RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 C6orf183Q5T699 404 aa1.86□□□□□ -2.11
RFC4-213ENST00000489028 Q5W150 140 aa1.86□□□□□ -2.11
RFC4-213ENST00000489028 ASCL4Q6XD76 172 aa1.86□□□□□ -2.11
RFC4-213ENST00000489028 RBM45Q8IUH3 476 aaKnown RBP1.86□□□□□ -2.11
RFC4-213ENST00000489028 ARRDC1Q8N5I2 433 aa1.86□□□□□ -2.11
RFC4-213ENST00000489028 WDR31Q8NA23 367 aa1.86□□□□□ -2.11
RFC4-213ENST00000489028 C11orf72Q8NBR9 251 aa1.86□□□□□ -2.11
RFC4-213ENST00000489028 OR10W1Q8NGF6 305 aa1.86□□□□□ -2.11
RFC4-213ENST00000489028 OR5AR1Q8NGP9 310 aa1.86□□□□□ -2.11
RFC4-213ENST00000489028 OR10Z1Q8NGY1 313 aa1.86□□□□□ -2.11
RFC4-213ENST00000489028 OR6N2Q8NGY6 317 aa1.86□□□□□ -2.11
RFC4-213ENST00000489028 NDNFQ8TB73 568 aa1.86□□□□□ -2.11
RFC4-213ENST00000489028 OR8D1Q8WZ84 308 aa1.86□□□□□ -2.11
RFC4-213ENST00000489028 TFGQ92734 400 aaPredicted RBP1.86□□□□□ -2.11
RFC4-213ENST00000489028 CENPNQ96H22 339 aaPredicted RBP1.86□□□□□ -2.11
RFC4-213ENST00000489028 TEAD3Q99594 435 aa1.86□□□□□ -2.11
RFC4-213ENST00000489028 UQCC2Q9BRT2 126 aa1.86□□□□□ -2.11
RFC4-213ENST00000489028 ZNF2Q9BSG1 426 aaPredicted RBP1.86□□□□□ -2.11
RFC4-213ENST00000489028 CHAC1Q9BUX1 264 aa1.86□□□□□ -2.11
RFC4-213ENST00000489028 SLIRPQ9GZT3 109 aaKnown RBP1.86□□□□□ -2.11
RFC4-213ENST00000489028 TOLLIPQ9H0E2 274 aa1.86□□□□□ -2.11
RFC4-213ENST00000489028 RPP21Q9H633 154 aaKnown RBP1.86□□□□□ -2.11
RFC4-213ENST00000489028 REEP1Q9H902 201 aa1.86□□□□□ -2.11
RFC4-213ENST00000489028 TMEM27Q9HBJ8 222 aa1.86□□□□□ -2.11
RFC4-213ENST00000489028 SLC40A1Q9NP59 571 aa1.86□□□□□ -2.11
RFC4-213ENST00000489028 RGS18Q9NS28 235 aa1.86□□□□□ -2.11
RFC4-213ENST00000489028 CHMP5Q9NZZ3 219 aa1.86□□□□□ -2.11
RFC4-213ENST00000489028 GGA2Q9UJY4 613 aa1.86□□□□□ -2.11
RFC4-213ENST00000489028 CES1P1Q9UKY3 287 aa1.86□□□□□ -2.11
RFC4-213ENST00000489028 CFAP45Q9UL16 551 aa1.86□□□□□ -2.11
RFC4-213ENST00000489028 V9GYY9 64 aa1.86□□□□□ -2.11
RFC4-213ENST00000489028 MN1Q10571 1320 aaPredicted RBP1.86□□□□□ -2.11
RFC4-213ENST00000489028 PALLDQ8WX93 1383 aa1.85□□□□□ -2.11
RFC4-213ENST00000489028 IGHV1-69DA0A0B4J2H0 117 aa1.85□□□□□ -2.11
RFC4-213ENST00000489028 A0A0J9YXV3 536 aa1.85□□□□□ -2.11
RFC4-213ENST00000489028 IGHV5-10-1A0A0J9YXX1 117 aa1.85□□□□□ -2.11
RFC4-213ENST00000489028 RAB19A4D1S5 217 aa1.85□□□□□ -2.11
RFC4-213ENST00000489028 H7C2Y5 167 aa1.85□□□□□ -2.11
RFC4-213ENST00000489028 K7ERQ8 282 aa1.85□□□□□ -2.11
RFC4-213ENST00000489028 PRMT5O14744 637 aaPredicted RBP1.85□□□□□ -2.11
RFC4-213ENST00000489028 RNF113AO15541 343 aaKnown RBP1.85□□□□□ -2.11
RFC4-213ENST00000489028 GMDSO60547 372 aa1.85□□□□□ -2.11
RFC4-213ENST00000489028 ENTPD5O75356 428 aa1.85□□□□□ -2.11
RFC4-213ENST00000489028 UPK1BO75841 260 aa1.85□□□□□ -2.11
RFC4-213ENST00000489028 PAHP00439 452 aa1.85□□□□□ -2.11
RFC4-213ENST00000489028 OXTP01178 125 aa1.85□□□□□ -2.11
RFC4-213ENST00000489028 IGLV3-19P01714 112 aa1.85□□□□□ -2.11
RFC4-213ENST00000489028 GABRG2P18507 467 aa1.85□□□□□ -2.11
RFC4-213ENST00000489028 BGNP21810 368 aa1.85□□□□□ -2.11
RFC4-213ENST00000489028 HTR2CP28335 458 aa1.85□□□□□ -2.11
RFC4-213ENST00000489028 TALDO1P37837 337 aa1.85□□□□□ -2.11
RFC4-213ENST00000489028 CDKN2DP55273 166 aa1.85□□□□□ -2.11
RFC4-213ENST00000489028 TAS2R46P59540 309 aa1.85□□□□□ -2.11
RFC4-213ENST00000489028 RPL18AQ02543 176 aaKnown RBP1.85□□□□□ -2.11
RFC4-213ENST00000489028 C2orf54Q08AI8 447 aa1.85□□□□□ -2.11
RFC4-213ENST00000489028 ST3GAL4Q11206 333 aa1.85□□□□□ -2.11
RFC4-213ENST00000489028 UBE2SQ16763 222 aa1.85□□□□□ -2.11
RFC4-213ENST00000489028 CPTPQ5TA50 214 aa1.85□□□□□ -2.11
RFC4-213ENST00000489028 DUPD1Q68J44 220 aa1.85□□□□□ -2.11
RFC4-213ENST00000489028 THOC7Q6I9Y2 204 aaKnown RBP1.85□□□□□ -2.11
RFC4-213ENST00000489028 OR2T5Q6IEZ7 315 aa1.85□□□□□ -2.11
RFC4-213ENST00000489028 DNAJC24Q6P3W2 148 aa1.85□□□□□ -2.11
RFC4-213ENST00000489028 CD300LGQ6UXG3 332 aa1.85□□□□□ -2.11
RFC4-213ENST00000489028 NCCRP1Q6ZVX7 275 aaPredicted RBP1.85□□□□□ -2.11
RFC4-213ENST00000489028 RAB43Q86YS6 212 aa1.85□□□□□ -2.11
RFC4-213ENST00000489028 NKAIN4Q8IVV8 208 aa1.85□□□□□ -2.11
RFC4-213ENST00000489028 TCAIMQ8N3R3 496 aa1.85□□□□□ -2.11
RFC4-213ENST00000489028 OTUD6BQ8N6M0 293 aa1.85□□□□□ -2.11
RFC4-213ENST00000489028 OR2T29Q8NH02 315 aa1.85□□□□□ -2.11
RFC4-213ENST00000489028 PIFOQ8TCI5 191 aa1.85□□□□□ -2.11
RFC4-213ENST00000489028 PHF10Q8WUB8 498 aaKnown RBP1.85□□□□□ -2.11
RFC4-213ENST00000489028 OR2A5Q96R48 311 aa1.85□□□□□ -2.11
RFC4-213ENST00000489028 CAMK2N2Q96S95 79 aa1.85□□□□□ -2.11
RFC4-213ENST00000489028 TIMM17AQ99595 171 aa1.85□□□□□ -2.11
RFC4-213ENST00000489028 TSNAXQ99598 290 aaKnown RBP1.85□□□□□ -2.11
RFC4-213ENST00000489028 HSD17B10Q99714 261 aaKnown RBP1.85□□□□□ -2.11
RFC4-213ENST00000489028 NAPGQ99747 312 aaPredicted RBP1.85□□□□□ -2.11
RFC4-213ENST00000489028 MAP1LC3CQ9BXW4 147 aa1.85□□□□□ -2.11
RFC4-213ENST00000489028 ANKHQ9HCJ1 492 aa1.85□□□□□ -2.11
RFC4-213ENST00000489028 CSNK1G1Q9HCP0 422 aa1.85□□□□□ -2.11
RFC4-213ENST00000489028 C6orf50Q9HD87 102 aa1.85□□□□□ -2.11
RFC4-213ENST00000489028 HMG20AQ9NP66 347 aa1.85□□□□□ -2.11
RFC4-213ENST00000489028 SIRT7Q9NRC8 400 aa1.85□□□□□ -2.11
RFC4-213ENST00000489028 DDX19AQ9NUU7 478 aaKnown RBP1.85□□□□□ -2.11
RFC4-213ENST00000489028 SLC17A7Q9P2U7 560 aa1.85□□□□□ -2.11
RFC4-213ENST00000489028 HES2Q9Y543 173 aa1.85□□□□□ -2.11
RFC4-213ENST00000489028 MUC19Q7Z5P9 8384 aa1.84□□□□□ -2.11
RFC4-213ENST00000489028 TRAV19A0A0A6YYK7 116 aa1.84□□□□□ -2.11
RFC4-213ENST00000489028 A0A0B4J2E0 115 aa1.84□□□□□ -2.11
RFC4-213ENST00000489028 A0A1W2PP18 115 aa1.84□□□□□ -2.11
RFC4-213ENST00000489028 SEC14L6B5MCN3 397 aa1.84□□□□□ -2.11
RFC4-213ENST00000489028 HSBP1L1C9JCN9 74 aa1.84□□□□□ -2.11
RFC4-213ENST00000489028 DNASE2O00115 360 aaPredicted RBP1.84□□□□□ -2.11
RFC4-213ENST00000489028 TAAR5O14804 337 aa1.84□□□□□ -2.11
RFC4-213ENST00000489028 GATCO43716 136 aaKnown RBP1.84□□□□□ -2.11
RFC4-213ENST00000489028 NMT2O60551 498 aa1.84□□□□□ -2.11
RFC4-213ENST00000489028 CTNSO60931 367 aa1.84□□□□□ -2.11
RFC4-213ENST00000489028 RP2O75695 350 aa1.84□□□□□ -2.11
RFC4-213ENST00000489028 TRAPPC6AO75865 159 aa1.84□□□□□ -2.11
RFC4-213ENST00000489028 SLC22A5O76082 557 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms