RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 SGTBQ96EQ0 304 aa1.61□□□□□ -2.15
ITGB1-216ENST00000493758 MARVELD1Q9BSK0 173 aa1.61□□□□□ -2.15
ITGB1-216ENST00000493758 EMC6Q9BV81 110 aa1.61□□□□□ -2.15
ITGB1-216ENST00000493758 ZYG11BQ9C0D3 744 aa1.61□□□□□ -2.15
ITGB1-216ENST00000493758 ACTR3CQ9C0K3 210 aaPredicted RBP1.61□□□□□ -2.15
ITGB1-216ENST00000493758 PITPNC1Q9UKF7 332 aa1.61□□□□□ -2.15
ITGB1-216ENST00000493758 A8MWL6 223 aa1.6□□□□□ -2.15
ITGB1-216ENST00000493758 WBP4O75554 376 aaKnown RBP1.6□□□□□ -2.15
ITGB1-216ENST00000493758 SCO1O75880 301 aa1.6□□□□□ -2.15
ITGB1-216ENST00000493758 MMP7P09237 267 aaPredicted RBP1.6□□□□□ -2.15
ITGB1-216ENST00000493758 MYL2P10916 166 aa1.6□□□□□ -2.15
ITGB1-216ENST00000493758 EIF2S2P20042 333 aaKnown RBP1.6□□□□□ -2.15
ITGB1-216ENST00000493758 BCKDHBP21953 392 aa1.6□□□□□ -2.15
ITGB1-216ENST00000493758 TGM4P49221 684 aa1.6□□□□□ -2.15
ITGB1-216ENST00000493758 OPN5Q6U736 354 aa1.6□□□□□ -2.15
ITGB1-216ENST00000493758 LINC00336Q6ZUF6 198 aa1.6□□□□□ -2.15
ITGB1-216ENST00000493758 HORMAD1Q86X24 394 aa1.6□□□□□ -2.15
ITGB1-216ENST00000493758 SNX31Q8N9S9 440 aa1.6□□□□□ -2.15
ITGB1-216ENST00000493758 TTC29Q8NA56 475 aaPredicted RBP1.6□□□□□ -2.15
ITGB1-216ENST00000493758 RETNQ9HD89 108 aa1.6□□□□□ -2.15
ITGB1-216ENST00000493758 TAS2R5Q9NYW4 299 aa1.6□□□□□ -2.15
ITGB1-216ENST00000493758 RPRD2Q5VT52 1461 aaKnown RBP1.6□□□□□ -2.15
ITGB1-216ENST00000493758 TSPOAP1O95153 1857 aa1.59□□□□□ -2.15
ITGB1-216ENST00000493758 SYNJ2BP-COX16A0A087WUM0 186 aa1.59□□□□□ -2.15
ITGB1-216ENST00000493758 GOLGA8OA6NCC3 632 aa1.59□□□□□ -2.15
ITGB1-216ENST00000493758 GOLGA8NF8WBI6 632 aa1.59□□□□□ -2.15
ITGB1-216ENST00000493758 CLDN34H7C241 214 aa1.59□□□□□ -2.15
ITGB1-216ENST00000493758 EIF3HO15372 352 aaKnown RBP eCLIP1.59□□□□□ -2.15
ITGB1-216ENST00000493758 ERI3O43414 337 aaKnown RBP1.59□□□□□ -2.15
ITGB1-216ENST00000493758 SLC16A7O60669 478 aa1.59□□□□□ -2.15
ITGB1-216ENST00000493758 FGFR1OPO95684 399 aaKnown RBP1.59□□□□□ -2.15
ITGB1-216ENST00000493758 IGHV1-46P01743 117 aa1.59□□□□□ -2.15
ITGB1-216ENST00000493758 CD28P10747 220 aa1.59□□□□□ -2.15
ITGB1-216ENST00000493758 CTRB1P17538 263 aa1.59□□□□□ -2.15
ITGB1-216ENST00000493758 MPIP34949 423 aa1.59□□□□□ -2.15
ITGB1-216ENST00000493758 MYCNOSP40205 109 aa1.59□□□□□ -2.15
ITGB1-216ENST00000493758 GZMMP51124 257 aa1.59□□□□□ -2.15
ITGB1-216ENST00000493758 BIKQ13323 160 aa1.59□□□□□ -2.15
ITGB1-216ENST00000493758 NAB1Q13506 487 aa1.59□□□□□ -2.15
ITGB1-216ENST00000493758 ARMC12Q5T9G4 340 aa1.59□□□□□ -2.15
ITGB1-216ENST00000493758 MFSD14CQ5VZR4 134 aa1.59□□□□□ -2.15
ITGB1-216ENST00000493758 LRRC66Q68CR7 880 aa1.59□□□□□ -2.15
ITGB1-216ENST00000493758 WDR59Q6PJI9 974 aa1.59□□□□□ -2.15
ITGB1-216ENST00000493758 SPNS3Q6ZMD2 512 aa1.59□□□□□ -2.15
ITGB1-216ENST00000493758 TCF24Q7RTU0 167 aa1.59□□□□□ -2.15
ITGB1-216ENST00000493758 DAZ4Q86SG3 579 aaKnown RBP1.59□□□□□ -2.15
ITGB1-216ENST00000493758 PLIN2Q99541 437 aa1.59□□□□□ -2.15
ITGB1-216ENST00000493758 PDCD1LG2Q9BQ51 273 aa1.59□□□□□ -2.15
ITGB1-216ENST00000493758 C20orf24Q9BUV8 137 aa1.59□□□□□ -2.15
ITGB1-216ENST00000493758 DAZ1Q9NQZ3 744 aaKnown RBP1.59□□□□□ -2.15
ITGB1-216ENST00000493758 LYARQ9NX58 379 aaKnown RBP1.59□□□□□ -2.15
ITGB1-216ENST00000493758 SAR1BQ9Y6B6 198 aa1.59□□□□□ -2.15
ITGB1-216ENST00000493758 ITGB4P16144 1822 aa1.59□□□□□ -2.16
ITGB1-216ENST00000493758 CCL15-CCL14A0A0B4J2E2 113 aa1.58□□□□□ -2.16
ITGB1-216ENST00000493758 ANKRD65E5RJM6 399 aa1.58□□□□□ -2.16
ITGB1-216ENST00000493758 NME4O00746 187 aa1.58□□□□□ -2.16
ITGB1-216ENST00000493758 CIB2O75838 187 aa1.58□□□□□ -2.16
ITGB1-216ENST00000493758 PRKACBP22694 351 aa1.58□□□□□ -2.16
ITGB1-216ENST00000493758 ERFP50548 548 aa1.58□□□□□ -2.16
ITGB1-216ENST00000493758 IDI1Q13907 227 aa1.58□□□□□ -2.16
ITGB1-216ENST00000493758 CCL15Q16663 113 aa1.58□□□□□ -2.16
ITGB1-216ENST00000493758 PRAMEF20Q5VT98 475 aa1.58□□□□□ -2.16
ITGB1-216ENST00000493758 ZNF470Q6ECI4 717 aa1.58□□□□□ -2.16
ITGB1-216ENST00000493758 MORN3Q6PF18 240 aaPredicted RBP1.58□□□□□ -2.16
ITGB1-216ENST00000493758 C12orf54Q6X4T0 127 aa1.58□□□□□ -2.16
ITGB1-216ENST00000493758 ORMDL3Q8N138 153 aa1.58□□□□□ -2.16
ITGB1-216ENST00000493758 NRGNQ92686 78 aa1.58□□□□□ -2.16
ITGB1-216ENST00000493758 YIPF5Q969M3 257 aa1.58□□□□□ -2.16
ITGB1-216ENST00000493758 ANKRA2Q9H9E1 313 aa1.58□□□□□ -2.16
ITGB1-216ENST00000493758 ZNF160Q9HCG1 818 aa1.58□□□□□ -2.16
ITGB1-216ENST00000493758 ZNF257Q9Y2Q1 563 aa1.58□□□□□ -2.16
ITGB1-216ENST00000493758 MYO16Q9Y6X6 1858 aa1.58□□□□□ -2.16
ITGB1-216ENST00000493758 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP1.58□□□□□ -2.16
ITGB1-216ENST00000493758 ARPC4-TTLL3A0A0A6YYG9 625 aa1.57□□□□□ -2.16
ITGB1-216ENST00000493758 KBTBD11-OT1A0A1B0GTJ5 212 aa1.57□□□□□ -2.16
ITGB1-216ENST00000493758 D6RAR5 112 aa1.57□□□□□ -2.16
ITGB1-216ENST00000493758 SLC9A3R1O14745 358 aaPredicted RBP1.57□□□□□ -2.16
ITGB1-216ENST00000493758 PSPHP1O15172 72 aa1.57□□□□□ -2.16
ITGB1-216ENST00000493758 MAS1P04201 325 aa1.57□□□□□ -2.16
ITGB1-216ENST00000493758 STOMP27105 288 aa1.57□□□□□ -2.16
ITGB1-216ENST00000493758 HLA-DMAP28067 261 aa1.57□□□□□ -2.16
ITGB1-216ENST00000493758 WDR82Q6UXN9 313 aa1.57□□□□□ -2.16
ITGB1-216ENST00000493758 LY6G5BQ8NDX9 201 aa1.57□□□□□ -2.16
ITGB1-216ENST00000493758 DCAKDQ8WVC6 231 aa1.57□□□□□ -2.16
ITGB1-216ENST00000493758 CDS1Q92903 461 aa1.57□□□□□ -2.16
ITGB1-216ENST00000493758 RERGQ96A58 199 aaPredicted RBP1.57□□□□□ -2.16
ITGB1-216ENST00000493758 S100PBPQ96BU1 408 aa1.57□□□□□ -2.16
ITGB1-216ENST00000493758 SMARCD1Q96GM5 515 aa1.57□□□□□ -2.16
ITGB1-216ENST00000493758 KLF6Q99612 283 aaPredicted RBP1.57□□□□□ -2.16
ITGB1-216ENST00000493758 GPR21Q99679 349 aa1.57□□□□□ -2.16
ITGB1-216ENST00000493758 CALN1Q9BXU9 219 aa1.57□□□□□ -2.16
ITGB1-216ENST00000493758 UCK2Q9BZX2 261 aa1.57□□□□□ -2.16
ITGB1-216ENST00000493758 PIGUQ9H490 435 aa1.57□□□□□ -2.16
ITGB1-216ENST00000493758 ZNF302Q9NR11 478 aa1.57□□□□□ -2.16
ITGB1-216ENST00000493758 DYRK4Q9NR20 520 aa1.57□□□□□ -2.16
ITGB1-216ENST00000493758 TREX1Q9NSU2 369 aa1.57□□□□□ -2.16
ITGB1-216ENST00000493758 FARSAQ9Y285 508 aaKnown RBP1.57□□□□□ -2.16
ITGB1-216ENST00000493758 A0A0A6YYD5 115 aa1.56□□□□□ -2.16
ITGB1-216ENST00000493758 TSPAN11A1L157 253 aa1.56□□□□□ -2.16
ITGB1-216ENST00000493758 OR2AG2A6NM03 316 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms