RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 UTS2BQ765I0 119 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 BIVMQ86UB2 503 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 GABRG1Q8N1C3 465 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 NANOS1Q8WY41 292 aaKnown RBP8.2□□□□□ -1.1
SF3B1-211ENST00000487698 PP6455Q8WZ26 134 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 STARD4Q96DR4 205 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 COX4I2Q96KJ9 171 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 POM121L2Q96KW2 1035 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 KCNK15Q9H427 330 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 CNTD2Q9H8S5 307 aa8.2□□□□□ -1.1
SF3B1-211ENST00000487698 TMEM272A0A1B0GTI8 110 aa8.19□□□□□ -1.1
SF3B1-211ENST00000487698 MAGEB3O15480 346 aa8.19□□□□□ -1.1
SF3B1-211ENST00000487698 XRCC2O43543 280 aa8.19□□□□□ -1.1
SF3B1-211ENST00000487698 TPPPO94811 219 aa8.19□□□□□ -1.1
SF3B1-211ENST00000487698 ALDOBP05062 364 aa8.19□□□□□ -1.1
SF3B1-211ENST00000487698 OCMP0CE72 109 aaPredicted RBP8.19□□□□□ -1.1
SF3B1-211ENST00000487698 PRF1P14222 555 aa8.19□□□□□ -1.1
SF3B1-211ENST00000487698 PTH2RP49190 550 aa8.19□□□□□ -1.1
SF3B1-211ENST00000487698 MMP15P51511 669 aa8.19□□□□□ -1.1
SF3B1-211ENST00000487698 CAPZA1P52907 286 aa8.19□□□□□ -1.1
SF3B1-211ENST00000487698 GABRA6Q16445 453 aa8.19□□□□□ -1.1
SF3B1-211ENST00000487698 CRIP3Q6Q6R5 217 aa8.19□□□□□ -1.1
SF3B1-211ENST00000487698 RPRMLQ8N4K4 120 aa8.19□□□□□ -1.1
SF3B1-211ENST00000487698 NAXEQ8NCW5 288 aa8.19□□□□□ -1.1
SF3B1-211ENST00000487698 C1orf162Q8NEQ5 155 aaPredicted RBP8.19□□□□□ -1.1
SF3B1-211ENST00000487698 S100A16Q96FQ6 103 aaKnown RBP8.19□□□□□ -1.1
SF3B1-211ENST00000487698 ZFP3Q96NJ6 502 aa8.19□□□□□ -1.1
SF3B1-211ENST00000487698 PIGLQ9Y2B2 252 aa8.19□□□□□ -1.1
SF3B1-211ENST00000487698 C5orf49A4QMS7 147 aa8.18□□□□□ -1.1
SF3B1-211ENST00000487698 C1QTNF9BB2RNN3 333 aa8.18□□□□□ -1.1
SF3B1-211ENST00000487698 PLA2G10O15496 165 aa8.18□□□□□ -1.1
SF3B1-211ENST00000487698 GSTZ1O43708 216 aaPredicted RBP8.18□□□□□ -1.1
SF3B1-211ENST00000487698 SSX4O60224 188 aa8.18□□□□□ -1.1
SF3B1-211ENST00000487698 CTAG2O75638 210 aa8.18□□□□□ -1.1
SF3B1-211ENST00000487698 RAD51DO75771 328 aa8.18□□□□□ -1.1
SF3B1-211ENST00000487698 LYZL6O75951 148 aa8.18□□□□□ -1.1
SF3B1-211ENST00000487698 C1QTNF9P0C862 333 aa8.18□□□□□ -1.1
SF3B1-211ENST00000487698 TMIGD3P0DMS9 266 aaPredicted RBP8.18□□□□□ -1.1
SF3B1-211ENST00000487698 ARSBP15848 533 aa8.18□□□□□ -1.1
SF3B1-211ENST00000487698 CDK2P24941 298 aa8.18□□□□□ -1.1
SF3B1-211ENST00000487698 TIMP3P35625 211 aa8.18□□□□□ -1.1
SF3B1-211ENST00000487698 RFX2P48378 723 aa8.18□□□□□ -1.1
SF3B1-211ENST00000487698 FAM3AP98173 230 aa8.18□□□□□ -1.1
SF3B1-211ENST00000487698 PITPNAQ00169 270 aa8.18□□□□□ -1.1
SF3B1-211ENST00000487698 ZNF92Q03936 586 aa8.18□□□□□ -1.1
SF3B1-211ENST00000487698 PLP2Q04941 152 aa8.18□□□□□ -1.1
SF3B1-211ENST00000487698 TAB1Q15750 504 aa8.18□□□□□ -1.1
SF3B1-211ENST00000487698 TRIQKQ629K1 86 aa8.18□□□□□ -1.1
SF3B1-211ENST00000487698 TMEM42Q69YG0 159 aa8.18□□□□□ -1.1
SF3B1-211ENST00000487698 GDPD3Q7L5L3 318 aa8.18□□□□□ -1.1
SF3B1-211ENST00000487698 RNF144BQ7Z419 303 aa8.18□□□□□ -1.1
SF3B1-211ENST00000487698 MDP1Q86V88 176 aa8.18□□□□□ -1.1
SF3B1-211ENST00000487698 CCDC36Q8IYA8 594 aa8.18□□□□□ -1.1
SF3B1-211ENST00000487698 IZUMO1Q8IYV9 350 aa8.18□□□□□ -1.1
SF3B1-211ENST00000487698 CISD2Q8N5K1 135 aaKnown RBP8.18□□□□□ -1.1
SF3B1-211ENST00000487698 SEMA6DQ8NFY4 1073 aa8.18□□□□□ -1.1
SF3B1-211ENST00000487698 PTX4Q96A99 478 aa8.18□□□□□ -1.1
SF3B1-211ENST00000487698 FAIMQ9NVQ4 179 aa8.18□□□□□ -1.1
SF3B1-211ENST00000487698 hCG_2014768A0A024R1R8 64 aa8.18□□□□□ -1.1
SF3B1-211ENST00000487698 CIB4A0PJX0 185 aa8.18□□□□□ -1.1
SF3B1-211ENST00000487698 LANCL1O43813 399 aa8.18□□□□□ -1.1
SF3B1-211ENST00000487698 BPNT1O95861 308 aa8.18□□□□□ -1.1
SF3B1-211ENST00000487698 SERPINA5P05154 406 aa8.18□□□□□ -1.1
SF3B1-211ENST00000487698 HOXD4P09016 255 aaPredicted RBP8.18□□□□□ -1.1
SF3B1-211ENST00000487698 CCL2P13500 99 aa8.18□□□□□ -1.1
SF3B1-211ENST00000487698 HOXB1P14653 301 aaPredicted RBP8.18□□□□□ -1.1
SF3B1-211ENST00000487698 SPNP16150 400 aa8.18□□□□□ -1.1
SF3B1-211ENST00000487698 ZNF14P17017 642 aaPredicted RBP8.18□□□□□ -1.1
SF3B1-211ENST00000487698 ZNF93P35789 620 aaPredicted RBP8.18□□□□□ -1.1
SF3B1-211ENST00000487698 MAP2K3P46734 347 aa8.18□□□□□ -1.1
SF3B1-211ENST00000487698 GSK3AP49840 483 aa8.18□□□□□ -1.1
SF3B1-211ENST00000487698 PER3P56645 1201 aa8.18□□□□□ -1.1
SF3B1-211ENST00000487698 QRFPP83859 136 aa8.18□□□□□ -1.1
SF3B1-211ENST00000487698 DGCR2P98153 550 aa8.18□□□□□ -1.1
SF3B1-211ENST00000487698 UBE2V2Q15819 145 aa8.18□□□□□ -1.1
SF3B1-211ENST00000487698 TMEM69Q5SWH9 247 aa8.18□□□□□ -1.1
SF3B1-211ENST00000487698 SMIM4Q8WVI0 70 aa8.18□□□□□ -1.1
SF3B1-211ENST00000487698 AKAP1Q92667 903 aaKnown RBP eCLIP8.18□□□□□ -1.1
SF3B1-211ENST00000487698 YIPF5Q969M3 257 aa8.18□□□□□ -1.1
SF3B1-211ENST00000487698 RFT1Q96AA3 541 aa8.18□□□□□ -1.1
SF3B1-211ENST00000487698 APOBEC3DQ96AK3 386 aaPredicted RBP8.18□□□□□ -1.1
SF3B1-211ENST00000487698 MS4A3Q96HJ5 214 aa8.18□□□□□ -1.1
SF3B1-211ENST00000487698 C1orf147Q96MC9 270 aaPredicted RBP8.18□□□□□ -1.1
SF3B1-211ENST00000487698 THAP7Q9BT49 309 aaPredicted RBP8.18□□□□□ -1.1
SF3B1-211ENST00000487698 FBLN5Q9UBX5 448 aa8.18□□□□□ -1.1
SF3B1-211ENST00000487698 PROCRQ9UNN8 238 aa8.18□□□□□ -1.1
SF3B1-211ENST00000487698 DSPP15924 2871 aaKnown RBP8.18□□□□□ -1.1
SF3B1-211ENST00000487698 SPTA1P02549 2419 aa8.18□□□□□ -1.1
SF3B1-211ENST00000487698 PRR14LQ5THK1 2151 aa8.17□□□□□ -1.1
SF3B1-211ENST00000487698 ZZEF1O43149 2961 aa8.17□□□□□ -1.1
SF3B1-211ENST00000487698 EEF1E1O43324 174 aaKnown RBP8.17□□□□□ -1.1
SF3B1-211ENST00000487698 XRCC3O43542 346 aa8.17□□□□□ -1.1
SF3B1-211ENST00000487698 RAB6AP20340 208 aa8.17□□□□□ -1.1
SF3B1-211ENST00000487698 CEACAM8P31997 349 aaPredicted RBP8.17□□□□□ -1.1
SF3B1-211ENST00000487698 WNT5AP41221 380 aa8.17□□□□□ -1.1
SF3B1-211ENST00000487698 TAS2R20P59543 309 aa8.17□□□□□ -1.1
SF3B1-211ENST00000487698 RIPPLY1Q0D2K3 151 aa8.17□□□□□ -1.1
SF3B1-211ENST00000487698 UNC119Q13432 240 aa8.17□□□□□ -1.1
SF3B1-211ENST00000487698 HACD4Q5VWC8 232 aa8.17□□□□□ -1.1
SF3B1-211ENST00000487698 DNM1P46Q6ZS02 220 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms