000494776 BCL2L15Q5TBC7 163 aa13.42□□□□□ -0.26
LIME1-209ENST00000494776 PLEKHG7Q6ZR37 379 aa13.42□□□□□ -0.26
LIME1-209ENST00000494776 SSX6Q7RTT6 188 aa13.42□□□□□ -0.26
LIME1-209ENST00000494776 FAM220AQ7Z4H9 259 aa13.42□□□□□ -0.26
LIME1-209ENST00000494776 ENTHD1Q8IYW4 607 aa13.42□□□□□ -0.26
LIME1-209ENST00000494776 MUC20Q8N307 709 aaPredicted RBP13.42□□□□□ -0.26
LIME1-209ENST00000494776 OR51E1Q8TCB6 317 aa13.42□□□□□ -0.26
LIME1-209ENST00000494776 PIGCQ92535 297 aa13.42□□□□□ -0.26
LIME1-209ENST00000494776 FAM71F1Q96KD3 344 aaPredicted RBP13.42□□□□□ -0.26
LIME1-209ENST00000494776 LYZL4Q96KX0 146 aa13.42□□□□□ -0.26
LIME1-209ENST00000494776 SIGLEC11Q96RL6 698 aa13.42□□□□□ -0.26
LIME1-209ENST00000494776 MOB1AQ9H8S9 216 aa13.42□□□□□ -0.26
LIME1-209ENST00000494776 TMEM160Q9NX00 188 aa13.42□□□□□ -0.26
LIME1-209ENST00000494776 NUFIP1Q9UHK0 495 aaKnown RBP13.42□□□□□ -0.26
LIME1-209ENST00000494776 MRM2Q9UI43 246 aaKnown RBP13.42□□□□□ -0.26
LIME1-209ENST00000494776 CDC42EP3Q9UKI2 254 aa13.42□□□□□ -0.26
LIME1-209ENST00000494776 OR52A1Q9UKL2 312 aa13.42□□□□□ -0.26
LIME1-209ENST00000494776 SNX5Q9Y5X3 404 aa13.42□□□□□ -0.26
LIME1-209ENST00000494776 R4GMQ9 66 aa13.42□□□□□ -0.26
LIME1-209ENST00000494776 DYSFO75923 2080 aa13.42□□□□□ -0.26
LIME1-209ENST00000494776 YLPM1P49750 1951 aaKnown RBP13.41□□□□□ -0.26
LIME1-209ENST00000494776 NSD1Q96L73 2696 aaPredicted RBP13.41□□□□□ -0.26
LIME1-209ENST00000494776 DAPL1A0PJW8 107 aa13.41□□□□□ -0.26
LIME1-209ENST00000494776 METTL15A6NJ78 407 aa13.41□□□□□ -0.26
LIME1-209ENST00000494776 SLC16A6O15403 523 aa13.41□□□□□ -0.26
LIME1-209ENST00000494776 FAM20BO75063 409 aa13.41□□□□□ -0.26
LIME1-209ENST00000494776 MSMBP08118 114 aa13.41□□□□□ -0.26
LIME1-209ENST00000494776 PCMT1P22061 227 aa13.41□□□□□ -0.26
LIME1-209ENST00000494776 PEX2P28328 305 aa13.41□□□□□ -0.26
LIME1-209ENST00000494776 PMELP40967 661 aa13.41□□□□□ -0.26
LIME1-209ENST00000494776 DVL1P1P54792 670 aaPredicted RBP13.41□□□□□ -0.26
LIME1-209ENST00000494776 ACTC1P68032 377 aa13.41□□□□□ -0.26
LIME1-209ENST00000494776 ACTA1P68133 377 aa13.41□□□□□ -0.26
LIME1-209ENST00000494776 IL5RAQ01344 420 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms