RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 RGS18Q9NS28 235 aa1.83□□□□□ -2.12
SMC4-223ENST00000493695 TREX1Q9NSU2 369 aa1.83□□□□□ -2.12
SMC4-223ENST00000493695 RHBDL2Q9NX52 303 aa1.83□□□□□ -2.12
SMC4-223ENST00000493695 MYEF2Q9P2K5 600 aaKnown RBP1.83□□□□□ -2.12
SMC4-223ENST00000493695 TSPOAP1O95153 1857 aa1.83□□□□□ -2.12
SMC4-223ENST00000493695 PHLPP2Q6ZVD8 1323 aa1.83□□□□□ -2.12
SMC4-223ENST00000493695 IGHV3-49A0A0A0MS15 119 aa1.82□□□□□ -2.12
SMC4-223ENST00000493695 LRRIQ4A6NIV6 560 aa1.82□□□□□ -2.12
SMC4-223ENST00000493695 NDUFC2-KCTD14E9PQ53 114 aa1.82□□□□□ -2.12
SMC4-223ENST00000493695 LGALS9O00182 355 aa1.82□□□□□ -2.12
SMC4-223ENST00000493695 LHBP01229 141 aa1.82□□□□□ -2.12
SMC4-223ENST00000493695 IGLV2-8P01709 118 aa1.82□□□□□ -2.12
SMC4-223ENST00000493695 UBCP0CG48 685 aaKnown RBP1.82□□□□□ -2.12
SMC4-223ENST00000493695 RAB5AP20339 215 aa1.82□□□□□ -2.12
SMC4-223ENST00000493695 TALDO1P37837 337 aa1.82□□□□□ -2.12
SMC4-223ENST00000493695 SLC1A2P43004 574 aa1.82□□□□□ -2.12
SMC4-223ENST00000493695 OR2B8PP59922 312 aa1.82□□□□□ -2.12
SMC4-223ENST00000493695 ZNF33AQ06730 810 aa1.82□□□□□ -2.12
SMC4-223ENST00000493695 SLC39A6Q13433 755 aa1.82□□□□□ -2.12
SMC4-223ENST00000493695 SLC25A35Q3KQZ1 300 aa1.82□□□□□ -2.12
SMC4-223ENST00000493695 YIF1BQ5BJH7 314 aa1.82□□□□□ -2.12
SMC4-223ENST00000493695 RWDD4Q6NW29 188 aaKnown RBP1.82□□□□□ -2.12
SMC4-223ENST00000493695 RTL4Q6ZR62 310 aa1.82□□□□□ -2.12
SMC4-223ENST00000493695 APCDD1LQ8NCL9 501 aa1.82□□□□□ -2.12
SMC4-223ENST00000493695 OR5T1Q8NG75 326 aa1.82□□□□□ -2.12
SMC4-223ENST00000493695 OR1J4Q8NGS1 313 aa1.82□□□□□ -2.12
SMC4-223ENST00000493695 OR1L1Q8NH94 360 aa1.82□□□□□ -2.12
SMC4-223ENST00000493695 ITFG1Q8TB96 612 aa1.82□□□□□ -2.12
SMC4-223ENST00000493695 KLF14Q8TD94 323 aaPredicted RBP1.82□□□□□ -2.12
SMC4-223ENST00000493695 IP6K3Q96PC2 410 aa1.82□□□□□ -2.12
SMC4-223ENST00000493695 UQCC2Q9BRT2 126 aa1.82□□□□□ -2.12
SMC4-223ENST00000493695 PIGUQ9H490 435 aa1.82□□□□□ -2.12
SMC4-223ENST00000493695 C21orf62Q9NYP8 219 aa1.82□□□□□ -2.12
SMC4-223ENST00000493695 YARS2Q9Y2Z4 477 aaKnown RBP1.82□□□□□ -2.12
SMC4-223ENST00000493695 UBIAD1Q9Y5Z9 338 aa1.82□□□□□ -2.12
SMC4-223ENST00000493695 ANKRD12Q6UB98 2062 aa1.82□□□□□ -2.12
SMC4-223ENST00000493695 IGHV1-3A0A0C4DH29 117 aa1.81□□□□□ -2.12
SMC4-223ENST00000493695 ZNF99A8MXY4 864 aaPredicted RBP1.81□□□□□ -2.12
SMC4-223ENST00000493695 PLIN3O60664 434 aa1.81□□□□□ -2.12
SMC4-223ENST00000493695 CTNSO60931 367 aa1.81□□□□□ -2.12
SMC4-223ENST00000493695 SERPINB7O75635 380 aa1.81□□□□□ -2.12
SMC4-223ENST00000493695 TDP2O95551 362 aa1.81□□□□□ -2.12
SMC4-223ENST00000493695 CYB5R3P00387 301 aaPredicted RBP1.81□□□□□ -2.12
SMC4-223ENST00000493695 MT-ND4P03905 459 aa1.81□□□□□ -2.12
SMC4-223ENST00000493695 ASGR1P07306 291 aa1.81□□□□□ -2.12
SMC4-223ENST00000493695 MYL9P24844 172 aa1.81□□□□□ -2.12
SMC4-223ENST00000493695 PSMB5P28074 263 aa1.81□□□□□ -2.12
SMC4-223ENST00000493695 PCK1P35558 622 aa1.81□□□□□ -2.12
SMC4-223ENST00000493695 TAS2R39P59534 338 aa1.81□□□□□ -2.12
SMC4-223ENST00000493695 KDSRQ06136 332 aa1.81□□□□□ -2.12
SMC4-223ENST00000493695 SPAG1Q07617 926 aa1.81□□□□□ -2.12
SMC4-223ENST00000493695 CYP24A1Q07973 514 aa1.81□□□□□ -2.12
SMC4-223ENST00000493695 PIGHQ14442 188 aaPredicted RBP1.81□□□□□ -2.12
SMC4-223ENST00000493695 CD300LGQ6UXG3 332 aa1.81□□□□□ -2.12
SMC4-223ENST00000493695 LRRC75AQ8NAA5 344 aa1.81□□□□□ -2.12
SMC4-223ENST00000493695 RAB1CQ92928 201 aa1.81□□□□□ -2.12
SMC4-223ENST00000493695 DEFB129Q9H1M3 183 aa1.81□□□□□ -2.12
SMC4-223ENST00000493695 PRSS16Q9NQE7 514 aa1.81□□□□□ -2.12
SMC4-223ENST00000493695 FBXO6Q9NRD1 293 aaPredicted RBP1.81□□□□□ -2.12
SMC4-223ENST00000493695 AHSPQ9NZD4 102 aa1.81□□□□□ -2.12
SMC4-223ENST00000493695 ADGRA3Q8IWK6 1321 aa1.81□□□□□ -2.12
SMC4-223ENST00000493695 A0A0A6YYD5 115 aa1.8□□□□□ -2.12
SMC4-223ENST00000493695 C16orf90A8MZG2 172 aa1.8□□□□□ -2.12
SMC4-223ENST00000493695 H0YIV9 168 aa1.8□□□□□ -2.12
SMC4-223ENST00000493695 GOLGA8TH3BQL2 631 aa1.8□□□□□ -2.12
SMC4-223ENST00000493695 XRCC2O43543 280 aa1.8□□□□□ -2.12
SMC4-223ENST00000493695 CHMP2AO43633 222 aa1.8□□□□□ -2.12
SMC4-223ENST00000493695 TRBV12-3P01733 135 aa1.8□□□□□ -2.12
SMC4-223ENST00000493695 TPM2P07951 284 aa1.8□□□□□ -2.12
SMC4-223ENST00000493695 GFAPP14136 432 aa1.8□□□□□ -2.12
SMC4-223ENST00000493695 UBE2E1P51965 193 aa1.8□□□□□ -2.12
SMC4-223ENST00000493695 CLDN8P56748 225 aa1.8□□□□□ -2.12
SMC4-223ENST00000493695 TAS2R46P59540 309 aa1.8□□□□□ -2.12
SMC4-223ENST00000493695 LINC00336Q6ZUF6 198 aa1.8□□□□□ -2.12
SMC4-223ENST00000493695 DRAM1Q8N682 238 aa1.8□□□□□ -2.12
SMC4-223ENST00000493695 ZNF645Q8N7E2 425 aa1.8□□□□□ -2.12
SMC4-223ENST00000493695 UBAC2Q8NBM4 344 aa1.8□□□□□ -2.12
SMC4-223ENST00000493695 RXFP4Q8TDU9 374 aa1.8□□□□□ -2.12
SMC4-223ENST00000493695 SMARCD1Q96GM5 515 aa1.8□□□□□ -2.12
SMC4-223ENST00000493695 OR4K3Q96R72 315 aa1.8□□□□□ -2.12
SMC4-223ENST00000493695 A0A0B4J2E0 115 aa1.79□□□□□ -2.12
SMC4-223ENST00000493695 TMEM120BA0PK00 339 aa1.79□□□□□ -2.12
SMC4-223ENST00000493695 BTNL10A8MVZ5 291 aa1.79□□□□□ -2.12
SMC4-223ENST00000493695 NTF3P20783 257 aa1.79□□□□□ -2.12
SMC4-223ENST00000493695 CD82P27701 267 aa1.79□□□□□ -2.12
SMC4-223ENST00000493695 IFITM3Q01628 133 aa1.79□□□□□ -2.12
SMC4-223ENST00000493695 FUT5Q11128 374 aa1.79□□□□□ -2.12
SMC4-223ENST00000493695 TFDP2Q14188 446 aa1.79□□□□□ -2.12
SMC4-223ENST00000493695 C5orf64Q2M2E5 130 aa1.79□□□□□ -2.12
SMC4-223ENST00000493695 ERO1BQ86YB8 467 aa1.79□□□□□ -2.12
SMC4-223ENST00000493695 LRRC52Q8N7C0 313 aa1.79□□□□□ -2.12
SMC4-223ENST00000493695 ENKURQ8TC29 256 aa1.79□□□□□ -2.12
SMC4-223ENST00000493695 GPX8Q8TED1 209 aa1.79□□□□□ -2.12
SMC4-223ENST00000493695 GHSRQ92847 366 aa1.79□□□□□ -2.12
SMC4-223ENST00000493695 NAT6Q93015 286 aa1.79□□□□□ -2.12
SMC4-223ENST00000493695 CPNE4Q96A23 557 aaPredicted RBP1.79□□□□□ -2.12
SMC4-223ENST00000493695 DYNLL2Q96FJ2 89 aa1.79□□□□□ -2.12
SMC4-223ENST00000493695 ZFP3Q96NJ6 502 aa1.79□□□□□ -2.12
SMC4-223ENST00000493695 KCNS3Q9BQ31 491 aa1.79□□□□□ -2.12
SMC4-223ENST00000493695 EMC6Q9BV81 110 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms