RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 TDGF1P3P51864 188 aa20.03■□□□□ 0.8
USF3-203ENST00000491165 ROM1Q03395 351 aa20.03■□□□□ 0.8
USF3-203ENST00000491165 C2orf68Q2NKX9 166 aa20.03■□□□□ 0.8
USF3-203ENST00000491165 FAM166AQ6J272 317 aa20.03■□□□□ 0.8
USF3-203ENST00000491165 GPAT4Q86UL3 456 aa20.03■□□□□ 0.8
USF3-203ENST00000491165 MUC20Q8N307 709 aaPredicted RBP20.03■□□□□ 0.8
USF3-203ENST00000491165 WDYHV1Q96HA8 205 aa20.03■□□□□ 0.8
USF3-203ENST00000491165 ATG5Q9H1Y0 275 aa20.03■□□□□ 0.8
USF3-203ENST00000491165 MRPL22Q9NWU5 206 aaKnown RBP20.03■□□□□ 0.8
USF3-203ENST00000491165 CKLFQ9UBR5 152 aa20.03■□□□□ 0.8
USF3-203ENST00000491165 TMEM272A0A1B0GTI8 110 aa20.02■□□□□ 0.8
USF3-203ENST00000491165 PMS2P2O95744 297 aa20.02■□□□□ 0.8
USF3-203ENST00000491165 WNT11O96014 354 aa20.02■□□□□ 0.8
USF3-203ENST00000491165 ACTL6AO96019 429 aa20.02■□□□□ 0.8
USF3-203ENST00000491165 PNPP00491 289 aa20.02■□□□□ 0.8
USF3-203ENST00000491165 CRYABP02511 175 aaKnown RBP20.02■□□□□ 0.8
USF3-203ENST00000491165 CD3DP04234 171 aa20.02■□□□□ 0.8
USF3-203ENST00000491165 FKBP2P26885 142 aaKnown RBP20.02■□□□□ 0.8
USF3-203ENST00000491165 EIF1AXP47813 144 aaKnown RBP20.02■□□□□ 0.8
USF3-203ENST00000491165 ACTBP60709 375 aa20.02■□□□□ 0.8
USF3-203ENST00000491165 ACTG1P63261 375 aa20.02■□□□□ 0.8
USF3-203ENST00000491165 STEAP1BQ6NZ63 245 aa20.02■□□□□ 0.8
USF3-203ENST00000491165 KCTD18Q6PI47 426 aaPredicted RBP20.02■□□□□ 0.8
USF3-203ENST00000491165 TMUB2Q71RG4 321 aa20.02■□□□□ 0.8
USF3-203ENST00000491165 TNFAIP8L1Q8WVP5 186 aa20.02■□□□□ 0.8
USF3-203ENST00000491165 VSX1Q9NZR4 365 aaPredicted RBP20.02■□□□□ 0.8
USF3-203ENST00000491165 IGLV1-36A0A0B4J1U3 117 aa20.02■□□□□ 0.79
USF3-203ENST00000491165 NPIPA2E9PIF3 369 aa20.02■□□□□ 0.79
USF3-203ENST00000491165 NPIPA3F8WFD2 350 aa20.02■□□□□ 0.79
USF3-203ENST00000491165 CXCL13O43927 109 aa20.02■□□□□ 0.79
USF3-203ENST00000491165 B3GALNT1O75752 331 aa20.02■□□□□ 0.79
USF3-203ENST00000491165 ADAM8P78325 824 aa20.02■□□□□ 0.79
USF3-203ENST00000491165 H3F3AP84243 136 aa20.02■□□□□ 0.79
USF3-203ENST00000491165 GLT8D1Q68CQ7 371 aa20.02■□□□□ 0.79
USF3-203ENST00000491165 TMEM225Q6GV28 225 aa20.02■□□□□ 0.79
USF3-203ENST00000491165 ASPHD2Q6ICH7 369 aa20.02■□□□□ 0.79
USF3-203ENST00000491165 PLPP7Q8NBV4 271 aa20.02■□□□□ 0.79
USF3-203ENST00000491165 OR8S1Q8NH09 359 aa20.02■□□□□ 0.79
USF3-203ENST00000491165 GPX8Q8TED1 209 aa20.02■□□□□ 0.79
USF3-203ENST00000491165 WBP1Q96G27 269 aa20.02■□□□□ 0.79
USF3-203ENST00000491165 TXNIPQ9H3M7 391 aa20.02■□□□□ 0.79
USF3-203ENST00000491165 TMEM138Q9NPI0 162 aa20.02■□□□□ 0.79
USF3-203ENST00000491165 FXYD6-FXYD2A0A087WZ82 144 aa20.01■□□□□ 0.79
USF3-203ENST00000491165 GJE1A6NN92 205 aa20.01■□□□□ 0.79
USF3-203ENST00000491165 CD2P06729 351 aa20.01■□□□□ 0.79
USF3-203ENST00000491165 HLA-DOBP13765 273 aa20.01■□□□□ 0.79
USF3-203ENST00000491165 PPP3CBP16298 524 aa20.01■□□□□ 0.79
USF3-203ENST00000491165 RIDAP52758 137 aaKnown RBP20.01■□□□□ 0.79
USF3-203ENST00000491165 UBE2MP61081 183 aaKnown RBP20.01■□□□□ 0.79
USF3-203ENST00000491165 MPPED2Q15777 294 aa20.01■□□□□ 0.79
USF3-203ENST00000491165 SFRP5Q5T4F7 317 aa20.01■□□□□ 0.79
USF3-203ENST00000491165 OR6S1Q8NH40 331 aa20.01■□□□□ 0.79
USF3-203ENST00000491165 OR2V1Q8NHB1 315 aa20.01■□□□□ 0.79
USF3-203ENST00000491165 FXYD6Q9H0Q3 95 aa20.01■□□□□ 0.79
USF3-203ENST00000491165 ALKBH4Q9NXW9 302 aa20.01■□□□□ 0.79
USF3-203ENST00000491165 MS4A18H0YCH9 400 aa20■□□□□ 0.79
USF3-203ENST00000491165 AQP7O14520 342 aa20■□□□□ 0.79
USF3-203ENST00000491165 MFGE8Q08431 387 aaPredicted RBP20■□□□□ 0.79
USF3-203ENST00000491165 MS4A18Q3C1V0 323 aa20■□□□□ 0.79
USF3-203ENST00000491165 OR7E24Q6IFN5 339 aa20■□□□□ 0.79
USF3-203ENST00000491165 SREK1IP1Q8N9Q2 155 aaPredicted RBP20■□□□□ 0.79
USF3-203ENST00000491165 ASB5Q8WWX0 329 aa20■□□□□ 0.79
USF3-203ENST00000491165 DVL3Q92997 716 aaPredicted RBP20■□□□□ 0.79
USF3-203ENST00000491165 PPP1R14AQ96A00 147 aa20■□□□□ 0.79
USF3-203ENST00000491165 MED9Q9NWA0 146 aa20■□□□□ 0.79
USF3-203ENST00000491165 SDHAF2Q9NX18 166 aa20■□□□□ 0.79
USF3-203ENST00000491165 SHANK1Q9Y566 2161 aa20■□□□□ 0.79
USF3-203ENST00000491165 COL6A6A6NMZ7 2263 aa20■□□□□ 0.79
USF3-203ENST00000491165 PLPP3O14495 311 aa20■□□□□ 0.79
USF3-203ENST00000491165 CTLA4P16410 223 aa20■□□□□ 0.79
USF3-203ENST00000491165 CARD18P57730 90 aa20■□□□□ 0.79
USF3-203ENST00000491165 GMFBP60983 142 aa20■□□□□ 0.79
USF3-203ENST00000491165 EIF2B1Q14232 305 aaKnown RBP20■□□□□ 0.79
USF3-203ENST00000491165 C4orf46Q504U0 113 aa20■□□□□ 0.79
USF3-203ENST00000491165 CATSPERDQ86XM0 798 aa20■□□□□ 0.79
USF3-203ENST00000491165 GABRG1Q8N1C3 465 aa20■□□□□ 0.79
USF3-203ENST00000491165 SCARB1Q8WTV0 552 aa20■□□□□ 0.79
USF3-203ENST00000491165 ASB13Q8WXK3 278 aa20■□□□□ 0.79
USF3-203ENST00000491165 SLC25A28Q96A46 364 aa20■□□□□ 0.79
USF3-203ENST00000491165 REG4Q9BYZ8 158 aa20■□□□□ 0.79
USF3-203ENST00000491165 ARL6Q9H0F7 186 aa20■□□□□ 0.79
USF3-203ENST00000491165 B3GAT1Q9P2W7 334 aa20■□□□□ 0.79
USF3-203ENST00000491165 UPB1Q9UBR1 384 aa20■□□□□ 0.79
USF3-203ENST00000491165 SULT1C2O00338 296 aa19.99■□□□□ 0.79
USF3-203ENST00000491165 SMAD9O15198 467 aaKnown RBP19.99■□□□□ 0.79
USF3-203ENST00000491165 FCER2P06734 321 aa19.99■□□□□ 0.79
USF3-203ENST00000491165 HTR2CP28335 458 aa19.99■□□□□ 0.79
USF3-203ENST00000491165 TAS2R19P59542 299 aa19.99■□□□□ 0.79
USF3-203ENST00000491165 RAC3P60763 192 aa19.99■□□□□ 0.79
USF3-203ENST00000491165 DCAF12L2Q5VW00 463 aa19.99■□□□□ 0.79
USF3-203ENST00000491165 C11orf88Q6PI97 169 aa19.99■□□□□ 0.79
USF3-203ENST00000491165 RP1L1Q8IWN7 2480 aaPredicted RBP19.99■□□□□ 0.79
USF3-203ENST00000491165 GALNT11Q8NCW6 608 aa19.99■□□□□ 0.79
USF3-203ENST00000491165 OR5M9Q8NGP3 310 aa19.99■□□□□ 0.79
USF3-203ENST00000491165 SLC22A23A1A5C7 686 aa19.99■□□□□ 0.79
USF3-203ENST00000491165 MFSD2BA6NFX1 497 aa19.99■□□□□ 0.79
USF3-203ENST00000491165 LPLP06858 475 aa19.99■□□□□ 0.79
USF3-203ENST00000491165 NMBP08949 121 aa19.99■□□□□ 0.79
USF3-203ENST00000491165 FSTP19883 344 aa19.99■□□□□ 0.79
USF3-203ENST00000491165 ZP3P21754 424 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms