RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 HMGN1P05114 100 aa7.28□□□□□ -1.24
NUP50-217ENST00000491860 ANXA2P07355 339 aaKnown RBP7.28□□□□□ -1.24
NUP50-217ENST00000491860 GSTT1P30711 240 aa7.28□□□□□ -1.24
NUP50-217ENST00000491860 CFHR2P36980 270 aa7.28□□□□□ -1.24
NUP50-217ENST00000491860 CX3CR1P49238 355 aa7.28□□□□□ -1.24
NUP50-217ENST00000491860 PRKXP51817 358 aa7.28□□□□□ -1.24
NUP50-217ENST00000491860 FGF12P61328 243 aa7.28□□□□□ -1.24
NUP50-217ENST00000491860 IL5RAQ01344 420 aa7.28□□□□□ -1.24
NUP50-217ENST00000491860 CRMP1Q14194 572 aa7.28□□□□□ -1.24
NUP50-217ENST00000491860 EIF2B1Q14232 305 aaKnown RBP7.28□□□□□ -1.24
NUP50-217ENST00000491860 MPPED2Q15777 294 aa7.28□□□□□ -1.24
NUP50-217ENST00000491860 PRAMEF6Q5VXH4 476 aa7.28□□□□□ -1.24
NUP50-217ENST00000491860 TEX36Q5VZQ5 186 aa7.28□□□□□ -1.24
NUP50-217ENST00000491860 CYP2R1Q6VVX0 501 aa7.28□□□□□ -1.24
NUP50-217ENST00000491860 NAA40Q86UY6 237 aa7.28□□□□□ -1.24
NUP50-217ENST00000491860 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.28□□□□□ -1.24
NUP50-217ENST00000491860 CMTM4Q8IZR5 234 aa7.28□□□□□ -1.24
NUP50-217ENST00000491860 BCL6BQ8N143 479 aaPredicted RBP7.28□□□□□ -1.24
NUP50-217ENST00000491860 PAPD5Q8NDF8 572 aaKnown RBP7.28□□□□□ -1.24
NUP50-217ENST00000491860 OR56B2PQ8NGI1 322 aa7.28□□□□□ -1.24
NUP50-217ENST00000491860 OR4F5Q8NH21 305 aa7.28□□□□□ -1.24
NUP50-217ENST00000491860 OR2AE1Q8NHA4 323 aa7.28□□□□□ -1.24
NUP50-217ENST00000491860 TBC1D15Q8TC07 691 aa7.28□□□□□ -1.24
NUP50-217ENST00000491860 NPRL2Q8WTW4 380 aa7.28□□□□□ -1.24
NUP50-217ENST00000491860 SSMEM1Q8WWF3 244 aa7.28□□□□□ -1.24
NUP50-217ENST00000491860 ASB9Q96DX5 294 aa7.28□□□□□ -1.24
NUP50-217ENST00000491860 REEP6Q96HR9 211 aa7.28□□□□□ -1.24
NUP50-217ENST00000491860 NSL1Q96IY1 281 aa7.28□□□□□ -1.24
NUP50-217ENST00000491860 ZNF48Q96MX3 618 aaPredicted RBP7.28□□□□□ -1.24
NUP50-217ENST00000491860 MICU1Q9BPX6 476 aa7.28□□□□□ -1.24
NUP50-217ENST00000491860 DNTTIP1Q9H147 329 aa7.28□□□□□ -1.24
NUP50-217ENST00000491860 C1orf21Q9H246 121 aa7.28□□□□□ -1.24
NUP50-217ENST00000491860 YY1AP1Q9H869 796 aa7.28□□□□□ -1.24
NUP50-217ENST00000491860 UNKLQ9H9P5 680 aaKnown RBP7.28□□□□□ -1.24
NUP50-217ENST00000491860 ZNF556Q9HAH1 456 aa7.28□□□□□ -1.24
NUP50-217ENST00000491860 BEX1Q9HBH7 125 aa7.28□□□□□ -1.24
NUP50-217ENST00000491860 MPC1Q9Y5U8 109 aa7.28□□□□□ -1.24
NUP50-217ENST00000491860 KPTNQ9Y664 436 aa7.28□□□□□ -1.24
NUP50-217ENST00000491860 IGHV3-64DA0A0J9YX35 117 aa7.27□□□□□ -1.25
NUP50-217ENST00000491860 A0A1B0GVI7 797 aa7.27□□□□□ -1.25
NUP50-217ENST00000491860 TCRBV5S2A0A599 114 aa7.27□□□□□ -1.25
NUP50-217ENST00000491860 TMEM210A6NLX4 147 aa7.27□□□□□ -1.25
NUP50-217ENST00000491860 C3orf80F5H4A9 247 aa7.27□□□□□ -1.25
NUP50-217ENST00000491860 H3BN98 237 aa7.27□□□□□ -1.25
NUP50-217ENST00000491860 GNGT2O14610 69 aa7.27□□□□□ -1.25
NUP50-217ENST00000491860 PRODHO43272 600 aa7.27□□□□□ -1.25
NUP50-217ENST00000491860 GLCEO94923 617 aa7.27□□□□□ -1.25
NUP50-217ENST00000491860 CST1P01037 141 aa7.27□□□□□ -1.25
NUP50-217ENST00000491860 LHBP01229 141 aa7.27□□□□□ -1.25
NUP50-217ENST00000491860 GRPP07492 148 aa7.27□□□□□ -1.25
NUP50-217ENST00000491860 ATP6V1B2P21281 511 aa7.27□□□□□ -1.25
NUP50-217ENST00000491860 RPS27P42677 84 aaKnown RBP7.27□□□□□ -1.25
NUP50-217ENST00000491860 FAM3AP98173 230 aa7.27□□□□□ -1.25
NUP50-217ENST00000491860 GUCA2AQ02747 115 aa7.27□□□□□ -1.25
NUP50-217ENST00000491860 SLC35D3Q5M8T2 416 aa7.27□□□□□ -1.25
NUP50-217ENST00000491860 FAM201AQ5SY85 155 aa7.27□□□□□ -1.25
NUP50-217ENST00000491860 LYPD2Q6UXB3 125 aa7.27□□□□□ -1.25
NUP50-217ENST00000491860 Q6YL49 198 aa7.27□□□□□ -1.25
NUP50-217ENST00000491860 SPATC1Q76KD6 591 aa7.27□□□□□ -1.25
NUP50-217ENST00000491860 SLC16A9Q7RTY1 509 aa7.27□□□□□ -1.25
NUP50-217ENST00000491860 DPY19L4Q7Z388 723 aa7.27□□□□□ -1.25
NUP50-217ENST00000491860 ERI1Q8IV48 349 aaKnown RBP7.27□□□□□ -1.25
NUP50-217ENST00000491860 GALNT4Q8N4A0 578 aa7.27□□□□□ -1.25
NUP50-217ENST00000491860 BOLLQ8N9W6 283 aaKnown RBP7.27□□□□□ -1.25
NUP50-217ENST00000491860 OR10G2Q8NGC3 310 aa7.27□□□□□ -1.25
NUP50-217ENST00000491860 OR51L1Q8NGJ5 315 aa7.27□□□□□ -1.25
NUP50-217ENST00000491860 OR8D4Q8NGM9 314 aa7.27□□□□□ -1.25
NUP50-217ENST00000491860 OR9Q1Q8NGQ5 310 aa7.27□□□□□ -1.25
NUP50-217ENST00000491860 OR10Z1Q8NGY1 313 aa7.27□□□□□ -1.25
NUP50-217ENST00000491860 OR6N2Q8NGY6 317 aa7.27□□□□□ -1.25
NUP50-217ENST00000491860 GIPC3Q8TF64 312 aa7.27□□□□□ -1.25
NUP50-217ENST00000491860 RNF133Q8WVZ7 376 aa7.27□□□□□ -1.25
NUP50-217ENST00000491860 DNAJC9Q8WXX5 260 aa7.27□□□□□ -1.25
NUP50-217ENST00000491860 LRTOMTQ8WZ04 291 aa7.27□□□□□ -1.25
NUP50-217ENST00000491860 TMIGD2Q96BF3 282 aa7.27□□□□□ -1.25
NUP50-217ENST00000491860 C1orf147Q96MC9 270 aaPredicted RBP7.27□□□□□ -1.25
NUP50-217ENST00000491860 WDFY2Q96P53 400 aa7.27□□□□□ -1.25
NUP50-217ENST00000491860 PCGF1Q9BSM1 259 aa7.27□□□□□ -1.25
NUP50-217ENST00000491860 RTL8AQ9BWD3 113 aa7.27□□□□□ -1.25
NUP50-217ENST00000491860 MARCH7Q9H992 704 aa7.27□□□□□ -1.25
NUP50-217ENST00000491860 ACOXLQ9NUZ1 547 aa7.27□□□□□ -1.25
NUP50-217ENST00000491860 ARMC1Q9NVT9 282 aa7.27□□□□□ -1.25
NUP50-217ENST00000491860 U3KQV3 271 aa7.27□□□□□ -1.25
NUP50-217ENST00000491860 IGHV3OR16-10A0A075B7F0 116 aa7.26□□□□□ -1.25
NUP50-217ENST00000491860 BTBD17A6NE02 478 aa7.26□□□□□ -1.25
NUP50-217ENST00000491860 NKX6-3A6NJ46 265 aa7.26□□□□□ -1.25
NUP50-217ENST00000491860 ACOD1A6NK06 481 aa7.26□□□□□ -1.25
NUP50-217ENST00000491860 AQP12BA6NM10 295 aa7.26□□□□□ -1.25
NUP50-217ENST00000491860 C22orf46C9J442 243 aa7.26□□□□□ -1.25
NUP50-217ENST00000491860 PRR23D1E9PI22 279 aaPredicted RBP7.26□□□□□ -1.25
NUP50-217ENST00000491860 HOXA3O43365 443 aaPredicted RBP7.26□□□□□ -1.25
NUP50-217ENST00000491860 NDUFA7O95182 113 aa7.26□□□□□ -1.25
NUP50-217ENST00000491860 SOX14O95416 240 aa7.26□□□□□ -1.25
NUP50-217ENST00000491860 KNG1P01042 644 aa7.26□□□□□ -1.25
NUP50-217ENST00000491860 GYPBP06028 91 aa7.26□□□□□ -1.25
NUP50-217ENST00000491860 LYNP07948 512 aa7.26□□□□□ -1.25
NUP50-217ENST00000491860 H2BFMP0C1H6 154 aa7.26□□□□□ -1.25
NUP50-217ENST00000491860 PRR23D2P0DMB1 279 aaPredicted RBP7.26□□□□□ -1.25
NUP50-217ENST00000491860 SLC2A1P11166 492 aa7.26□□□□□ -1.25
NUP50-217ENST00000491860 PRSS12P56730 875 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms