RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 TMEM138Q9NPI0 162 aa18.72■□□□□ 0.59
SMC4-221ENST00000489573 EIF3KQ9UBQ5 218 aaKnown RBP18.72■□□□□ 0.59
SMC4-221ENST00000489573 STARD10Q9Y365 291 aa18.72■□□□□ 0.59
SMC4-221ENST00000489573 ATRXP46100 2492 aa18.71■□□□□ 0.59
SMC4-221ENST00000489573 ATXN7O15265 892 aaPredicted RBP18.71■□□□□ 0.59
SMC4-221ENST00000489573 SULT1B1O43704 296 aa18.71■□□□□ 0.59
SMC4-221ENST00000489573 ICMTO60725 284 aa18.71■□□□□ 0.59
SMC4-221ENST00000489573 ACKR3P25106 362 aa18.71■□□□□ 0.59
SMC4-221ENST00000489573 CFPP27918 469 aa18.71■□□□□ 0.59
SMC4-221ENST00000489573 CCKARP32238 428 aa18.71■□□□□ 0.59
SMC4-221ENST00000489573 OR8B8Q15620 311 aa18.71■□□□□ 0.59
SMC4-221ENST00000489573 OR5L1Q8NGL2 311 aa18.71■□□□□ 0.59
SMC4-221ENST00000489573 ZNF671Q8TAW3 534 aa18.71■□□□□ 0.59
SMC4-221ENST00000489573 TRMT10AQ8TBZ6 339 aaKnown RBP18.71■□□□□ 0.59
SMC4-221ENST00000489573 MUCL1Q96DR8 90 aa18.71■□□□□ 0.59
SMC4-221ENST00000489573 USB1Q9BQ65 265 aaKnown RBP18.71■□□□□ 0.59
SMC4-221ENST00000489573 CHST5Q9GZS9 411 aa18.71■□□□□ 0.59
SMC4-221ENST00000489573 OPA3Q9H6K4 179 aa18.71■□□□□ 0.59
SMC4-221ENST00000489573 PLGRKTQ9HBL7 147 aa18.71■□□□□ 0.59
SMC4-221ENST00000489573 PTTG3PQ9NZH4 202 aa18.71■□□□□ 0.59
SMC4-221ENST00000489573 IGSF10Q6WRI0 2623 aa18.7■□□□□ 0.58
SMC4-221ENST00000489573 ERCC1P07992 297 aaPredicted RBP18.7■□□□□ 0.58
SMC4-221ENST00000489573 CECR9P0C854 216 aa18.7■□□□□ 0.58
SMC4-221ENST00000489573 SNRPBP14678 240 aaKnown RBP18.7■□□□□ 0.58
SMC4-221ENST00000489573 TNFSF8P32971 234 aa18.7■□□□□ 0.58
SMC4-221ENST00000489573 TNK1Q13470 666 aa18.7■□□□□ 0.58
SMC4-221ENST00000489573 GK2Q14410 553 aaPredicted RBP18.7■□□□□ 0.58
SMC4-221ENST00000489573 ZNF846Q147U1 533 aa18.7■□□□□ 0.58
SMC4-221ENST00000489573 PPA1Q15181 289 aa18.7■□□□□ 0.58
SMC4-221ENST00000489573 UTS2BQ765I0 119 aa18.7■□□□□ 0.58
SMC4-221ENST00000489573 MRPL21Q7Z2W9 205 aaKnown RBP18.7■□□□□ 0.58
SMC4-221ENST00000489573 CCDC190Q86UF4 302 aa18.7■□□□□ 0.58
SMC4-221ENST00000489573 MRI1Q9BV20 369 aa18.7■□□□□ 0.58
SMC4-221ENST00000489573 REPIN1Q9BWE0 567 aaKnown RBP18.7■□□□□ 0.58
SMC4-221ENST00000489573 RTTNQ86VV8 2226 aa18.7■□□□□ 0.58
SMC4-221ENST00000489573 A0A0B4J203 849 aa18.69■□□□□ 0.58
SMC4-221ENST00000489573 IGHV1-18A0A0C4DH31 117 aa18.69■□□□□ 0.58
SMC4-221ENST00000489573 C16orf97H3BN30 126 aa18.69■□□□□ 0.58
SMC4-221ENST00000489573 HPGDSO60760 199 aa18.69■□□□□ 0.58
SMC4-221ENST00000489573 SMPD2O60906 423 aa18.69■□□□□ 0.58
SMC4-221ENST00000489573 PAHP00439 452 aa18.69■□□□□ 0.58
SMC4-221ENST00000489573 CD37P11049 281 aa18.69■□□□□ 0.58
SMC4-221ENST00000489573 ETV6P41212 452 aa18.69■□□□□ 0.58
SMC4-221ENST00000489573 PRSS12P56730 875 aa18.69■□□□□ 0.58
SMC4-221ENST00000489573 TAB1Q15750 504 aa18.69■□□□□ 0.58
SMC4-221ENST00000489573 C3orf36Q3SXR2 165 aa18.69■□□□□ 0.58
SMC4-221ENST00000489573 OR5AS1Q8N127 324 aa18.69■□□□□ 0.58
SMC4-221ENST00000489573 ZFAND2BQ8WV99 257 aa18.69■□□□□ 0.58
SMC4-221ENST00000489573 ITFG2Q969R8 447 aa18.69■□□□□ 0.58
SMC4-221ENST00000489573 FOXRED1Q96CU9 486 aaPredicted RBP18.69■□□□□ 0.58
SMC4-221ENST00000489573 OR10A4Q9H209 315 aa18.69■□□□□ 0.58
SMC4-221ENST00000489573 OR51B6Q9H340 312 aa18.69■□□□□ 0.58
SMC4-221ENST00000489573 POFUT1Q9H488 388 aa18.69■□□□□ 0.58
SMC4-221ENST00000489573 STEAP1Q9UHE8 339 aa18.69■□□□□ 0.58
SMC4-221ENST00000489573 ADAM30Q9UKF2 790 aa18.69■□□□□ 0.58
SMC4-221ENST00000489573 SLC17A2O00624 439 aa18.68■□□□□ 0.58
SMC4-221ENST00000489573 CHRNB4P30926 498 aa18.68■□□□□ 0.58
SMC4-221ENST00000489573 RAB11BQ15907 218 aa18.68■□□□□ 0.58
SMC4-221ENST00000489573 SPANXN2Q5MJ10 180 aa18.68■□□□□ 0.58
SMC4-221ENST00000489573 ZBTB37Q5TC79 503 aa18.68■□□□□ 0.58
SMC4-221ENST00000489573 FJX1Q86VR8 437 aa18.68■□□□□ 0.58
SMC4-221ENST00000489573 OR52N4Q8NGI2 321 aa18.68■□□□□ 0.58
SMC4-221ENST00000489573 LIN7BQ9HAP6 207 aa18.68■□□□□ 0.58
SMC4-221ENST00000489573 CGGBP1Q9UFW8 167 aaPredicted RBP18.68■□□□□ 0.58
SMC4-221ENST00000489573 ALX3O95076 343 aa18.68■□□□□ 0.58
SMC4-221ENST00000489573 CALCBP10092 127 aa18.68■□□□□ 0.58
SMC4-221ENST00000489573 ZNF35P13682 527 aa18.68■□□□□ 0.58
SMC4-221ENST00000489573 ASCL1P50553 236 aa18.68■□□□□ 0.58
SMC4-221ENST00000489573 ZNF83P51522 516 aa18.68■□□□□ 0.58
SMC4-221ENST00000489573 CLDN12P56749 244 aa18.68■□□□□ 0.58
SMC4-221ENST00000489573 JAGN1Q8N5M9 183 aa18.68■□□□□ 0.58
SMC4-221ENST00000489573 SAMD12Q8N8I0 201 aa18.68■□□□□ 0.58
SMC4-221ENST00000489573 OR5H6Q8NGV6 325 aa18.68■□□□□ 0.58
SMC4-221ENST00000489573 LGALS14Q8TCE9 139 aa18.68■□□□□ 0.58
SMC4-221ENST00000489573 COQ3Q9NZJ6 369 aa18.68■□□□□ 0.58
SMC4-221ENST00000489573 SPATA2Q9UM82 520 aa18.68■□□□□ 0.58
SMC4-221ENST00000489573 IGKV1-9A0A0C4DH69 117 aa18.67■□□□□ 0.58
SMC4-221ENST00000489573 MAGEB3O15480 346 aa18.67■□□□□ 0.58
SMC4-221ENST00000489573 ALDOBP05062 364 aa18.67■□□□□ 0.58
SMC4-221ENST00000489573 OCMP0CE72 109 aaPredicted RBP18.67■□□□□ 0.58
SMC4-221ENST00000489573 FAM157BP0CG42 384 aa18.67■□□□□ 0.58
SMC4-221ENST00000489573 ADORA2A-AS1P86434 159 aa18.67■□□□□ 0.58
SMC4-221ENST00000489573 ZNF45Q02386 682 aa18.67■□□□□ 0.58
SMC4-221ENST00000489573 HLXQ14774 488 aaPredicted RBP18.67■□□□□ 0.58
SMC4-221ENST00000489573 FAM166AQ6J272 317 aa18.67■□□□□ 0.58
SMC4-221ENST00000489573 LYPD6Q86Y78 171 aa18.67■□□□□ 0.58
SMC4-221ENST00000489573 OR56B2PQ8NGI1 322 aa18.67■□□□□ 0.58
SMC4-221ENST00000489573 OR6M1Q8NGM8 313 aa18.67■□□□□ 0.58
SMC4-221ENST00000489573 METTL17Q9H7H0 456 aaPredicted RBP18.67■□□□□ 0.58
SMC4-221ENST00000489573 POLEQ07864 2286 aa18.66■□□□□ 0.58
SMC4-221ENST00000489573 RP1L1Q8IWN7 2480 aaPredicted RBP18.66■□□□□ 0.58
SMC4-221ENST00000489573 ZNF816-ZNF321PA0A0X1KG74 233 aa18.66■□□□□ 0.58
SMC4-221ENST00000489573 GGT3PA6NGU5 568 aa18.66■□□□□ 0.58
SMC4-221ENST00000489573 HCKP08631 526 aa18.66■□□□□ 0.58
SMC4-221ENST00000489573 HTR2CP28335 458 aa18.66■□□□□ 0.58
SMC4-221ENST00000489573 SCAND1P57086 179 aa18.66■□□□□ 0.58
SMC4-221ENST00000489573 PPP1CBP62140 327 aa18.66■□□□□ 0.58
SMC4-221ENST00000489573 P2RY14Q15391 338 aa18.66■□□□□ 0.58
SMC4-221ENST00000489573 UBE2V2Q15819 145 aa18.66■□□□□ 0.58
SMC4-221ENST00000489573 C1orf100Q5SVJ3 147 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms