RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 OR10AC1Q8NH08 325 aa14.72□□□□□ -0.05
LIME1-208ENST00000493265 GHSRQ92847 366 aa14.72□□□□□ -0.05
LIME1-208ENST00000493265 UFD1Q92890 307 aa14.72□□□□□ -0.05
LIME1-208ENST00000493265 SPSB4Q96A44 273 aa14.72□□□□□ -0.05
LIME1-208ENST00000493265 HAVCR1Q96D42 359 aa14.72□□□□□ -0.05
LIME1-208ENST00000493265 SMIM19Q96E16 107 aa14.72□□□□□ -0.05
LIME1-208ENST00000493265 OPALINQ96PE5 141 aa14.72□□□□□ -0.05
LIME1-208ENST00000493265 REPIN1Q9BWE0 567 aaKnown RBP14.72□□□□□ -0.05
LIME1-208ENST00000493265 RGCCQ9H4X1 137 aa14.72□□□□□ -0.05
LIME1-208ENST00000493265 VCX3AQ9NNX9 186 aa14.72□□□□□ -0.05
LIME1-208ENST00000493265 TUBG2Q9NRH3 451 aa14.72□□□□□ -0.05
LIME1-208ENST00000493265 PURGQ9UJV8 347 aaKnown RBP14.72□□□□□ -0.05
LIME1-208ENST00000493265 A0A1B0GTI1 187 aa14.71□□□□□ -0.05
LIME1-208ENST00000493265 hCG_38984A0A1B0GV85 526 aa14.71□□□□□ -0.05
LIME1-208ENST00000493265 A6NIN4 97 aa14.71□□□□□ -0.05
LIME1-208ENST00000493265 LMX1BO60663 402 aa14.71□□□□□ -0.05
LIME1-208ENST00000493265 SMIM18P0DKX4 95 aa14.71□□□□□ -0.05
LIME1-208ENST00000493265 ALDH3B1P43353 468 aa14.71□□□□□ -0.05
LIME1-208ENST00000493265 ACSM1Q08AH1 577 aa14.71□□□□□ -0.05
LIME1-208ENST00000493265 MLLT11Q13015 90 aaPredicted RBP14.71□□□□□ -0.05
LIME1-208ENST00000493265 DOK3Q7L591 496 aa14.71□□□□□ -0.05
LIME1-208ENST00000493265 OR13C5Q8NGS8 318 aa14.71□□□□□ -0.05
LIME1-208ENST00000493265 TSEN15Q8WW01 171 aaKnown RBP14.71□□□□□ -0.05
LIME1-208ENST00000493265 FCGR1BQ92637 280 aa14.71□□□□□ -0.05
LIME1-208ENST00000493265 GTF3AQ92664 365 aaKnown RBP14.71□□□□□ -0.05
LIME1-208ENST00000493265 TMED9Q9BVK6 235 aa14.71□□□□□ -0.05
LIME1-208ENST00000493265 OPA3Q9H6K4 179 aa14.71□□□□□ -0.05
LIME1-208ENST00000493265 PLEKHF2Q9H8W4 249 aa14.71□□□□□ -0.05
LIME1-208ENST00000493265 FAIMQ9NVQ4 179 aa14.71□□□□□ -0.05
LIME1-208ENST00000493265 LAMP3Q9UQV4 416 aa14.71□□□□□ -0.05
LIME1-208ENST00000493265 CD300LBA8K4G0 201 aa14.7□□□□□ -0.06
LIME1-208ENST00000493265 H3BSA7 217 aa14.7□□□□□ -0.06
LIME1-208ENST00000493265 LILRA1O75019 489 aa14.7□□□□□ -0.06
LIME1-208ENST00000493265 SOD3P08294 240 aa14.7□□□□□ -0.06
LIME1-208ENST00000493265 SELEP16581 610 aa14.7□□□□□ -0.06
LIME1-208ENST00000493265 ACHEP22303 614 aa14.7□□□□□ -0.06
LIME1-208ENST00000493265 ACKR3P25106 362 aa14.7□□□□□ -0.06
LIME1-208ENST00000493265 MAGEB1P43366 347 aa14.7□□□□□ -0.06
LIME1-208ENST00000493265 SOX2P48431 317 aa14.7□□□□□ -0.06
LIME1-208ENST00000493265 BDH1Q02338 343 aa14.7□□□□□ -0.06
LIME1-208ENST00000493265 AGAP6Q5VW22 663 aa14.7□□□□□ -0.06
LIME1-208ENST00000493265 ZNF611Q8N823 705 aa14.7□□□□□ -0.06
LIME1-208ENST00000493265 OR51A4Q8NGJ6 313 aa14.7□□□□□ -0.06
LIME1-208ENST00000493265 OR13C3Q8NGS6 347 aa14.7□□□□□ -0.06
LIME1-208ENST00000493265 RGP1Q92546 391 aaPredicted RBP14.7□□□□□ -0.06
LIME1-208ENST00000493265 TMEM203Q969S6 136 aa14.7□□□□□ -0.06
LIME1-208ENST00000493265 MRPS26Q9BYN8 205 aaKnown RBP14.7□□□□□ -0.06
LIME1-208ENST00000493265 MSL2Q9HCI7 577 aa14.7□□□□□ -0.06
LIME1-208ENST00000493265 DYNLRB1Q9NP97 96 aa14.7□□□□□ -0.06
LIME1-208ENST00000493265 ISYNA1Q9NPH2 558 aa14.7□□□□□ -0.06
LIME1-208ENST00000493265 ZNF391Q9UJN7 358 aa14.7□□□□□ -0.06
LIME1-208ENST00000493265 HHLA2Q9UM44 414 aa14.7□□□□□ -0.06
LIME1-208ENST00000493265 PIGLQ9Y2B2 252 aa14.7□□□□□ -0.06
LIME1-208ENST00000493265 ZNF281Q9Y2X9 895 aa14.7□□□□□ -0.06
LIME1-208ENST00000493265 HRNRQ86YZ3 2850 aaPredicted RBP14.7□□□□□ -0.06
LIME1-208ENST00000493265 AKAP6Q13023 2319 aa14.69□□□□□ -0.06
LIME1-208ENST00000493265 PLSCR5A0PG75 271 aa14.69□□□□□ -0.06
LIME1-208ENST00000493265 B9A039 149 aa14.69□□□□□ -0.06
LIME1-208ENST00000493265 PLPP2O43688 288 aa14.69□□□□□ -0.06
LIME1-208ENST00000493265 MTRF1O75570 445 aaKnown RBP14.69□□□□□ -0.06
LIME1-208ENST00000493265 IGLV3-1P01715 115 aa14.69□□□□□ -0.06
LIME1-208ENST00000493265 IGHV3-13P01766 116 aa14.69□□□□□ -0.06
LIME1-208ENST00000493265 CD99P14209 185 aa14.69□□□□□ -0.06
LIME1-208ENST00000493265 FAHP16930 419 aa14.69□□□□□ -0.06
LIME1-208ENST00000493265 KITLGP21583 273 aa14.69□□□□□ -0.06
LIME1-208ENST00000493265 MAP2K3P46734 347 aa14.69□□□□□ -0.06
LIME1-208ENST00000493265 TNK1Q13470 666 aa14.69□□□□□ -0.06
LIME1-208ENST00000493265 SEMA6DQ8NFY4 1073 aa14.69□□□□□ -0.06
LIME1-208ENST00000493265 RPS4Y2Q8TD47 263 aa14.69□□□□□ -0.06
LIME1-208ENST00000493265 LIME1Q9H400 295 aa14.69□□□□□ -0.06
LIME1-208ENST00000493265 PLEKHA1Q9HB21 404 aa14.69□□□□□ -0.06
LIME1-208ENST00000493265 ZNF469Q96JG9 3925 aaPredicted RBP14.69□□□□□ -0.06
LIME1-208ENST00000493265 NAV3Q8IVL0 2385 aa14.69□□□□□ -0.06
LIME1-208ENST00000493265 PRRC2AP48634 2157 aaKnown RBP14.68□□□□□ -0.06
LIME1-208ENST00000493265 IGLV3-9A0A075B6K5 115 aa14.68□□□□□ -0.06
LIME1-208ENST00000493265 DHRS3O75911 302 aa14.68□□□□□ -0.06
LIME1-208ENST00000493265 ISG15P05161 165 aa14.68□□□□□ -0.06
LIME1-208ENST00000493265 NAT2P11245 290 aa14.68□□□□□ -0.06
LIME1-208ENST00000493265 CPEP16870 476 aa14.68□□□□□ -0.06
LIME1-208ENST00000493265 ZNF20P17024 532 aa14.68□□□□□ -0.06
LIME1-208ENST00000493265 GP2P55259 537 aaKnown RBP14.68□□□□□ -0.06
LIME1-208ENST00000493265 SNRPD2P62316 118 aaKnown RBP14.68□□□□□ -0.06
LIME1-208ENST00000493265 RPS25P62851 125 aaKnown RBP14.68□□□□□ -0.06
LIME1-208ENST00000493265 RIPPLY1Q0D2K3 151 aa14.68□□□□□ -0.06
LIME1-208ENST00000493265 TPBGQ13641 420 aa14.68□□□□□ -0.06
LIME1-208ENST00000493265 EFNB3Q15768 340 aa14.68□□□□□ -0.06
LIME1-208ENST00000493265 MST1LQ2TV78 715 aa14.68□□□□□ -0.06
LIME1-208ENST00000493265 ZCCHC24Q8N2G6 241 aaKnown RBP14.68□□□□□ -0.06
LIME1-208ENST00000493265 OR14K1Q8NGZ2 314 aa14.68□□□□□ -0.06
LIME1-208ENST00000493265 GPR148Q8TDV2 347 aa14.68□□□□□ -0.06
LIME1-208ENST00000493265 DVL3Q92997 716 aaPredicted RBP14.68□□□□□ -0.06
LIME1-208ENST00000493265 MUL1Q969V5 352 aa14.68□□□□□ -0.06
LIME1-208ENST00000493265 FGGYQ96C11 551 aa14.68□□□□□ -0.06
LIME1-208ENST00000493265 PGLYRP3Q96LB9 341 aa14.68□□□□□ -0.06
LIME1-208ENST00000493265 TMUB1Q9BVT8 246 aa14.68□□□□□ -0.06
LIME1-208ENST00000493265 CBLN4Q9NTU7 201 aa14.68□□□□□ -0.06
LIME1-208ENST00000493265 DHDHQ9UQ10 334 aa14.68□□□□□ -0.06
LIME1-208ENST00000493265 RHBDD3Q9Y3P4 386 aa14.68□□□□□ -0.06
LIME1-208ENST00000493265 V9GYS6 101 aa14.68□□□□□ -0.06
LIME1-208ENST00000493265 MAP1AP78559 2803 aaPredicted RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms