RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 ST8SIA3O43173 380 aa11.5□□□□□ -0.57
SHOX2-205ENST00000490689 IGKV1D-16P01601 117 aa11.5□□□□□ -0.57
SHOX2-205ENST00000490689 H2AFB1P0C5Y9 115 aa11.5□□□□□ -0.57
SHOX2-205ENST00000490689 LAP3P28838 519 aa11.5□□□□□ -0.57
SHOX2-205ENST00000490689 MPGP29372 298 aa11.5□□□□□ -0.57
SHOX2-205ENST00000490689 RABIFP47224 123 aa11.5□□□□□ -0.57
SHOX2-205ENST00000490689 TLE1Q04724 770 aa11.5□□□□□ -0.57
SHOX2-205ENST00000490689 SKA3Q8IX90 412 aa11.5□□□□□ -0.57
SHOX2-205ENST00000490689 NT5CQ8TCD5 201 aa11.5□□□□□ -0.57
SHOX2-205ENST00000490689 AICDAQ9GZX7 198 aa11.5□□□□□ -0.57
SHOX2-205ENST00000490689 A0A1W2PNR3 127 aa11.5□□□□□ -0.57
SHOX2-205ENST00000490689 TAAR5O14804 337 aa11.5□□□□□ -0.57
SHOX2-205ENST00000490689 FOLR1P15328 257 aa11.5□□□□□ -0.57
SHOX2-205ENST00000490689 RPS11P62280 158 aaKnown RBP eCLIP11.5□□□□□ -0.57
SHOX2-205ENST00000490689 HSF1Q00613 529 aa11.5□□□□□ -0.57
SHOX2-205ENST00000490689 OR2A2Q6IF42 318 aa11.5□□□□□ -0.57
SHOX2-205ENST00000490689 CLEC18BQ6UXF7 455 aa11.5□□□□□ -0.57
SHOX2-205ENST00000490689 ZDHHC22Q8N966 263 aa11.5□□□□□ -0.57
SHOX2-205ENST00000490689 AKR7LQ8NHP1 331 aa11.5□□□□□ -0.57
SHOX2-205ENST00000490689 NRIP2Q9BQI9 281 aa11.5□□□□□ -0.57
SHOX2-205ENST00000490689 CHST11Q9NPF2 352 aa11.5□□□□□ -0.57
SHOX2-205ENST00000490689 KLK13Q9UKR3 277 aa11.5□□□□□ -0.57
SHOX2-205ENST00000490689 SLC5A6Q9Y289 635 aa11.5□□□□□ -0.57
SHOX2-205ENST00000490689 SERPINE2P07093 398 aa11.5□□□□□ -0.57
SHOX2-205ENST00000490689 KIR3DL2P43630 455 aa11.5□□□□□ -0.57
SHOX2-205ENST00000490689 ZNF84P51523 738 aa11.5□□□□□ -0.57
SHOX2-205ENST00000490689 DVL1P1P54792 670 aaPredicted RBP11.5□□□□□ -0.57
SHOX2-205ENST00000490689 PRSS12P56730 875 aa11.5□□□□□ -0.57
SHOX2-205ENST00000490689 HFEQ30201 348 aa11.5□□□□□ -0.57
SHOX2-205ENST00000490689 H1FNTQ75WM6 255 aaPredicted RBP11.5□□□□□ -0.57
SHOX2-205ENST00000490689 NECAP1Q8NC96 275 aa11.5□□□□□ -0.57
SHOX2-205ENST00000490689 ASB5Q8WWX0 329 aa11.5□□□□□ -0.57
SHOX2-205ENST00000490689 SEC11CQ9BY50 192 aa11.5□□□□□ -0.57
SHOX2-205ENST00000490689 AK3Q9UIJ7 227 aa11.5□□□□□ -0.57
SHOX2-205ENST00000490689 G3V3Y1 287 aa11.49□□□□□ -0.57
SHOX2-205ENST00000490689 MSTNO14793 375 aa11.49□□□□□ -0.57
SHOX2-205ENST00000490689 CXCL10P02778 98 aa11.49□□□□□ -0.57
SHOX2-205ENST00000490689 NR2C1P13056 603 aa11.49□□□□□ -0.57
SHOX2-205ENST00000490689 TMEM33P57088 247 aa11.49□□□□□ -0.57
SHOX2-205ENST00000490689 TESK1Q15569 626 aa11.49□□□□□ -0.57
SHOX2-205ENST00000490689 C16orf47Q6ZP98 133 aaPredicted RBP11.49□□□□□ -0.57
SHOX2-205ENST00000490689 CDC20BQ86Y33 519 aa11.49□□□□□ -0.57
SHOX2-205ENST00000490689 GPR137CQ8N3F9 429 aa11.49□□□□□ -0.57
SHOX2-205ENST00000490689 C17orf78Q8N4C9 275 aa11.49□□□□□ -0.57
SHOX2-205ENST00000490689 PIGCQ92535 297 aa11.49□□□□□ -0.57
SHOX2-205ENST00000490689 RRNAD1Q96FB5 475 aaKnown RBP11.49□□□□□ -0.57
SHOX2-205ENST00000490689 SOCS1O15524 211 aa11.49□□□□□ -0.57
SHOX2-205ENST00000490689 CST7O76096 145 aa11.49□□□□□ -0.57
SHOX2-205ENST00000490689 MT-ATP6P00846 226 aa11.49□□□□□ -0.57
SHOX2-205ENST00000490689 QDPRP09417 244 aa11.49□□□□□ -0.57
SHOX2-205ENST00000490689 PIGPP57054 158 aa11.49□□□□□ -0.57
SHOX2-205ENST00000490689 PDCD1Q15116 288 aa11.49□□□□□ -0.57
SHOX2-205ENST00000490689 PRSS54Q6PEW0 395 aa11.49□□□□□ -0.57
SHOX2-205ENST00000490689 BRICD5Q6PL45 260 aa11.49□□□□□ -0.57
SHOX2-205ENST00000490689 PLXDC2Q6UX71 529 aa11.49□□□□□ -0.57
SHOX2-205ENST00000490689 SLC25A42Q86VD7 318 aa11.49□□□□□ -0.57
SHOX2-205ENST00000490689 CPNE4Q96A23 557 aaPredicted RBP11.49□□□□□ -0.57
SHOX2-205ENST00000490689 PRRX2Q99811 253 aa11.49□□□□□ -0.57
SHOX2-205ENST00000490689 SPIN2AQ99865 258 aa11.49□□□□□ -0.57
SHOX2-205ENST00000490689 SPIN2BQ9BPZ2 258 aa11.49□□□□□ -0.57
SHOX2-205ENST00000490689 ZCCHC4Q9H5U6 513 aa11.49□□□□□ -0.57
SHOX2-205ENST00000490689 GNG13Q9P2W3 67 aa11.49□□□□□ -0.57
SHOX2-205ENST00000490689 NPTNQ9Y639 398 aa11.49□□□□□ -0.57
SHOX2-205ENST00000490689 LINC00587B1AMM8 73 aa11.49□□□□□ -0.57
SHOX2-205ENST00000490689 ANGPTL7O43827 346 aa11.49□□□□□ -0.57
SHOX2-205ENST00000490689 YIF1AO95070 293 aa11.49□□□□□ -0.57
SHOX2-205ENST00000490689 PNPP00491 289 aa11.49□□□□□ -0.57
SHOX2-205ENST00000490689 OR5H8P0DN80 308 aa11.49□□□□□ -0.57
SHOX2-205ENST00000490689 FABP4P15090 132 aa11.49□□□□□ -0.57
SHOX2-205ENST00000490689 CSNK1A1P48729 337 aa11.49□□□□□ -0.57
SHOX2-205ENST00000490689 CLDN17P56750 224 aa11.49□□□□□ -0.57
SHOX2-205ENST00000490689 PABPC1L2AQ5JQF8 200 aa11.49□□□□□ -0.57
SHOX2-205ENST00000490689 OR2T2Q6IF00 324 aa11.49□□□□□ -0.57
SHOX2-205ENST00000490689 LCN15Q6UWW0 184 aa11.49□□□□□ -0.57
SHOX2-205ENST00000490689 GRINAQ7Z429 371 aa11.49□□□□□ -0.57
SHOX2-205ENST00000490689 S1PR5Q9H228 398 aa11.49□□□□□ -0.57
SHOX2-205ENST00000490689 TMEM74BQ9NUR3 256 aa11.49□□□□□ -0.57
SHOX2-205ENST00000490689 GDE1Q9NZC3 331 aa11.49□□□□□ -0.57
SHOX2-205ENST00000490689 GPR37O15354 613 aa11.49□□□□□ -0.57
SHOX2-205ENST00000490689 UPK3AO75631 287 aa11.49□□□□□ -0.57
SHOX2-205ENST00000490689 CST4P01036 141 aa11.49□□□□□ -0.57
SHOX2-205ENST00000490689 HSD17B7P56937 341 aa11.49□□□□□ -0.57
SHOX2-205ENST00000490689 SLC37A1P57057 533 aa11.49□□□□□ -0.57
SHOX2-205ENST00000490689 PCK2Q16822 640 aa11.49□□□□□ -0.57
SHOX2-205ENST00000490689 ETV3LQ6ZN32 361 aa11.49□□□□□ -0.57
SHOX2-205ENST00000490689 SLC36A1Q7Z2H8 476 aa11.49□□□□□ -0.57
SHOX2-205ENST00000490689 EMG1Q92979 244 aaKnown RBP11.49□□□□□ -0.57
SHOX2-205ENST00000490689 REEP6Q96HR9 211 aa11.49□□□□□ -0.57
SHOX2-205ENST00000490689 OR5AC2Q9NZP5 309 aa11.49□□□□□ -0.57
SHOX2-205ENST00000490689 KLHL13Q9P2N7 655 aa11.49□□□□□ -0.57
SHOX2-205ENST00000490689 TDRD6O60522 2096 aaKnown RBP11.48□□□□□ -0.57
SHOX2-205ENST00000490689 SCN10AQ9Y5Y9 1956 aa11.48□□□□□ -0.57
SHOX2-205ENST00000490689 H3BP45 60 aa11.48□□□□□ -0.57
SHOX2-205ENST00000490689 LMX1BO60663 402 aa11.48□□□□□ -0.57
SHOX2-205ENST00000490689 PPICP45877 212 aa11.48□□□□□ -0.57
SHOX2-205ENST00000490689 ZNF117Q03924 483 aa11.48□□□□□ -0.57
SHOX2-205ENST00000490689 ADIRFQ15847 76 aa11.48□□□□□ -0.57
SHOX2-205ENST00000490689 ZNF709Q8N972 641 aa11.48□□□□□ -0.57
SHOX2-205ENST00000490689 UBAC2Q8NBM4 344 aa11.48□□□□□ -0.57
SHOX2-205ENST00000490689 OR14L1PQ8NHC6 308 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms