RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 GCNT6Q5T4J0 391 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 REEP3Q6NUK4 255 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 RPL13AP3Q6NVV1 102 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 PRSS54Q6PEW0 395 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 RBMS3Q6XE24 437 aaKnown RBP2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 TEX43Q6ZNM6 134 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 DPPA4Q7L190 304 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 DCAF4L2Q8NA75 395 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 ZSCAN4Q8NAM6 433 aaPredicted RBP2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 UBAC2Q8NBM4 344 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 C11orf65Q8NCR3 313 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 DNAAF1Q8NEP3 725 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 GPRC5AQ8NFJ5 357 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 OR51A2Q8NGJ7 313 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 WFIKKN2Q8TEU8 576 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 WBP2Q969T9 261 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 ZNF689Q96CS4 500 aaPredicted RBP2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 SLC25A21Q9BQT8 299 aaPredicted RBP2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 ABHD14AQ9BUJ0 271 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 TM2D1Q9BX74 207 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 MRPL13Q9BYD1 178 aaKnown RBP2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 NPFFR1Q9GZQ6 430 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 MAP6D1Q9H9H5 199 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 BIN3Q9NQY0 253 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 SLC22A11Q9NSA0 550 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 UQCC1Q9NVA1 299 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 C1RLQ9NZP8 487 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 KLHL8Q9P2G9 620 aaPredicted RBP2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 HSPB7Q9UBY9 170 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 TP53TG3Q9ULZ0 132 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 BAIAP2Q9UQB8 552 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 GAB2Q9UQC2 676 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 VSIG4Q9Y279 399 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 HSPB11Q9Y547 144 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 PCYT1BQ9Y5K3 369 aaPredicted RBP2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 GXYLT2A0PJZ3 443 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 OR6C74A6NCV1 312 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 NCF1BA6NI72 391 aaPredicted RBP2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 OR4C45A6NMZ5 311 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 C4orf47A7E2U8 309 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 NCF1CA8MVU1 366 aaPredicted RBP2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 TMEM14DPA8MWL7 114 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 CDRT15L2A8MXV6 281 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 SLC25A14O95258 325 aaPredicted RBP2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 PMS2P2O95744 297 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 AIFM1O95831 613 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 HLA-DPB1P04440 258 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 REG1AP05451 166 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 DANCRP0C864 163 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 ZNF17P17021 662 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 ZNF3P17036 446 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 TBPP20226 339 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 S100PP25815 95 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 RPL3P39023 403 aaKnown RBP2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 ATP5IP56385 69 aaPredicted RBP2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 CLDN12P56749 244 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 CDC42P60953 191 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 RPL15P61313 204 aaKnown RBP2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 TSPAN5P62079 268 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 RPL38P63173 70 aaKnown RBP2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 PITPNAQ00169 270 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 SCGB2A2Q13296 93 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 DDX39BQ13838 428 aaKnown RBP2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 ELOBQ15370 118 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 HAGHQ16775 308 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 TMEM241Q24JQ0 296 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 FAM76BQ5HYJ3 339 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 CLLU1OSQ5K130 101 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 BCL2L15Q5TBC7 163 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 LIPKQ5VXJ0 399 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 HAGHLQ6PII5 290 aaPredicted RBP2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 DPPA3Q6W0C5 159 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 NDUFAF7Q7L592 441 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 LDB1Q86U70 411 aaPredicted RBP2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 GAPTQ8N292 157 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 RNF175Q8N4F7 328 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 ZNF565Q8N9K5 539 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 DNAAF3Q8N9W5 541 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 APCDD1LQ8NCL9 501 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 OR2AP1Q8NGE2 309 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 OR52N4Q8NGI2 321 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 OR52M1Q8NGK5 317 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 PAQR8Q8TEZ7 354 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 SPRYD4Q8WW59 207 aaPredicted RBP2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 CORO2AQ92828 525 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 SEH1LQ96EE3 360 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 SCRN2Q96FV2 425 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 ABHD14BQ96IU4 210 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 SLC41A2Q96JW4 573 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 AMDHD1Q96NU7 426 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 SRSF8Q9BRL6 282 aaKnown RBP2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 BEX4Q9NWD9 120 aaPredicted RBP2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 TEX10Q9NXF1 929 aaPredicted RBP2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 WSB2Q9NYS7 404 aaPredicted RBP2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 TRPC4Q9UBN4 977 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 SMPXQ9UHP9 88 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 KLK13Q9UKR3 277 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 SSR3Q9UNL2 185 aa2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 MRPS7Q9Y2R9 242 aaKnown RBP2.19□□□□□ -2.06
CDC42EP3-205ENST00000494083 UBE2J1Q9Y385 318 aaPredicted RBP2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms