RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 DHHO43323 396 aa9.89□□□□□ -0.83
HDAC6-228ENST00000486227 PLPP2O43688 288 aa9.89□□□□□ -0.83
HDAC6-228ENST00000486227 GCM2O75603 506 aaPredicted RBP9.89□□□□□ -0.83
HDAC6-228ENST00000486227 MEOX2P50222 304 aa9.89□□□□□ -0.83
HDAC6-228ENST00000486227 RAB13P51153 203 aa9.89□□□□□ -0.83
HDAC6-228ENST00000486227 FOXL2P58012 376 aa9.89□□□□□ -0.83
HDAC6-228ENST00000486227 FUT7Q11130 342 aa9.89□□□□□ -0.83
HDAC6-228ENST00000486227 CLN3Q13286 438 aa9.89□□□□□ -0.83
HDAC6-228ENST00000486227 IKZF1Q13422 519 aa9.89□□□□□ -0.83
HDAC6-228ENST00000486227 ADAM5Q6NVV9 412 aa9.89□□□□□ -0.83
HDAC6-228ENST00000486227 WDR88Q6ZMY6 472 aa9.89□□□□□ -0.83
HDAC6-228ENST00000486227 OR52B4Q8NGK2 314 aa9.89□□□□□ -0.83
HDAC6-228ENST00000486227 TERB2Q8NHR7 220 aa9.89□□□□□ -0.83
HDAC6-228ENST00000486227 TMED6Q8WW62 240 aa9.89□□□□□ -0.83
HDAC6-228ENST00000486227 R4GMQ9 66 aa9.89□□□□□ -0.83
HDAC6-228ENST00000486227 LRRC30A6NM36 301 aa9.89□□□□□ -0.83
HDAC6-228ENST00000486227 PYCARD-AS1I3L0S3 204 aa9.89□□□□□ -0.83
HDAC6-228ENST00000486227 SLC34A2O95436 690 aa9.89□□□□□ -0.83
HDAC6-228ENST00000486227 EFEMP2O95967 443 aa9.89□□□□□ -0.83
HDAC6-228ENST00000486227 CT45A8P0DMV1 189 aa9.89□□□□□ -0.83
HDAC6-228ENST00000486227 CT45A9P0DMV2 189 aa9.89□□□□□ -0.83
HDAC6-228ENST00000486227 EPHA1P21709 976 aa9.89□□□□□ -0.83
HDAC6-228ENST00000486227 IL2RGP31785 369 aa9.89□□□□□ -0.83
HDAC6-228ENST00000486227 SLC37A1P57057 533 aa9.89□□□□□ -0.83
HDAC6-228ENST00000486227 TAS2R46P59540 309 aa9.89□□□□□ -0.83
HDAC6-228ENST00000486227 CT45A2Q5DJT8 189 aa9.89□□□□□ -0.83
HDAC6-228ENST00000486227 JMJD6Q6NYC1 403 aaPredicted RBP9.89□□□□□ -0.83
HDAC6-228ENST00000486227 BAP18Q8IXM2 172 aa9.89□□□□□ -0.83
HDAC6-228ENST00000486227 BATF2Q8N1L9 274 aa9.89□□□□□ -0.83
HDAC6-228ENST00000486227 GALNT16Q8N428 558 aa9.89□□□□□ -0.83
HDAC6-228ENST00000486227 OTOSQ8NHW6 89 aa9.89□□□□□ -0.83
HDAC6-228ENST00000486227 LURAP1Q96LR2 239 aa9.89□□□□□ -0.83
HDAC6-228ENST00000486227 JAM3Q9BX67 310 aa9.89□□□□□ -0.83
HDAC6-228ENST00000486227 ZNF286AQ9HBT8 521 aa9.89□□□□□ -0.83
HDAC6-228ENST00000486227 GPR173Q9NS66 373 aa9.89□□□□□ -0.83
HDAC6-228ENST00000486227 GDF2Q9UK05 429 aaPredicted RBP9.89□□□□□ -0.83
HDAC6-228ENST00000486227 LSM2Q9Y333 95 aaKnown RBP9.89□□□□□ -0.83
HDAC6-228ENST00000486227 TRPM7Q96QT4 1865 aa9.89□□□□□ -0.83
HDAC6-228ENST00000486227 CEP250Q9BV73 2442 aa9.89□□□□□ -0.83
HDAC6-228ENST00000486227 CCDC88CQ9P219 2028 aa9.88□□□□□ -0.83
HDAC6-228ENST00000486227 A0A096LPE4 126 aa9.88□□□□□ -0.83
HDAC6-228ENST00000486227 LOC105371267A0A1B0GV96 52 aa9.88□□□□□ -0.83
HDAC6-228ENST00000486227 A0A1W2PPZ6 126 aa9.88□□□□□ -0.83
HDAC6-228ENST00000486227 OR4E1P0C645 316 aa9.88□□□□□ -0.83
HDAC6-228ENST00000486227 CPN1P15169 458 aa9.88□□□□□ -0.83
HDAC6-228ENST00000486227 RPS18P62269 152 aaKnown RBP9.88□□□□□ -0.83
HDAC6-228ENST00000486227 WIPI1Q5MNZ9 446 aaPredicted RBP9.88□□□□□ -0.83
HDAC6-228ENST00000486227 SEMA6DQ8NFY4 1073 aa9.88□□□□□ -0.83
HDAC6-228ENST00000486227 OR52H1Q8NGJ2 320 aa9.88□□□□□ -0.83
HDAC6-228ENST00000486227 OR4C16Q8NGL9 310 aa9.88□□□□□ -0.83
HDAC6-228ENST00000486227 PTPMT1Q8WUK0 201 aaPredicted RBP9.88□□□□□ -0.83
HDAC6-228ENST00000486227 TM4SF19Q96DZ7 209 aa9.88□□□□□ -0.83
HDAC6-228ENST00000486227 CXorf58Q96LI9 332 aa9.88□□□□□ -0.83
HDAC6-228ENST00000486227 CRLF2Q9HC73 371 aa9.88□□□□□ -0.83
HDAC6-228ENST00000486227 EP400Q96L91 3159 aa9.88□□□□□ -0.83
HDAC6-228ENST00000486227 TMEM235A6NFC5 223 aa9.88□□□□□ -0.83
HDAC6-228ENST00000486227 SELENOPP49908 381 aa9.88□□□□□ -0.83
HDAC6-228ENST00000486227 SLC25A1P53007 311 aa9.88□□□□□ -0.83
HDAC6-228ENST00000486227 DGAT2L6Q6ZPD8 337 aa9.88□□□□□ -0.83
HDAC6-228ENST00000486227 MDGA2Q7Z553 956 aa9.88□□□□□ -0.83
HDAC6-228ENST00000486227 NAA40Q86UY6 237 aa9.88□□□□□ -0.83
HDAC6-228ENST00000486227 WFDC8Q8IUA0 241 aa9.88□□□□□ -0.83
HDAC6-228ENST00000486227 SKA3Q8IX90 412 aa9.88□□□□□ -0.83
HDAC6-228ENST00000486227 ZNF561Q8N587 486 aa9.88□□□□□ -0.83
HDAC6-228ENST00000486227 APOBEC4Q8WW27 367 aaKnown RBP9.88□□□□□ -0.83
HDAC6-228ENST00000486227 TRMT61AQ96FX7 289 aaKnown RBP9.88□□□□□ -0.83
HDAC6-228ENST00000486227 OR8B4Q96RC9 309 aa9.88□□□□□ -0.83
HDAC6-228ENST00000486227 C1QTNF6Q9BXI9 259 aa9.88□□□□□ -0.83
HDAC6-228ENST00000486227 ADGRL4Q9HBW9 690 aa9.88□□□□□ -0.83
HDAC6-228ENST00000486227 PILRAQ9UKJ1 303 aa9.88□□□□□ -0.83
HDAC6-228ENST00000486227 DOCK6Q96HP0 2047 aa9.88□□□□□ -0.83
HDAC6-228ENST00000486227 ABCA7Q8IZY2 2146 aa9.88□□□□□ -0.83
HDAC6-228ENST00000486227 hCG_1809904A0A1W2PP81 198 aa9.88□□□□□ -0.83
HDAC6-228ENST00000486227 A0A1W2PPE2 198 aa9.88□□□□□ -0.83
HDAC6-228ENST00000486227 A0A1W2PR64 198 aa9.88□□□□□ -0.83
HDAC6-228ENST00000486227 A0A1W2PRV1 198 aa9.88□□□□□ -0.83
HDAC6-228ENST00000486227 ZNF98A6NK75 572 aa9.88□□□□□ -0.83
HDAC6-228ENST00000486227 C4orf51C9J302 202 aa9.88□□□□□ -0.83
HDAC6-228ENST00000486227 TK1P04183 234 aa9.88□□□□□ -0.83
HDAC6-228ENST00000486227 GABRA1P14867 456 aa9.88□□□□□ -0.83
HDAC6-228ENST00000486227 DSCR4P56555 118 aaPredicted RBP9.88□□□□□ -0.83
HDAC6-228ENST00000486227 ERVK-16P61578 105 aa9.88□□□□□ -0.83
HDAC6-228ENST00000486227 EIF2S3LQ2VIR3 472 aaKnown RBP9.88□□□□□ -0.83
HDAC6-228ENST00000486227 SOHLH1Q5JUK2 328 aa9.88□□□□□ -0.83
HDAC6-228ENST00000486227 OR2A2Q6IF42 318 aa9.88□□□□□ -0.83
HDAC6-228ENST00000486227 TRILQ7L0X0 811 aa9.88□□□□□ -0.83
HDAC6-228ENST00000486227 MRPL41Q8IXM3 137 aaKnown RBP9.88□□□□□ -0.83
HDAC6-228ENST00000486227 KCNRGQ8N5I3 272 aa9.88□□□□□ -0.83
HDAC6-228ENST00000486227 BPIFCQ8NFQ6 507 aa9.88□□□□□ -0.83
HDAC6-228ENST00000486227 OR4D10Q8NGI6 311 aa9.88□□□□□ -0.83
HDAC6-228ENST00000486227 TIMD4Q96H15 378 aa9.88□□□□□ -0.83
HDAC6-228ENST00000486227 PBOV1Q9GZY1 135 aa9.88□□□□□ -0.83
HDAC6-228ENST00000486227 UCK1Q9HA47 277 aa9.88□□□□□ -0.83
HDAC6-228ENST00000486227 LANCL2Q9NS86 450 aa9.88□□□□□ -0.83
HDAC6-228ENST00000486227 B3GAT1Q9P2W7 334 aa9.88□□□□□ -0.83
HDAC6-228ENST00000486227 ZNF236Q9UL36 1845 aa9.88□□□□□ -0.83
HDAC6-228ENST00000486227 TRAV20A0A0B4J274 112 aa9.88□□□□□ -0.83
HDAC6-228ENST00000486227 BPNT1O95861 308 aa9.88□□□□□ -0.83
HDAC6-228ENST00000486227 PMP2P02689 132 aa9.88□□□□□ -0.83
HDAC6-228ENST00000486227 IDH3GP51553 393 aaPredicted RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms