RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 LCATP04180 440 aa12.25□□□□□ -0.45
PTPN7-216ENST00000492977 TCRBP04435 133 aa12.25□□□□□ -0.45
PTPN7-216ENST00000492977 HCKP08631 526 aa12.25□□□□□ -0.45
PTPN7-216ENST00000492977 COX5BP10606 129 aa12.25□□□□□ -0.45
PTPN7-216ENST00000492977 GIFP27352 417 aa12.25□□□□□ -0.45
PTPN7-216ENST00000492977 AGTR1P30556 359 aa12.25□□□□□ -0.45
PTPN7-216ENST00000492977 RAG2P55895 527 aa12.25□□□□□ -0.45
PTPN7-216ENST00000492977 PMPCAQ10713 525 aa12.25□□□□□ -0.45
PTPN7-216ENST00000492977 PABPC1L2AQ5JQF8 200 aa12.25□□□□□ -0.45
PTPN7-216ENST00000492977 SFRP5Q5T4F7 317 aa12.25□□□□□ -0.45
PTPN7-216ENST00000492977 OLFML2AQ68BL7 652 aa12.25□□□□□ -0.45
PTPN7-216ENST00000492977 OR2W3Q7Z3T1 314 aa12.25□□□□□ -0.45
PTPN7-216ENST00000492977 SEMA6DQ8NFY4 1073 aa12.25□□□□□ -0.45
PTPN7-216ENST00000492977 REEP6Q96HR9 211 aa12.25□□□□□ -0.45
PTPN7-216ENST00000492977 GMPPAQ96IJ6 420 aaPredicted RBP12.25□□□□□ -0.45
PTPN7-216ENST00000492977 CHST5Q9GZS9 411 aa12.25□□□□□ -0.45
PTPN7-216ENST00000492977 SCPEP1Q9HB40 452 aa12.25□□□□□ -0.45
PTPN7-216ENST00000492977 PIGLQ9Y2B2 252 aa12.25□□□□□ -0.45
PTPN7-216ENST00000492977 IGKV1-9A0A0C4DH69 117 aa12.24□□□□□ -0.45
PTPN7-216ENST00000492977 DHFRP00374 187 aa12.24□□□□□ -0.45
PTPN7-216ENST00000492977 MT-ND4P03905 459 aa12.24□□□□□ -0.45
PTPN7-216ENST00000492977 UBBP0CG47 229 aa12.24□□□□□ -0.45
PTPN7-216ENST00000492977 VSIG8P0DPA2 414 aa12.24□□□□□ -0.45
PTPN7-216ENST00000492977 PTHLHP12272 177 aa12.24□□□□□ -0.45
PTPN7-216ENST00000492977 ARR3P36575 388 aa12.24□□□□□ -0.45
PTPN7-216ENST00000492977 EIF2B2P49770 351 aaKnown RBP12.24□□□□□ -0.45
PTPN7-216ENST00000492977 GSK3AP49840 483 aa12.24□□□□□ -0.45
PTPN7-216ENST00000492977 HGFACQ04756 655 aa12.24□□□□□ -0.45
PTPN7-216ENST00000492977 FAPQ12884 760 aa12.24□□□□□ -0.45
PTPN7-216ENST00000492977 FAM189A2Q15884 450 aa12.24□□□□□ -0.45
PTPN7-216ENST00000492977 AWAT2Q6E213 333 aa12.24□□□□□ -0.45
PTPN7-216ENST00000492977 BTN2A1Q7KYR7 527 aa12.24□□□□□ -0.45
PTPN7-216ENST00000492977 FGD2Q7Z6J4 655 aa12.24□□□□□ -0.45
PTPN7-216ENST00000492977 DPPA2Q7Z7J5 298 aa12.24□□□□□ -0.45
PTPN7-216ENST00000492977 PAQR4Q8N4S7 273 aaPredicted RBP12.24□□□□□ -0.45
PTPN7-216ENST00000492977 PNLDC1Q8NA58 520 aaKnown RBP12.24□□□□□ -0.45
PTPN7-216ENST00000492977 UBASH3BQ8TF42 649 aa12.24□□□□□ -0.45
PTPN7-216ENST00000492977 FAM46BQ96A09 425 aa12.24□□□□□ -0.45
PTPN7-216ENST00000492977 NUDT16L1Q9BRJ7 211 aaKnown RBP12.24□□□□□ -0.45
PTPN7-216ENST00000492977 ACTR6Q9GZN1 396 aa12.24□□□□□ -0.45
PTPN7-216ENST00000492977 ZNF224Q9NZL3 707 aa12.24□□□□□ -0.45
PTPN7-216ENST00000492977 MRPS28Q9Y2Q9 187 aaKnown RBP12.24□□□□□ -0.45
PTPN7-216ENST00000492977 ALG5Q9Y673 324 aa12.24□□□□□ -0.45
PTPN7-216ENST00000492977 RTTNQ86VV8 2226 aa12.24□□□□□ -0.45
PTPN7-216ENST00000492977 FREM1Q5H8C1 2179 aa12.23□□□□□ -0.45
PTPN7-216ENST00000492977 FAM186AA6NE01 2351 aa12.23□□□□□ -0.45
PTPN7-216ENST00000492977 TMEM14DPA8MWL7 114 aa12.23□□□□□ -0.45
PTPN7-216ENST00000492977 KLK10O43240 276 aa12.23□□□□□ -0.45
PTPN7-216ENST00000492977 CSF1P09603 554 aa12.23□□□□□ -0.45
PTPN7-216ENST00000492977 FAHP16930 419 aa12.23□□□□□ -0.45
PTPN7-216ENST00000492977 FAUP35544 74 aaKnown RBP12.23□□□□□ -0.45
PTPN7-216ENST00000492977 RIPPLY1Q0D2K3 151 aa12.23□□□□□ -0.45
PTPN7-216ENST00000492977 UNC119Q13432 240 aa12.23□□□□□ -0.45
PTPN7-216ENST00000492977 ZNF169Q14929 603 aaPredicted RBP12.23□□□□□ -0.45
PTPN7-216ENST00000492977 FBXW9Q5XUX1 488 aa12.23□□□□□ -0.45
PTPN7-216ENST00000492977 OR10K2Q6IF99 312 aa12.23□□□□□ -0.45
PTPN7-216ENST00000492977 P4HA3Q7Z4N8 544 aa12.23□□□□□ -0.45
PTPN7-216ENST00000492977 CDH24Q86UP0 819 aa12.23□□□□□ -0.45
PTPN7-216ENST00000492977 OR6F1Q8NGZ6 308 aa12.23□□□□□ -0.45
PTPN7-216ENST00000492977 KCNG3Q8TAE7 436 aa12.23□□□□□ -0.45
PTPN7-216ENST00000492977 GPX8Q8TED1 209 aa12.23□□□□□ -0.45
PTPN7-216ENST00000492977 SARAFQ96BY9 339 aa12.23□□□□□ -0.45
PTPN7-216ENST00000492977 C1QTNF5Q9BXJ0 243 aa12.23□□□□□ -0.45
PTPN7-216ENST00000492977 NUDT15Q9NV35 164 aa12.23□□□□□ -0.45
PTPN7-216ENST00000492977 MRPL15Q9P015 296 aaKnown RBP12.23□□□□□ -0.45
PTPN7-216ENST00000492977 CLCF1Q9UBD9 225 aa12.23□□□□□ -0.45
PTPN7-216ENST00000492977 GHRLQ9UBU3 117 aa12.23□□□□□ -0.45
PTPN7-216ENST00000492977 A0A096LPE4 126 aa12.22□□□□□ -0.45
PTPN7-216ENST00000492977 A0A1W2PPZ6 126 aa12.22□□□□□ -0.45
PTPN7-216ENST00000492977 XRCC2O43543 280 aa12.22□□□□□ -0.45
PTPN7-216ENST00000492977 SS18L1O75177 396 aaPredicted RBP12.22□□□□□ -0.45
PTPN7-216ENST00000492977 LPLP06858 475 aa12.22□□□□□ -0.45
PTPN7-216ENST00000492977 MPGP29372 298 aa12.22□□□□□ -0.45
PTPN7-216ENST00000492977 ALDH3B1P43353 468 aa12.22□□□□□ -0.45
PTPN7-216ENST00000492977 OR3A2P47893 321 aa12.22□□□□□ -0.45
PTPN7-216ENST00000492977 CCR6P51684 374 aa12.22□□□□□ -0.45
PTPN7-216ENST00000492977 FOXG1P55316 489 aaPredicted RBP12.22□□□□□ -0.45
PTPN7-216ENST00000492977 ACTBP60709 375 aa12.22□□□□□ -0.45
PTPN7-216ENST00000492977 ACTG1P63261 375 aa12.22□□□□□ -0.45
PTPN7-216ENST00000492977 KISS1Q15726 138 aa12.22□□□□□ -0.45
PTPN7-216ENST00000492977 UBE2V2Q15819 145 aa12.22□□□□□ -0.45
PTPN7-216ENST00000492977 C9orf135Q5VTT2 229 aa12.22□□□□□ -0.45
PTPN7-216ENST00000492977 TMEM53Q6P2H8 277 aa12.22□□□□□ -0.45
PTPN7-216ENST00000492977 GLIPR1L1Q6UWM5 242 aa12.22□□□□□ -0.45
PTPN7-216ENST00000492977 COLCA1Q6ZS62 124 aa12.22□□□□□ -0.45
PTPN7-216ENST00000492977 ZNF101Q8IZC7 436 aa12.22□□□□□ -0.45
PTPN7-216ENST00000492977 CPEB3Q8NE35 698 aaKnown RBP12.22□□□□□ -0.45
PTPN7-216ENST00000492977 AKAP1Q92667 903 aaKnown RBP eCLIP12.22□□□□□ -0.45
PTPN7-216ENST00000492977 SPACA5Q96QH8 159 aa12.22□□□□□ -0.45
PTPN7-216ENST00000492977 GPER1Q99527 375 aa12.22□□□□□ -0.45
PTPN7-216ENST00000492977 NEK6Q9HC98 313 aa12.22□□□□□ -0.45
PTPN7-216ENST00000492977 MYEF2Q9P2K5 600 aaKnown RBP12.22□□□□□ -0.45
PTPN7-216ENST00000492977 GVINP1Q7Z2Y8 2422 aa12.22□□□□□ -0.45
PTPN7-216ENST00000492977 ARHGAP21Q5T5U3 1957 aa12.22□□□□□ -0.45
PTPN7-216ENST00000492977 RAB27BO00194 218 aa12.22□□□□□ -0.45
PTPN7-216ENST00000492977 GMDSO60547 372 aa12.22□□□□□ -0.45
PTPN7-216ENST00000492977 CHRM2P08172 466 aa12.22□□□□□ -0.45
PTPN7-216ENST00000492977 PSMB1P20618 241 aaKnown RBP12.22□□□□□ -0.45
PTPN7-216ENST00000492977 OR3A4PP47883 348 aa12.22□□□□□ -0.45
PTPN7-216ENST00000492977 PCGF3Q3KNV8 242 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms