RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 Q96M85 177 aa12.06□□□□□ -0.48
U2AF1-211ENST00000486519 VAPAQ9P0L0 249 aa12.06□□□□□ -0.48
U2AF1-211ENST00000486519 F5H5K5 113 aa12.05□□□□□ -0.48
U2AF1-211ENST00000486519 M0QX08 132 aa12.05□□□□□ -0.48
U2AF1-211ENST00000486519 SERPINB7O75635 380 aa12.05□□□□□ -0.48
U2AF1-211ENST00000486519 LCATP04180 440 aa12.05□□□□□ -0.48
U2AF1-211ENST00000486519 POLR2JP52435 117 aaKnown RBP12.05□□□□□ -0.48
U2AF1-211ENST00000486519 RAB25P57735 213 aa12.05□□□□□ -0.48
U2AF1-211ENST00000486519 LSM6P62312 80 aaKnown RBP12.05□□□□□ -0.48
U2AF1-211ENST00000486519 ZNF782Q6ZMW2 699 aaPredicted RBP12.05□□□□□ -0.48
U2AF1-211ENST00000486519 MSANTD1Q6ZTZ1 278 aa12.05□□□□□ -0.48
U2AF1-211ENST00000486519 ZNF329Q86UD4 541 aa12.05□□□□□ -0.48
U2AF1-211ENST00000486519 OR51A7Q8NH64 312 aa12.05□□□□□ -0.48
U2AF1-211ENST00000486519 TMEM239Q8WW34 195 aa12.05□□□□□ -0.48
U2AF1-211ENST00000486519 ISOC1Q96CN7 298 aa12.05□□□□□ -0.48
U2AF1-211ENST00000486519 TMEM38AQ9H6F2 299 aa12.05□□□□□ -0.48
U2AF1-211ENST00000486519 RNPEPL1Q9HAU8 725 aa12.05□□□□□ -0.48
U2AF1-211ENST00000486519 ZMAT5Q9UDW3 170 aaKnown RBP12.05□□□□□ -0.48
U2AF1-211ENST00000486519 A6NIZ1 184 aa12.04□□□□□ -0.48
U2AF1-211ENST00000486519 CCL3L1P16619 93 aa12.04□□□□□ -0.48
U2AF1-211ENST00000486519 CD24P25063 80 aa12.04□□□□□ -0.48
U2AF1-211ENST00000486519 MYCNOSP40205 109 aa12.04□□□□□ -0.48
U2AF1-211ENST00000486519 SLC1A6P48664 564 aa12.04□□□□□ -0.48
U2AF1-211ENST00000486519 CRYBA2P53672 197 aa12.04□□□□□ -0.48
U2AF1-211ENST00000486519 LGALS4P56470 323 aa12.04□□□□□ -0.48
U2AF1-211ENST00000486519 RAP1BP61224 184 aa12.04□□□□□ -0.48
U2AF1-211ENST00000486519 RAP1AP62834 184 aa12.04□□□□□ -0.48
U2AF1-211ENST00000486519 MXRA7P84157 204 aa12.04□□□□□ -0.48
U2AF1-211ENST00000486519 MAVSQ7Z434 540 aa12.04□□□□□ -0.48
U2AF1-211ENST00000486519 ZNRF1Q8ND25 227 aa12.04□□□□□ -0.48
U2AF1-211ENST00000486519 OR56B2PQ8NGI1 322 aa12.04□□□□□ -0.48
U2AF1-211ENST00000486519 TAMM41Q96BW9 452 aa12.04□□□□□ -0.48
U2AF1-211ENST00000486519 RAX2Q96IS3 184 aa12.04□□□□□ -0.48
U2AF1-211ENST00000486519 SLC22A4Q9H015 551 aa12.04□□□□□ -0.48
U2AF1-211ENST00000486519 HDHD2Q9H0R4 259 aa12.04□□□□□ -0.48
U2AF1-211ENST00000486519 ABCB10Q9NRK6 738 aa12.04□□□□□ -0.48
U2AF1-211ENST00000486519 HAO2Q9NYQ3 351 aa12.04□□□□□ -0.48
U2AF1-211ENST00000486519 HAO1Q9UJM8 370 aa12.04□□□□□ -0.48
U2AF1-211ENST00000486519 ZNF256Q9Y2P7 627 aaPredicted RBP12.04□□□□□ -0.48
U2AF1-211ENST00000486519 SORL1Q92673 2214 aa12.04□□□□□ -0.48
U2AF1-211ENST00000486519 TRBV5-3A0A0A0MS03 114 aa12.03□□□□□ -0.48
U2AF1-211ENST00000486519 TLDC2A0PJX2 215 aa12.03□□□□□ -0.48
U2AF1-211ENST00000486519 GGT3PA6NGU5 568 aa12.03□□□□□ -0.48
U2AF1-211ENST00000486519 SIGLEC5O15389 551 aa12.03□□□□□ -0.48
U2AF1-211ENST00000486519 SLC16A7O60669 478 aa12.03□□□□□ -0.48
U2AF1-211ENST00000486519 AMY1AP04745 511 aa12.03□□□□□ -0.48
U2AF1-211ENST00000486519 AMY2AP04746 511 aa12.03□□□□□ -0.48
U2AF1-211ENST00000486519 PAICSP22234 425 aaKnown RBP12.03□□□□□ -0.48
U2AF1-211ENST00000486519 CAV3P56539 151 aa12.03□□□□□ -0.48
U2AF1-211ENST00000486519 ABCA11PQ4W5N1 156 aa12.03□□□□□ -0.48
U2AF1-211ENST00000486519 GLYATL3Q5SZD4 288 aa12.03□□□□□ -0.48
U2AF1-211ENST00000486519 EGFL6Q8IUX8 553 aa12.03□□□□□ -0.48
U2AF1-211ENST00000486519 LINC00346Q8IVM7 164 aa12.03□□□□□ -0.48
U2AF1-211ENST00000486519 GOLGA6L1Q8N7Z2 621 aa12.03□□□□□ -0.48
U2AF1-211ENST00000486519 KLHL30-AS1Q8NEE0 82 aa12.03□□□□□ -0.48
U2AF1-211ENST00000486519 OR1M1Q8NGA1 313 aa12.03□□□□□ -0.48
U2AF1-211ENST00000486519 OR13C2Q8NGS9 318 aa12.03□□□□□ -0.48
U2AF1-211ENST00000486519 ANGPTL6Q8NI99 470 aa12.03□□□□□ -0.48
U2AF1-211ENST00000486519 BCAS4Q8TDM0 211 aa12.03□□□□□ -0.48
U2AF1-211ENST00000486519 UBLCP1Q8WVY7 318 aaPredicted RBP12.03□□□□□ -0.48
U2AF1-211ENST00000486519 C12orf43Q96C57 262 aaKnown RBP12.03□□□□□ -0.48
U2AF1-211ENST00000486519 RAB3IPQ96QF0 476 aaPredicted RBP12.03□□□□□ -0.48
U2AF1-211ENST00000486519 PNRC2Q9NPJ4 139 aaKnown RBP12.03□□□□□ -0.48
U2AF1-211ENST00000486519 PITPNC1Q9UKF7 332 aa12.03□□□□□ -0.48
U2AF1-211ENST00000486519 POLR1DQ9Y2S0 133 aa12.03□□□□□ -0.48
U2AF1-211ENST00000486519 PRSS37A4D1T9 235 aa12.02□□□□□ -0.49
U2AF1-211ENST00000486519 ODF3BA8MYP8 253 aa12.02□□□□□ -0.49
U2AF1-211ENST00000486519 DCTN6O00399 190 aa12.02□□□□□ -0.49
U2AF1-211ENST00000486519 CDIPTO14735 213 aa12.02□□□□□ -0.49
U2AF1-211ENST00000486519 LY86O95711 162 aa12.02□□□□□ -0.49
U2AF1-211ENST00000486519 SDHAP31040 664 aa12.02□□□□□ -0.49
U2AF1-211ENST00000486519 GGT2P36268 569 aa12.02□□□□□ -0.49
U2AF1-211ENST00000486519 RBM34P42696 430 aaKnown RBP12.02□□□□□ -0.49
U2AF1-211ENST00000486519 WDR4P57081 412 aaKnown RBP12.02□□□□□ -0.49
U2AF1-211ENST00000486519 MALLQ13021 153 aa12.02□□□□□ -0.49
U2AF1-211ENST00000486519 PIN1Q13526 163 aaPredicted RBP12.02□□□□□ -0.49
U2AF1-211ENST00000486519 DEFB136Q30KP8 78 aa12.02□□□□□ -0.49
U2AF1-211ENST00000486519 PAGE3Q5JUK9 113 aa12.02□□□□□ -0.49
U2AF1-211ENST00000486519 LRIF1Q5T3J3 769 aa12.02□□□□□ -0.49
U2AF1-211ENST00000486519 DPY19L4Q7Z388 723 aa12.02□□□□□ -0.49
U2AF1-211ENST00000486519 GLB1L2Q8IW92 636 aa12.02□□□□□ -0.49
U2AF1-211ENST00000486519 DDB2Q92466 427 aa12.02□□□□□ -0.49
U2AF1-211ENST00000486519 TSSK2Q96PF2 358 aa12.02□□□□□ -0.49
U2AF1-211ENST00000486519 TM2D3Q9BRN9 247 aa12.02□□□□□ -0.49
U2AF1-211ENST00000486519 SYT4Q9H2B2 425 aa12.02□□□□□ -0.49
U2AF1-211ENST00000486519 ZMAT4Q9H898 229 aa12.02□□□□□ -0.49
U2AF1-211ENST00000486519 HEXA-AS1Q9H8Q6 139 aa12.02□□□□□ -0.49
U2AF1-211ENST00000486519 SDR39U1Q9NRG7 319 aaPredicted RBP12.02□□□□□ -0.49
U2AF1-211ENST00000486519 MRPL15Q9P015 296 aaKnown RBP12.02□□□□□ -0.49
U2AF1-211ENST00000486519 NUDT19A8MXV4 375 aa12.01□□□□□ -0.49
U2AF1-211ENST00000486519 BHLHE40O14503 412 aa12.01□□□□□ -0.49
U2AF1-211ENST00000486519 POLR3GO15318 223 aaPredicted RBP12.01□□□□□ -0.49
U2AF1-211ENST00000486519 ARG1P05089 322 aa12.01□□□□□ -0.49
U2AF1-211ENST00000486519 ACAA1P09110 424 aaPredicted RBP12.01□□□□□ -0.49
U2AF1-211ENST00000486519 IFI30P13284 250 aa12.01□□□□□ -0.49
U2AF1-211ENST00000486519 VEGFCP49767 419 aa12.01□□□□□ -0.49
U2AF1-211ENST00000486519 TRAP1Q12931 704 aaKnown RBP12.01□□□□□ -0.49
U2AF1-211ENST00000486519 KCNMB1Q16558 191 aa12.01□□□□□ -0.49
U2AF1-211ENST00000486519 FAM122BQ7Z309 247 aa12.01□□□□□ -0.49
U2AF1-211ENST00000486519 OSR2Q8N2R0 312 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms