RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 SUMF2Q8NBJ7 301 aa10.4□□□□□ -0.74
HDAC4-210ENST00000493582 OR14K1Q8NGZ2 314 aa10.4□□□□□ -0.74
HDAC4-210ENST00000493582 PTX4Q96A99 478 aa10.4□□□□□ -0.74
HDAC4-210ENST00000493582 FGGYQ96C11 551 aa10.4□□□□□ -0.74
HDAC4-210ENST00000493582 SLC25A36Q96CQ1 311 aa10.4□□□□□ -0.74
HDAC4-210ENST00000493582 MVB12AQ96EY5 273 aa10.4□□□□□ -0.74
HDAC4-210ENST00000493582 NELFAQ9H3P2 528 aa10.4□□□□□ -0.74
HDAC4-210ENST00000493582 LUZP4Q9P127 313 aa10.4□□□□□ -0.74
HDAC4-210ENST00000493582 RCL1Q9Y2P8 373 aaKnown RBP10.4□□□□□ -0.74
HDAC4-210ENST00000493582 A0A1W2PQ45 241 aaPredicted RBP10.4□□□□□ -0.74
HDAC4-210ENST00000493582 A0A1W2PQY0 241 aa10.4□□□□□ -0.74
HDAC4-210ENST00000493582 SERINC4A6NH21 518 aa10.4□□□□□ -0.74
HDAC4-210ENST00000493582 P2RY10O00398 339 aa10.4□□□□□ -0.74
HDAC4-210ENST00000493582 CYR61O00622 381 aa10.4□□□□□ -0.74
HDAC4-210ENST00000493582 GAPDHP04406 335 aaKnown RBP10.4□□□□□ -0.74
HDAC4-210ENST00000493582 HEXBP07686 556 aa10.4□□□□□ -0.74
HDAC4-210ENST00000493582 ATXN8OSP0DMR3 200 aa10.4□□□□□ -0.74
HDAC4-210ENST00000493582 IL2RGP31785 369 aa10.4□□□□□ -0.74
HDAC4-210ENST00000493582 ZNHIT3Q15649 155 aaPredicted RBP10.4□□□□□ -0.74
HDAC4-210ENST00000493582 HNRNPA1L2Q32P51 320 aaKnown RBP10.4□□□□□ -0.74
HDAC4-210ENST00000493582 RAB39BQ96DA2 213 aa10.4□□□□□ -0.74
HDAC4-210ENST00000493582 WDR92Q96MX6 357 aa10.4□□□□□ -0.74
HDAC4-210ENST00000493582 DUSP15Q9H1R2 295 aaPredicted RBP10.4□□□□□ -0.74
HDAC4-210ENST00000493582 ZNF724A8MTY0 619 aa10.4□□□□□ -0.75
HDAC4-210ENST00000493582 CLDN4O14493 209 aa10.4□□□□□ -0.75
HDAC4-210ENST00000493582 ZNF217O75362 1048 aa10.4□□□□□ -0.75
HDAC4-210ENST00000493582 APBB3O95704 486 aa10.4□□□□□ -0.75
HDAC4-210ENST00000493582 ADH1CP00326 375 aa10.4□□□□□ -0.75
HDAC4-210ENST00000493582 NR2C1P13056 603 aa10.4□□□□□ -0.75
HDAC4-210ENST00000493582 KLK2P20151 261 aa10.4□□□□□ -0.75
HDAC4-210ENST00000493582 CHATP28329 748 aa10.4□□□□□ -0.75
HDAC4-210ENST00000493582 SLC35A1P78382 337 aa10.4□□□□□ -0.75
HDAC4-210ENST00000493582 HSD11B2P80365 405 aa10.4□□□□□ -0.75
HDAC4-210ENST00000493582 ELAVL3Q14576 367 aaKnown RBP10.4□□□□□ -0.75
HDAC4-210ENST00000493582 ZNF141Q15928 474 aa10.4□□□□□ -0.75
HDAC4-210ENST00000493582 PCK2Q16822 640 aa10.4□□□□□ -0.75
HDAC4-210ENST00000493582 NPSR1Q6W5P4 371 aa10.4□□□□□ -0.75
HDAC4-210ENST00000493582 COMMD1Q8N668 190 aa10.4□□□□□ -0.75
HDAC4-210ENST00000493582 HSD17B11Q8NBQ5 300 aa10.4□□□□□ -0.75
HDAC4-210ENST00000493582 ZNF558Q96NG5 402 aa10.4□□□□□ -0.75
HDAC4-210ENST00000493582 PRRX2Q99811 253 aa10.4□□□□□ -0.75
HDAC4-210ENST00000493582 MRPL37Q9BZE1 423 aaKnown RBP10.4□□□□□ -0.75
HDAC4-210ENST00000493582 OR11A1Q9GZK7 315 aa10.4□□□□□ -0.75
HDAC4-210ENST00000493582 WFDC1Q9HC57 220 aa10.4□□□□□ -0.75
HDAC4-210ENST00000493582 PILRAQ9UKJ1 303 aa10.4□□□□□ -0.75
HDAC4-210ENST00000493582 TP53TG5Q9Y2B4 290 aa10.4□□□□□ -0.75
HDAC4-210ENST00000493582 SLCO1B1Q9Y6L6 691 aa10.4□□□□□ -0.75
HDAC4-210ENST00000493582 H3BQ15 152 aa10.39□□□□□ -0.75
HDAC4-210ENST00000493582 SOCS1O15524 211 aa10.39□□□□□ -0.75
HDAC4-210ENST00000493582 SLC2A1P11166 492 aa10.39□□□□□ -0.75
HDAC4-210ENST00000493582 RNF4P78317 190 aa10.39□□□□□ -0.75
HDAC4-210ENST00000493582 RELQ04864 619 aaPredicted RBP10.39□□□□□ -0.75
HDAC4-210ENST00000493582 HAGHQ16775 308 aa10.39□□□□□ -0.75
HDAC4-210ENST00000493582 C1QL3Q5VWW1 255 aa10.39□□□□□ -0.75
HDAC4-210ENST00000493582 OPN5Q6U736 354 aa10.39□□□□□ -0.75
HDAC4-210ENST00000493582 KDM8Q8N371 416 aa10.39□□□□□ -0.75
HDAC4-210ENST00000493582 TMEM156Q8N614 296 aa10.39□□□□□ -0.75
HDAC4-210ENST00000493582 NT5CQ8TCD5 201 aa10.39□□□□□ -0.75
HDAC4-210ENST00000493582 ABHD5Q8WTS1 349 aa10.39□□□□□ -0.75
HDAC4-210ENST00000493582 TAAR8Q969N4 342 aa10.39□□□□□ -0.75
HDAC4-210ENST00000493582 C8orf44Q96CB5 159 aa10.39□□□□□ -0.75
HDAC4-210ENST00000493582 PACRGQ96M98 296 aaPredicted RBP10.39□□□□□ -0.75
HDAC4-210ENST00000493582 ST6GALNAC5Q9BVH7 336 aa10.39□□□□□ -0.75
HDAC4-210ENST00000493582 STARD5Q9NSY2 213 aa10.39□□□□□ -0.75
HDAC4-210ENST00000493582 RFNGQ9Y644 331 aa10.39□□□□□ -0.75
HDAC4-210ENST00000493582 CDH23Q9H251 3354 aa10.39□□□□□ -0.75
HDAC4-210ENST00000493582 HSPB2A8KAH6 182 aa10.39□□□□□ -0.75
HDAC4-210ENST00000493582 H0YL77 283 aa10.39□□□□□ -0.75
HDAC4-210ENST00000493582 EML2O95834 649 aa10.39□□□□□ -0.75
HDAC4-210ENST00000493582 TRGC1P0CF51 173 aa10.39□□□□□ -0.75
HDAC4-210ENST00000493582 RPS2P15880 293 aaKnown RBP10.39□□□□□ -0.75
HDAC4-210ENST00000493582 TBPP20226 339 aa10.39□□□□□ -0.75
HDAC4-210ENST00000493582 RABIFP47224 123 aa10.39□□□□□ -0.75
HDAC4-210ENST00000493582 EMP2P54851 167 aa10.39□□□□□ -0.75
HDAC4-210ENST00000493582 CCL20P78556 96 aa10.39□□□□□ -0.75
HDAC4-210ENST00000493582 QRFPP83859 136 aa10.39□□□□□ -0.75
HDAC4-210ENST00000493582 PDGFRLQ15198 375 aa10.39□□□□□ -0.75
HDAC4-210ENST00000493582 HSPB2Q16082 182 aa10.39□□□□□ -0.75
HDAC4-210ENST00000493582 PLAC9Q5JTB6 97 aa10.39□□□□□ -0.75
HDAC4-210ENST00000493582 AKR1C8PQ5T2L2 129 aa10.39□□□□□ -0.75
HDAC4-210ENST00000493582 PLPP4Q5VZY2 271 aa10.39□□□□□ -0.75
HDAC4-210ENST00000493582 KCTD18Q6PI47 426 aaPredicted RBP10.39□□□□□ -0.75
HDAC4-210ENST00000493582 OR13G1Q8NGZ3 307 aa10.39□□□□□ -0.75
HDAC4-210ENST00000493582 FRZBQ92765 325 aa10.39□□□□□ -0.75
HDAC4-210ENST00000493582 PBDC1Q9BVG4 233 aa10.39□□□□□ -0.75
HDAC4-210ENST00000493582 MEMO1Q9Y316 297 aa10.39□□□□□ -0.75
HDAC4-210ENST00000493582 A8MWP6 167 aa10.38□□□□□ -0.75
HDAC4-210ENST00000493582 RPL36A-HNRNPH2H7BZ11 118 aa10.38□□□□□ -0.75
HDAC4-210ENST00000493582 XKRYO14609 159 aa10.38□□□□□ -0.75
HDAC4-210ENST00000493582 FOXS1O43638 330 aa10.38□□□□□ -0.75
HDAC4-210ENST00000493582 CYTIPO60759 359 aa10.38□□□□□ -0.75
HDAC4-210ENST00000493582 DEDDO75618 318 aa10.38□□□□□ -0.75
HDAC4-210ENST00000493582 FCARP24071 287 aa10.38□□□□□ -0.75
HDAC4-210ENST00000493582 CTNNB1P35222 781 aa10.38□□□□□ -0.75
HDAC4-210ENST00000493582 UBE2KP61086 200 aa10.38□□□□□ -0.75
HDAC4-210ENST00000493582 CD226Q15762 336 aa10.38□□□□□ -0.75
HDAC4-210ENST00000493582 AADACL3Q5VUY0 350 aa10.38□□□□□ -0.75
HDAC4-210ENST00000493582 ATG4DQ86TL0 474 aaPredicted RBP10.38□□□□□ -0.75
HDAC4-210ENST00000493582 NAXEQ8NCW5 288 aa10.38□□□□□ -0.75
HDAC4-210ENST00000493582 FAM213BQ8TBF2 198 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms