RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 YAP1P46937 504 aaKnown RBP7.64□□□□□ -1.19
HDAC3-212ENST00000492407 SMIM11AP58511 58 aa7.64□□□□□ -1.19
HDAC3-212ENST00000492407 RPL15P61313 204 aaKnown RBP7.64□□□□□ -1.19
HDAC3-212ENST00000492407 SEC61A1P61619 476 aaKnown RBP7.64□□□□□ -1.19
HDAC3-212ENST00000492407 LCN6P62502 163 aa7.64□□□□□ -1.19
HDAC3-212ENST00000492407 GNB2P62879 340 aa7.64□□□□□ -1.19
HDAC3-212ENST00000492407 LIPEQ05469 1076 aa7.64□□□□□ -1.19
HDAC3-212ENST00000492407 ODF1Q14990 250 aa7.64□□□□□ -1.19
HDAC3-212ENST00000492407 KCNJ8Q15842 424 aa7.64□□□□□ -1.19
HDAC3-212ENST00000492407 KRTAP27-1Q3LI81 207 aa7.64□□□□□ -1.19
HDAC3-212ENST00000492407 SLC36A3Q495N2 470 aa7.64□□□□□ -1.19
HDAC3-212ENST00000492407 SPATS1Q496A3 300 aa7.64□□□□□ -1.19
HDAC3-212ENST00000492407 HES5Q5TA89 166 aa7.64□□□□□ -1.19
HDAC3-212ENST00000492407 CD276Q5ZPR3 534 aa7.64□□□□□ -1.19
HDAC3-212ENST00000492407 C8orf82Q6P1X6 216 aaPredicted RBP7.64□□□□□ -1.19
HDAC3-212ENST00000492407 TBPL2Q6SJ96 375 aa7.64□□□□□ -1.19
HDAC3-212ENST00000492407 ELMOD2Q8IZ81 293 aa7.64□□□□□ -1.19
HDAC3-212ENST00000492407 PARP8Q8N3A8 854 aa7.64□□□□□ -1.19
HDAC3-212ENST00000492407 TMEM86BQ8N661 226 aa7.64□□□□□ -1.19
HDAC3-212ENST00000492407 MINDY2Q8NBR6 621 aa7.64□□□□□ -1.19
HDAC3-212ENST00000492407 OR8B3Q8NGG8 313 aa7.64□□□□□ -1.19
HDAC3-212ENST00000492407 HSH2DQ96JZ2 352 aa7.64□□□□□ -1.19
HDAC3-212ENST00000492407 ZNF48Q96MX3 618 aaPredicted RBP7.64□□□□□ -1.19
HDAC3-212ENST00000492407 OR8B2Q96RD0 313 aa7.64□□□□□ -1.19
HDAC3-212ENST00000492407 C1QTNF5Q9BXJ0 243 aa7.64□□□□□ -1.19
HDAC3-212ENST00000492407 NUAK2Q9H093 628 aa7.64□□□□□ -1.19
HDAC3-212ENST00000492407 SYT4Q9H2B2 425 aa7.64□□□□□ -1.19
HDAC3-212ENST00000492407 UNKLQ9H9P5 680 aaKnown RBP7.64□□□□□ -1.19
HDAC3-212ENST00000492407 EFCAB1Q9HAE3 211 aa7.64□□□□□ -1.19
HDAC3-212ENST00000492407 PLGRKTQ9HBL7 147 aa7.64□□□□□ -1.19
HDAC3-212ENST00000492407 TRIM36Q9NQ86 728 aa7.64□□□□□ -1.19
HDAC3-212ENST00000492407 COA3Q9Y2R0 106 aaPredicted RBP7.64□□□□□ -1.19
HDAC3-212ENST00000492407 SAMHD1Q9Y3Z3 626 aaKnown RBP7.64□□□□□ -1.19
HDAC3-212ENST00000492407 DYSFO75923 2080 aa7.63□□□□□ -1.19
HDAC3-212ENST00000492407 FAM172BPA6NC97 362 aa7.63□□□□□ -1.19
HDAC3-212ENST00000492407 RER1O15258 196 aa7.63□□□□□ -1.19
HDAC3-212ENST00000492407 CCDC22O60826 627 aa7.63□□□□□ -1.19
HDAC3-212ENST00000492407 FAM107AO95990 144 aa7.63□□□□□ -1.19
HDAC3-212ENST00000492407 SERPINA1P01009 418 aa7.63□□□□□ -1.19
HDAC3-212ENST00000492407 APOC1P02654 83 aa7.63□□□□□ -1.19
HDAC3-212ENST00000492407 H1F0P07305 194 aaKnown RBP7.63□□□□□ -1.19
HDAC3-212ENST00000492407 SNRNP70P08621 437 aaKnown RBP7.63□□□□□ -1.19
HDAC3-212ENST00000492407 IRF2P14316 349 aa7.63□□□□□ -1.19
HDAC3-212ENST00000492407 PTBP1P26599 531 aaKnown RBP eCLIP7.63□□□□□ -1.19
HDAC3-212ENST00000492407 NUP62P37198 522 aaPredicted RBP7.63□□□□□ -1.19
HDAC3-212ENST00000492407 CD200P41217 278 aa7.63□□□□□ -1.19
HDAC3-212ENST00000492407 GPR4P46093 362 aa7.63□□□□□ -1.19
HDAC3-212ENST00000492407 OMPP47874 163 aa7.63□□□□□ -1.19
HDAC3-212ENST00000492407 SLC7A2P52569 658 aa7.63□□□□□ -1.19
HDAC3-212ENST00000492407 MALLQ13021 153 aa7.63□□□□□ -1.19
HDAC3-212ENST00000492407 DNAL1Q4LDG9 190 aa7.63□□□□□ -1.19
HDAC3-212ENST00000492407 TM4SF20Q53R12 229 aa7.63□□□□□ -1.19
HDAC3-212ENST00000492407 OR2T2Q6IF00 324 aa7.63□□□□□ -1.19
HDAC3-212ENST00000492407 SMARCD3Q6STE5 483 aa7.63□□□□□ -1.19
HDAC3-212ENST00000492407 TREML4Q6UXN2 200 aa7.63□□□□□ -1.19
HDAC3-212ENST00000492407 DCDC5Q6ZRR9 648 aa7.63□□□□□ -1.19
HDAC3-212ENST00000492407 BCL6BQ8N143 479 aaPredicted RBP7.63□□□□□ -1.19
HDAC3-212ENST00000492407 ARHGAP24Q8N264 748 aa7.63□□□□□ -1.19
HDAC3-212ENST00000492407 POU5F2Q8N7G0 328 aa7.63□□□□□ -1.19
HDAC3-212ENST00000492407 OR11L1Q8NGX0 322 aa7.63□□□□□ -1.19
HDAC3-212ENST00000492407 RCN3Q96D15 328 aa7.63□□□□□ -1.19
HDAC3-212ENST00000492407 NSMCE2Q96MF7 247 aa7.63□□□□□ -1.19
HDAC3-212ENST00000492407 NEURL2Q9BR09 285 aa7.63□□□□□ -1.19
HDAC3-212ENST00000492407 TMEM246Q9BRR3 403 aa7.63□□□□□ -1.19
HDAC3-212ENST00000492407 OR51V1Q9H2C8 321 aa7.63□□□□□ -1.19
HDAC3-212ENST00000492407 CCDC134Q9H6E4 229 aa7.63□□□□□ -1.19
HDAC3-212ENST00000492407 SRA1Q9HD15 236 aaKnown RBP7.63□□□□□ -1.19
HDAC3-212ENST00000492407 FGFR1OP2Q9NVK5 253 aa7.63□□□□□ -1.19
HDAC3-212ENST00000492407 PTTG3PQ9NZH4 202 aa7.63□□□□□ -1.19
HDAC3-212ENST00000492407 CLN8Q9UBY8 286 aa7.63□□□□□ -1.19
HDAC3-212ENST00000492407 CYB5R1Q9UHQ9 305 aa7.63□□□□□ -1.19
HDAC3-212ENST00000492407 KCNG2Q9UJ96 466 aa7.63□□□□□ -1.19
HDAC3-212ENST00000492407 DIMT1Q9UNQ2 313 aaKnown RBP7.63□□□□□ -1.19
HDAC3-212ENST00000492407 AURKCQ9UQB9 309 aa7.63□□□□□ -1.19
HDAC3-212ENST00000492407 PCDHGB5Q9Y5G0 923 aa7.63□□□□□ -1.19
HDAC3-212ENST00000492407 IER3IP1Q9Y5U9 82 aa7.63□□□□□ -1.19
HDAC3-212ENST00000492407 TANC2Q9HCD6 1990 aa7.62□□□□□ -1.19
HDAC3-212ENST00000492407 IGLV1-36A0A0B4J1U3 117 aa7.62□□□□□ -1.19
HDAC3-212ENST00000492407 UNC119BA6NIH7 251 aa7.62□□□□□ -1.19
HDAC3-212ENST00000492407 ZNF98A6NK75 572 aa7.62□□□□□ -1.19
HDAC3-212ENST00000492407 SRRM5B3KS81 715 aa7.62□□□□□ -1.19
HDAC3-212ENST00000492407 P2RY10O00398 339 aa7.62□□□□□ -1.19
HDAC3-212ENST00000492407 MLNRO43193 412 aa7.62□□□□□ -1.19
HDAC3-212ENST00000492407 ENSAO43768 121 aaKnown RBP7.62□□□□□ -1.19
HDAC3-212ENST00000492407 GMDSO60547 372 aa7.62□□□□□ -1.19
HDAC3-212ENST00000492407 PPP1R3DO95685 299 aa7.62□□□□□ -1.19
HDAC3-212ENST00000492407 COX4I1P13073 169 aa7.62□□□□□ -1.19
HDAC3-212ENST00000492407 FPR3P25089 353 aa7.62□□□□□ -1.19
HDAC3-212ENST00000492407 PSMB10P40306 273 aa7.62□□□□□ -1.19
HDAC3-212ENST00000492407 MDH1P40925 334 aaKnown RBP7.62□□□□□ -1.19
HDAC3-212ENST00000492407 CDKN2AP42771 156 aaKnown RBP7.62□□□□□ -1.19
HDAC3-212ENST00000492407 PITPNBP48739 271 aa7.62□□□□□ -1.19
HDAC3-212ENST00000492407 EIF2B2P49770 351 aaKnown RBP7.62□□□□□ -1.19
HDAC3-212ENST00000492407 ERFP50548 548 aa7.62□□□□□ -1.19
HDAC3-212ENST00000492407 GNGT1P63211 74 aa7.62□□□□□ -1.19
HDAC3-212ENST00000492407 RPP30P78346 268 aaKnown RBP7.62□□□□□ -1.19
HDAC3-212ENST00000492407 MZT1Q08AG7 82 aa7.62□□□□□ -1.19
HDAC3-212ENST00000492407 HLXQ14774 488 aaPredicted RBP7.62□□□□□ -1.19
HDAC3-212ENST00000492407 RSPO1Q2MKA7 263 aaPredicted RBP7.62□□□□□ -1.19
HDAC3-212ENST00000492407 RFX4Q33E94 735 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms