RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 RABL3Q5HYI8 236 aa7.34□□□□□ -1.23
SSBP1-212ENST00000489378 CFAP161Q6P656 301 aa7.34□□□□□ -1.23
SSBP1-212ENST00000489378 SLC2A7Q6PXP3 512 aa7.34□□□□□ -1.23
SSBP1-212ENST00000489378 SLC36A1Q7Z2H8 476 aa7.34□□□□□ -1.23
SSBP1-212ENST00000489378 LHFPL4Q7Z7J7 247 aa7.34□□□□□ -1.23
SSBP1-212ENST00000489378 CENPVQ7Z7K6 275 aaPredicted RBP7.34□□□□□ -1.23
SSBP1-212ENST00000489378 NKAIN4Q8IVV8 208 aa7.34□□□□□ -1.23
SSBP1-212ENST00000489378 MSRB3Q8IXL7 192 aa7.34□□□□□ -1.23
SSBP1-212ENST00000489378 TMEM255BQ8WV15 326 aa7.34□□□□□ -1.23
SSBP1-212ENST00000489378 LRRC29Q8WV35 223 aa7.34□□□□□ -1.23
SSBP1-212ENST00000489378 GTF2H4Q92759 462 aa7.34□□□□□ -1.23
SSBP1-212ENST00000489378 SLCO4A1Q96BD0 722 aa7.34□□□□□ -1.23
SSBP1-212ENST00000489378 ELAC2Q9BQ52 826 aaKnown RBP7.34□□□□□ -1.23
SSBP1-212ENST00000489378 MYLK2Q9H1R3 596 aa7.34□□□□□ -1.23
SSBP1-212ENST00000489378 EVA1AQ9H8M9 152 aa7.34□□□□□ -1.23
SSBP1-212ENST00000489378 PNPOQ9NVS9 261 aa7.34□□□□□ -1.23
SSBP1-212ENST00000489378 VSX1Q9NZR4 365 aaPredicted RBP7.34□□□□□ -1.23
SSBP1-212ENST00000489378 ZMAT5Q9UDW3 170 aaKnown RBP7.34□□□□□ -1.23
SSBP1-212ENST00000489378 RAP2CQ9Y3L5 183 aa7.34□□□□□ -1.23
SSBP1-212ENST00000489378 U3KQE9 123 aa7.34□□□□□ -1.23
SSBP1-212ENST00000489378 A0A1W2PQ09 198 aa7.33□□□□□ -1.24
SSBP1-212ENST00000489378 H0YAE9 185 aa7.33□□□□□ -1.24
SSBP1-212ENST00000489378 ALDOBP05062 364 aa7.33□□□□□ -1.24
SSBP1-212ENST00000489378 MUC1P15941 1255 aaPredicted RBP7.33□□□□□ -1.24
SSBP1-212ENST00000489378 THBS3P49746 956 aa7.33□□□□□ -1.24
SSBP1-212ENST00000489378 GSK3BP49841 420 aa7.33□□□□□ -1.24
SSBP1-212ENST00000489378 CTXN1P60606 82 aa7.33□□□□□ -1.24
SSBP1-212ENST00000489378 BLMHQ13867 455 aa7.33□□□□□ -1.24
SSBP1-212ENST00000489378 C21orf62-AS1Q17RA5 79 aa7.33□□□□□ -1.24
SSBP1-212ENST00000489378 LRRC10Q5BKY1 277 aa7.33□□□□□ -1.24
SSBP1-212ENST00000489378 MSANTD1Q6ZTZ1 278 aa7.33□□□□□ -1.24
SSBP1-212ENST00000489378 C11orf53Q8IXP5 236 aa7.33□□□□□ -1.24
SSBP1-212ENST00000489378 MKXQ8IYA7 352 aa7.33□□□□□ -1.24
SSBP1-212ENST00000489378 LRRC75AQ8NAA5 344 aa7.33□□□□□ -1.24
SSBP1-212ENST00000489378 OR5T2Q8NGG2 359 aa7.33□□□□□ -1.24
SSBP1-212ENST00000489378 OR9I1Q8NGQ6 314 aa7.33□□□□□ -1.24
SSBP1-212ENST00000489378 LIPHQ8WWY8 451 aa7.33□□□□□ -1.24
SSBP1-212ENST00000489378 WDR89Q96FK6 387 aaPredicted RBP7.33□□□□□ -1.24
SSBP1-212ENST00000489378 LYZL4Q96KX0 146 aa7.33□□□□□ -1.24
SSBP1-212ENST00000489378 ZNF649Q9BS31 505 aa7.33□□□□□ -1.24
SSBP1-212ENST00000489378 IKZF5Q9H5V7 419 aa7.33□□□□□ -1.24
SSBP1-212ENST00000489378 WDR55Q9H6Y2 383 aaPredicted RBP7.33□□□□□ -1.24
SSBP1-212ENST00000489378 ELL3Q9HB65 397 aaPredicted RBP7.33□□□□□ -1.24
SSBP1-212ENST00000489378 ATPIF1Q9UII2 106 aa7.33□□□□□ -1.24
SSBP1-212ENST00000489378 AURKCQ9UQB9 309 aa7.33□□□□□ -1.24
SSBP1-212ENST00000489378 A6NIZ1 184 aa7.32□□□□□ -1.24
SSBP1-212ENST00000489378 CD300LBA8K4G0 201 aa7.32□□□□□ -1.24
SSBP1-212ENST00000489378 GMDSO60547 372 aa7.32□□□□□ -1.24
SSBP1-212ENST00000489378 CTLA4P16410 223 aa7.32□□□□□ -1.24
SSBP1-212ENST00000489378 PAICSP22234 425 aaKnown RBP7.32□□□□□ -1.24
SSBP1-212ENST00000489378 LUMP51884 338 aaPredicted RBP7.32□□□□□ -1.24
SSBP1-212ENST00000489378 RAP1BP61224 184 aa7.32□□□□□ -1.24
SSBP1-212ENST00000489378 RAP1AP62834 184 aa7.32□□□□□ -1.24
SSBP1-212ENST00000489378 DGUOKQ16854 277 aa7.32□□□□□ -1.24
SSBP1-212ENST00000489378 KRTAP27-1Q3LI81 207 aa7.32□□□□□ -1.24
SSBP1-212ENST00000489378 C18orf65Q6ZTR6 163 aa7.32□□□□□ -1.24
SSBP1-212ENST00000489378 PGAP1Q75T13 922 aa7.32□□□□□ -1.24
SSBP1-212ENST00000489378 WDR86Q86TI4 376 aa7.32□□□□□ -1.24
SSBP1-212ENST00000489378 NAA40Q86UY6 237 aa7.32□□□□□ -1.24
SSBP1-212ENST00000489378 ZBTB46Q86UZ6 589 aa7.32□□□□□ -1.24
SSBP1-212ENST00000489378 OR4X2Q8NGF9 303 aa7.32□□□□□ -1.24
SSBP1-212ENST00000489378 OR5D13Q8NGL4 314 aa7.32□□□□□ -1.24
SSBP1-212ENST00000489378 OR9Q1Q8NGQ5 310 aa7.32□□□□□ -1.24
SSBP1-212ENST00000489378 COQ7Q99807 217 aa7.32□□□□□ -1.24
SSBP1-212ENST00000489378 KRTAP4-9Q9BYQ8 210 aa7.32□□□□□ -1.24
SSBP1-212ENST00000489378 SLC22A4Q9H015 551 aa7.32□□□□□ -1.24
SSBP1-212ENST00000489378 SLAMF8Q9P0V8 285 aa7.32□□□□□ -1.24
SSBP1-212ENST00000489378 SORL1Q92673 2214 aa7.31□□□□□ -1.24
SSBP1-212ENST00000489378 FAM90A8PA6NJQ4 464 aa7.31□□□□□ -1.24
SSBP1-212ENST00000489378 ACSM4P0C7M7 580 aa7.31□□□□□ -1.24
SSBP1-212ENST00000489378 ANOS1P23352 680 aa7.31□□□□□ -1.24
SSBP1-212ENST00000489378 COX7A1P24310 79 aa7.31□□□□□ -1.24
SSBP1-212ENST00000489378 POU1F1P28069 291 aa7.31□□□□□ -1.24
SSBP1-212ENST00000489378 ECI1P42126 302 aa7.31□□□□□ -1.24
SSBP1-212ENST00000489378 POLR2JP52435 117 aaKnown RBP7.31□□□□□ -1.24
SSBP1-212ENST00000489378 ERVFRD-1P60508 538 aa7.31□□□□□ -1.24
SSBP1-212ENST00000489378 CSNK2BP67870 215 aa7.31□□□□□ -1.24
SSBP1-212ENST00000489378 HIST1H3AP68431 136 aa7.31□□□□□ -1.24
SSBP1-212ENST00000489378 LCE4AQ5TA78 99 aa7.31□□□□□ -1.24
SSBP1-212ENST00000489378 ATPAF1Q5TC12 328 aaPredicted RBP7.31□□□□□ -1.24
SSBP1-212ENST00000489378 HIST2H3PS2Q5TEC6 136 aa7.31□□□□□ -1.24
SSBP1-212ENST00000489378 STUMQ69YW2 141 aa7.31□□□□□ -1.24
SSBP1-212ENST00000489378 MZT2AQ6P582 158 aa7.31□□□□□ -1.24
SSBP1-212ENST00000489378 KCTD18Q6PI47 426 aaPredicted RBP7.31□□□□□ -1.24
SSBP1-212ENST00000489378 CORO6Q6QEF8 472 aa7.31□□□□□ -1.24
SSBP1-212ENST00000489378 HIST2H3AQ71DI3 136 aa7.31□□□□□ -1.24
SSBP1-212ENST00000489378 MRPL21Q7Z2W9 205 aaKnown RBP7.31□□□□□ -1.24
SSBP1-212ENST00000489378 EGFL6Q8IUX8 553 aa7.31□□□□□ -1.24
SSBP1-212ENST00000489378 MICU2Q8IYU8 434 aa7.31□□□□□ -1.24
SSBP1-212ENST00000489378 RPS4Y2Q8TD47 263 aa7.31□□□□□ -1.24
SSBP1-212ENST00000489378 GAFA1Q96PS6 74 aa7.31□□□□□ -1.24
SSBP1-212ENST00000489378 TMEM38AQ9H6F2 299 aa7.31□□□□□ -1.24
SSBP1-212ENST00000489378 SLC25A10Q9UBX3 287 aaPredicted RBP7.31□□□□□ -1.24
SSBP1-212ENST00000489378 HAO1Q9UJM8 370 aa7.31□□□□□ -1.24
SSBP1-212ENST00000489378 ZNF391Q9UJN7 358 aa7.31□□□□□ -1.24
SSBP1-212ENST00000489378 RPS6KA6Q9UK32 745 aa7.31□□□□□ -1.24
SSBP1-212ENST00000489378 PITPNC1Q9UKF7 332 aa7.31□□□□□ -1.24
SSBP1-212ENST00000489378 NOP16Q9Y3C1 178 aaKnown RBP7.31□□□□□ -1.24
SSBP1-212ENST00000489378 TEX13CA0A0J9YWL9 993 aa7.3□□□□□ -1.24
SSBP1-212ENST00000489378 M0QX08 132 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms