RNA–Protein interactions for RNA: ENST00000492539.5

NELFE-212, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-212ENST00000492539 F5H5K5 113 aa16.52■□□□□ 0.24
NELFE-212ENST00000492539 NDUFA7O95182 113 aa16.52■□□□□ 0.24
NELFE-212ENST00000492539 KNG1P01042 644 aa16.52■□□□□ 0.24
NELFE-212ENST00000492539 IFNGP01579 166 aa16.52■□□□□ 0.24
NELFE-212ENST00000492539 MMP9P14780 707 aa16.52■□□□□ 0.24
NELFE-212ENST00000492539 CFHR2P36980 270 aa16.52■□□□□ 0.24
NELFE-212ENST00000492539 RAG2P55895 527 aa16.52■□□□□ 0.24
NELFE-212ENST00000492539 CDK5Q00535 292 aa16.52■□□□□ 0.24
NELFE-212ENST00000492539 SRSF4Q08170 494 aaKnown RBP16.52■□□□□ 0.24
NELFE-212ENST00000492539 ECH1Q13011 328 aa16.52■□□□□ 0.24
NELFE-212ENST00000492539 GINS1Q14691 196 aa16.52■□□□□ 0.24
NELFE-212ENST00000492539 MPPED2Q15777 294 aa16.52■□□□□ 0.24
NELFE-212ENST00000492539 MIDNQ504T8 468 aa16.52■□□□□ 0.24
NELFE-212ENST00000492539 RUSC1-AS1Q66K80 236 aa16.52■□□□□ 0.24
NELFE-212ENST00000492539 FIP1L1Q6UN15 594 aaKnown RBP16.52■□□□□ 0.24
NELFE-212ENST00000492539 NAA40Q86UY6 237 aa16.52■□□□□ 0.24
NELFE-212ENST00000492539 LINC00346Q8IVM7 164 aa16.52■□□□□ 0.24
NELFE-212ENST00000492539 KIR3DL3Q8N743 410 aa16.52■□□□□ 0.24
NELFE-212ENST00000492539 OR4F5Q8NH21 305 aa16.52■□□□□ 0.24
NELFE-212ENST00000492539 ATF6BQ99941 703 aa16.52■□□□□ 0.24
NELFE-212ENST00000492539 FN3KQ9H479 309 aa16.52■□□□□ 0.24
NELFE-212ENST00000492539 MARCH7Q9H992 704 aa16.52■□□□□ 0.24
NELFE-212ENST00000492539 SLC25A19Q9HC21 320 aa16.52■□□□□ 0.24
NELFE-212ENST00000492539 SRA1Q9HD15 236 aaKnown RBP16.52■□□□□ 0.24
NELFE-212ENST00000492539 CMC2Q9NRP2 79 aa16.52■□□□□ 0.24
NELFE-212ENST00000492539 NOTCH1P46531 2555 aa16.52■□□□□ 0.23
NELFE-212ENST00000492539 SAC3D1A6NKF1 404 aa16.51■□□□□ 0.23
NELFE-212ENST00000492539 RIIAD1A6NNX1 92 aa16.51■□□□□ 0.23
NELFE-212ENST00000492539 ZNF879B4DU55 563 aa16.51■□□□□ 0.23
NELFE-212ENST00000492539 P2RY10O00398 339 aa16.51■□□□□ 0.23
NELFE-212ENST00000492539 TNFRSF13BO14836 293 aaPredicted RBP16.51■□□□□ 0.23
NELFE-212ENST00000492539 PTBP3O95758 552 aaKnown RBP16.51■□□□□ 0.23
NELFE-212ENST00000492539 MELTFP08582 738 aa16.51■□□□□ 0.23
NELFE-212ENST00000492539 ZNF3P17036 446 aa16.51■□□□□ 0.23
NELFE-212ENST00000492539 CRISP1P54107 249 aa16.51■□□□□ 0.23
NELFE-212ENST00000492539 ESRRGP62508 458 aa16.51■□□□□ 0.23
NELFE-212ENST00000492539 HOXA4Q00056 320 aaPredicted RBP16.51■□□□□ 0.23
NELFE-212ENST00000492539 DBPQ10586 325 aaPredicted RBP16.51■□□□□ 0.23
NELFE-212ENST00000492539 CRMP1Q14194 572 aa16.51■□□□□ 0.23
NELFE-212ENST00000492539 OLFML2AQ68BL7 652 aa16.51■□□□□ 0.23
NELFE-212ENST00000492539 PGAP1Q75T13 922 aa16.51■□□□□ 0.23
NELFE-212ENST00000492539 CYB561A3Q8NBI2 242 aa16.51■□□□□ 0.23
NELFE-212ENST00000492539 STMN2Q93045 179 aa16.51■□□□□ 0.23
NELFE-212ENST00000492539 FAM71F1Q96KD3 344 aaPredicted RBP16.51■□□□□ 0.23
NELFE-212ENST00000492539 TBX15Q96SF7 602 aa16.51■□□□□ 0.23
NELFE-212ENST00000492539 PITX2Q99697 317 aa16.51■□□□□ 0.23
NELFE-212ENST00000492539 CITED1Q99966 193 aa16.51■□□□□ 0.23
NELFE-212ENST00000492539 PCGF1Q9BSM1 259 aa16.51■□□□□ 0.23
NELFE-212ENST00000492539 CHIAQ9BZP6 476 aa16.51■□□□□ 0.23
NELFE-212ENST00000492539 UFSP2Q9NUQ7 469 aa16.51■□□□□ 0.23
NELFE-212ENST00000492539 CYB5R1Q9UHQ9 305 aa16.51■□□□□ 0.23
NELFE-212ENST00000492539 ENOPH1Q9UHY7 261 aa16.51■□□□□ 0.23
NELFE-212ENST00000492539 MITFO75030 526 aaPredicted RBP16.5■□□□□ 0.23
NELFE-212ENST00000492539 LCATP04180 440 aa16.5■□□□□ 0.23
NELFE-212ENST00000492539 HMGN1P05114 100 aa16.5■□□□□ 0.23
NELFE-212ENST00000492539 SFTPBP07988 381 aa16.5■□□□□ 0.23
NELFE-212ENST00000492539 GGT2P36268 569 aa16.5■□□□□ 0.23
NELFE-212ENST00000492539 SLC25A1P53007 311 aa16.5■□□□□ 0.23
NELFE-212ENST00000492539 MALLQ13021 153 aa16.5■□□□□ 0.23
NELFE-212ENST00000492539 CD276Q5ZPR3 534 aa16.5■□□□□ 0.23
NELFE-212ENST00000492539 C17orf107Q6ZR85 190 aa16.5■□□□□ 0.23
NELFE-212ENST00000492539 PQLC1Q8N2U9 271 aa16.5■□□□□ 0.23
NELFE-212ENST00000492539 OR2T4Q8NH00 348 aa16.5■□□□□ 0.23
NELFE-212ENST00000492539 TECTBQ96PL2 329 aa16.5■□□□□ 0.23
NELFE-212ENST00000492539 RBM4BQ9BQ04 359 aaKnown RBP16.5■□□□□ 0.23
NELFE-212ENST00000492539 TEX12Q9BXU0 123 aa16.5■□□□□ 0.23
NELFE-212ENST00000492539 NMNAT2Q9BZQ4 307 aa16.5■□□□□ 0.23
NELFE-212ENST00000492539 TNFRSF19Q9NS68 423 aa16.5■□□□□ 0.23
NELFE-212ENST00000492539 ERVK-18Q9QC07 812 aa16.5■□□□□ 0.23
NELFE-212ENST00000492539 RNF7Q9UBF6 113 aa16.5■□□□□ 0.23
NELFE-212ENST00000492539 POMT1Q9Y6A1 747 aa16.5■□□□□ 0.23
NELFE-212ENST00000492539 CENPVL3A0A0U1RRI6 287 aa16.49■□□□□ 0.23
NELFE-212ENST00000492539 ANKRD65E5RJM6 399 aa16.49■□□□□ 0.23
NELFE-212ENST00000492539 LGALS8O00214 317 aa16.49■□□□□ 0.23
NELFE-212ENST00000492539 CRYBA1P05813 215 aa16.49■□□□□ 0.23
NELFE-212ENST00000492539 LIPFP07098 398 aa16.49■□□□□ 0.23
NELFE-212ENST00000492539 RPL15P61313 204 aaKnown RBP16.49■□□□□ 0.23
NELFE-212ENST00000492539 KCNJ8Q15842 424 aa16.49■□□□□ 0.23
NELFE-212ENST00000492539 SPRYD4Q8WW59 207 aaPredicted RBP16.49■□□□□ 0.23
NELFE-212ENST00000492539 SLC22A4Q9H015 551 aa16.49■□□□□ 0.23
NELFE-212ENST00000492539 FN3KRPQ9HA64 309 aa16.49■□□□□ 0.23
NELFE-212ENST00000492539 NOP16Q9Y3C1 178 aaKnown RBP16.49■□□□□ 0.23
NELFE-212ENST00000492539 CLPSL1A2RUU4 121 aa16.48■□□□□ 0.23
NELFE-212ENST00000492539 ERICH4A6NGS2 130 aa16.48■□□□□ 0.23
NELFE-212ENST00000492539 TOX4O94842 621 aa16.48■□□□□ 0.23
NELFE-212ENST00000492539 CA6P23280 308 aa16.48■□□□□ 0.23
NELFE-212ENST00000492539 TPTEP56180 551 aa16.48■□□□□ 0.23
NELFE-212ENST00000492539 PTGES3Q15185 160 aaKnown RBP16.48■□□□□ 0.23
NELFE-212ENST00000492539 OR8G1Q15617 311 aa16.48■□□□□ 0.23
NELFE-212ENST00000492539 TMEM236Q5W0B7 351 aa16.48■□□□□ 0.23
NELFE-212ENST00000492539 RHOUQ7L0Q8 258 aa16.48■□□□□ 0.23
NELFE-212ENST00000492539 MRPL21Q7Z2W9 205 aaKnown RBP16.48■□□□□ 0.23
NELFE-212ENST00000492539 PLPP7Q8NBV4 271 aa16.48■□□□□ 0.23
NELFE-212ENST00000492539 PROKR2Q8NFJ6 384 aa16.48■□□□□ 0.23
NELFE-212ENST00000492539 OR9Q1Q8NGQ5 310 aa16.48■□□□□ 0.23
NELFE-212ENST00000492539 OR2AJ1Q8NGZ0 328 aa16.48■□□□□ 0.23
NELFE-212ENST00000492539 MAP6Q96JE9 813 aa16.48■□□□□ 0.23
NELFE-212ENST00000492539 CIB1Q99828 191 aa16.48■□□□□ 0.23
NELFE-212ENST00000492539 ADAT1Q9BUB4 502 aaKnown RBP16.48■□□□□ 0.23
NELFE-212ENST00000492539 MRPL22Q9NWU5 206 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms