RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 PSMB9P28065 219 aa10.45□□□□□ -0.74
UPF3A-210ENST00000493727 CDKN1AP38936 164 aa10.45□□□□□ -0.74
UPF3A-210ENST00000493727 SLC6A9P48067 706 aa10.45□□□□□ -0.74
UPF3A-210ENST00000493727 CX3CR1P49238 355 aa10.45□□□□□ -0.74
UPF3A-210ENST00000493727 ZNF83P51522 516 aa10.45□□□□□ -0.74
UPF3A-210ENST00000493727 PRKXP51817 358 aa10.45□□□□□ -0.74
UPF3A-210ENST00000493727 ROM1Q03395 351 aa10.45□□□□□ -0.74
UPF3A-210ENST00000493727 EMX1Q04741 257 aaPredicted RBP10.45□□□□□ -0.74
UPF3A-210ENST00000493727 MRPL28Q13084 256 aaKnown RBP10.45□□□□□ -0.74
UPF3A-210ENST00000493727 TBC1D28Q2M2D7 210 aa10.45□□□□□ -0.74
UPF3A-210ENST00000493727 DEGS2Q6QHC5 323 aa10.45□□□□□ -0.74
UPF3A-210ENST00000493727 KLBQ86Z14 1044 aa10.45□□□□□ -0.74
UPF3A-210ENST00000493727 SLC30A7Q8NEW0 376 aa10.45□□□□□ -0.74
UPF3A-210ENST00000493727 OR1J2Q8NGS2 313 aa10.45□□□□□ -0.74
UPF3A-210ENST00000493727 NEUROG1Q92886 237 aa10.45□□□□□ -0.74
UPF3A-210ENST00000493727 NIPAL2Q9H841 368 aa10.45□□□□□ -0.74
UPF3A-210ENST00000493727 ISG20L2Q9H9L3 353 aaKnown RBP10.45□□□□□ -0.74
UPF3A-210ENST00000493727 CDH20Q9HBT6 801 aa10.45□□□□□ -0.74
UPF3A-210ENST00000493727 ACOT13Q9NPJ3 140 aa10.45□□□□□ -0.74
UPF3A-210ENST00000493727 TRIM36Q9NQ86 728 aa10.45□□□□□ -0.74
UPF3A-210ENST00000493727 DDX28Q9NUL7 540 aaKnown RBP10.45□□□□□ -0.74
UPF3A-210ENST00000493727 ATPIF1Q9UII2 106 aa10.45□□□□□ -0.74
UPF3A-210ENST00000493727 N6AMT1Q9Y5N5 214 aa10.45□□□□□ -0.74
UPF3A-210ENST00000493727 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.45□□□□□ -0.74
UPF3A-210ENST00000493727 C5orf49A4QMS7 147 aa10.44□□□□□ -0.74
UPF3A-210ENST00000493727 ANKRD34BA5PLL1 514 aa10.44□□□□□ -0.74
UPF3A-210ENST00000493727 LOC110117498-PIK3R3F6TDL0 507 aa10.44□□□□□ -0.74
UPF3A-210ENST00000493727 M0R135 149 aa10.44□□□□□ -0.74
UPF3A-210ENST00000493727 ABCD4O14678 606 aa10.44□□□□□ -0.74
UPF3A-210ENST00000493727 SYNGR3O43761 229 aa10.44□□□□□ -0.74
UPF3A-210ENST00000493727 CLPTM1O96005 669 aa10.44□□□□□ -0.74
UPF3A-210ENST00000493727 SERPINA5P05154 406 aa10.44□□□□□ -0.74
UPF3A-210ENST00000493727 ANXA2P07355 339 aaKnown RBP10.44□□□□□ -0.74
UPF3A-210ENST00000493727 CELA3BP08861 270 aa10.44□□□□□ -0.74
UPF3A-210ENST00000493727 COX5BP10606 129 aa10.44□□□□□ -0.74
UPF3A-210ENST00000493727 STOMP27105 288 aa10.44□□□□□ -0.74
UPF3A-210ENST00000493727 PSMB10P40306 273 aa10.44□□□□□ -0.74
UPF3A-210ENST00000493727 TPTEP56180 551 aa10.44□□□□□ -0.74
UPF3A-210ENST00000493727 DSCR9P59020 149 aa10.44□□□□□ -0.74
UPF3A-210ENST00000493727 TAS2R43P59537 309 aa10.44□□□□□ -0.74
UPF3A-210ENST00000493727 SPHARQ15513 63 aa10.44□□□□□ -0.74
UPF3A-210ENST00000493727 C3orf36Q3SXR2 165 aa10.44□□□□□ -0.74
UPF3A-210ENST00000493727 LIPNQ5VXI9 398 aa10.44□□□□□ -0.74
UPF3A-210ENST00000493727 RHOUQ7L0Q8 258 aa10.44□□□□□ -0.74
UPF3A-210ENST00000493727 MAPK1IP1LQ8NDC0 245 aa10.44□□□□□ -0.74
UPF3A-210ENST00000493727 HAVCR2Q8TDQ0 301 aa10.44□□□□□ -0.74
UPF3A-210ENST00000493727 SLC7A6Q92536 515 aa10.44□□□□□ -0.74
UPF3A-210ENST00000493727 FAM168AQ92567 244 aa10.44□□□□□ -0.74
UPF3A-210ENST00000493727 ZNF799Q96GE5 643 aa10.44□□□□□ -0.74
UPF3A-210ENST00000493727 KIRREL1Q96J84 757 aa10.44□□□□□ -0.74
UPF3A-210ENST00000493727 OR5M11Q96RB7 305 aa10.44□□□□□ -0.74
UPF3A-210ENST00000493727 KCNJ15Q99712 375 aa10.44□□□□□ -0.74
UPF3A-210ENST00000493727 KCNS3Q9BQ31 491 aa10.44□□□□□ -0.74
UPF3A-210ENST00000493727 ZNF649Q9BS31 505 aa10.44□□□□□ -0.74
UPF3A-210ENST00000493727 BABAM2Q9NXR7 383 aa10.44□□□□□ -0.74
UPF3A-210ENST00000493727 POU2F3Q9UKI9 436 aa10.44□□□□□ -0.74
UPF3A-210ENST00000493727 R4GMQ9 66 aa10.44□□□□□ -0.74
UPF3A-210ENST00000493727 ARFGEF3Q5TH69 2177 aa10.43□□□□□ -0.74
UPF3A-210ENST00000493727 PNMA8CA0A1B0GUJ8 204 aa10.43□□□□□ -0.74
UPF3A-210ENST00000493727 CD5LO43866 347 aa10.43□□□□□ -0.74
UPF3A-210ENST00000493727 ABHD16AO95870 558 aa10.43□□□□□ -0.74
UPF3A-210ENST00000493727 IGKV3-15P01624 115 aa10.43□□□□□ -0.74
UPF3A-210ENST00000493727 CD8AP01732 235 aa10.43□□□□□ -0.74
UPF3A-210ENST00000493727 IGHV4-39P01824 125 aa10.43□□□□□ -0.74
UPF3A-210ENST00000493727 DBHP09172 617 aa10.43□□□□□ -0.74
UPF3A-210ENST00000493727 CCL2P13500 99 aa10.43□□□□□ -0.74
UPF3A-210ENST00000493727 ZNF14P17017 642 aaPredicted RBP10.43□□□□□ -0.74
UPF3A-210ENST00000493727 PCMT1P22061 227 aa10.43□□□□□ -0.74
UPF3A-210ENST00000493727 TIGD6Q17RP2 521 aa10.43□□□□□ -0.74
UPF3A-210ENST00000493727 ZNF684Q5T5D7 378 aa10.43□□□□□ -0.74
UPF3A-210ENST00000493727 ARL9Q6T311 187 aa10.43□□□□□ -0.74
UPF3A-210ENST00000493727 SLC22A25Q6T423 547 aa10.43□□□□□ -0.74
UPF3A-210ENST00000493727 DNM1P46Q6ZS02 220 aa10.43□□□□□ -0.74
UPF3A-210ENST00000493727 EGFL6Q8IUX8 553 aa10.43□□□□□ -0.74
UPF3A-210ENST00000493727 FBXL14Q8N1E6 418 aa10.43□□□□□ -0.74
UPF3A-210ENST00000493727 CPEB3Q8NE35 698 aaKnown RBP10.43□□□□□ -0.74
UPF3A-210ENST00000493727 UFD1Q92890 307 aa10.43□□□□□ -0.74
UPF3A-210ENST00000493727 PELI1Q96FA3 418 aa10.43□□□□□ -0.74
UPF3A-210ENST00000493727 PGAM5Q96HS1 289 aa10.43□□□□□ -0.74
UPF3A-210ENST00000493727 DOK1Q99704 481 aa10.43□□□□□ -0.74
UPF3A-210ENST00000493727 DHRS9Q9BPW9 319 aa10.43□□□□□ -0.74
UPF3A-210ENST00000493727 MOB1AQ9H8S9 216 aa10.43□□□□□ -0.74
UPF3A-210ENST00000493727 SP140LQ9H930 580 aa10.43□□□□□ -0.74
UPF3A-210ENST00000493727 CBLN4Q9NTU7 201 aa10.43□□□□□ -0.74
UPF3A-210ENST00000493727 NPAP1Q9NZP6 1156 aa10.43□□□□□ -0.74
UPF3A-210ENST00000493727 EIF3KQ9UBQ5 218 aaKnown RBP10.43□□□□□ -0.74
UPF3A-210ENST00000493727 LSM2Q9Y333 95 aaKnown RBP10.43□□□□□ -0.74
UPF3A-210ENST00000493727 SF3B6Q9Y3B4 125 aaKnown RBP10.43□□□□□ -0.74
UPF3A-210ENST00000493727 GRIP1Q9Y3R0 1128 aa10.43□□□□□ -0.74
UPF3A-210ENST00000493727 IGHV1-18A0A0C4DH31 117 aa10.42□□□□□ -0.74
UPF3A-210ENST00000493727 TMEM269A0A1B0GVZ9 245 aa10.42□□□□□ -0.74
UPF3A-210ENST00000493727 NOTOA8MTQ0 251 aa10.42□□□□□ -0.74
UPF3A-210ENST00000493727 TBX1O43435 398 aa10.42□□□□□ -0.74
UPF3A-210ENST00000493727 INMTO95050 263 aa10.42□□□□□ -0.74
UPF3A-210ENST00000493727 IFNA2P01563 188 aa10.42□□□□□ -0.74
UPF3A-210ENST00000493727 LCATP04180 440 aa10.42□□□□□ -0.74
UPF3A-210ENST00000493727 CECR9P0C854 216 aa10.42□□□□□ -0.74
UPF3A-210ENST00000493727 SLC2A1P11166 492 aa10.42□□□□□ -0.74
UPF3A-210ENST00000493727 RAC2P15153 192 aa10.42□□□□□ -0.74
UPF3A-210ENST00000493727 CD40P25942 277 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms