RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 COPEO14579 308 aa6.51□□□□□ -1.37
XRN1-212ENST00000486211 RER1O15258 196 aa6.51□□□□□ -1.37
XRN1-212ENST00000486211 POLR3GO15318 223 aaPredicted RBP6.51□□□□□ -1.37
XRN1-212ENST00000486211 GMDSO60547 372 aa6.51□□□□□ -1.37
XRN1-212ENST00000486211 RHBDL1O75783 438 aa6.51□□□□□ -1.37
XRN1-212ENST00000486211 OR7A10O76100 309 aa6.51□□□□□ -1.37
XRN1-212ENST00000486211 LPLP06858 475 aa6.51□□□□□ -1.37
XRN1-212ENST00000486211 GRPP07492 148 aa6.51□□□□□ -1.37
XRN1-212ENST00000486211 HCKP08631 526 aa6.51□□□□□ -1.37
XRN1-212ENST00000486211 FUT1P19526 365 aa6.51□□□□□ -1.37
XRN1-212ENST00000486211 COX7A1P24310 79 aa6.51□□□□□ -1.37
XRN1-212ENST00000486211 CAV3P56539 151 aa6.51□□□□□ -1.37
XRN1-212ENST00000486211 RPL27P61353 136 aaKnown RBP6.51□□□□□ -1.37
XRN1-212ENST00000486211 TOP3AQ13472 1001 aaPredicted RBP6.51□□□□□ -1.37
XRN1-212ENST00000486211 SELPLGQ14242 412 aa6.51□□□□□ -1.37
XRN1-212ENST00000486211 KRTAP27-1Q3LI81 207 aa6.51□□□□□ -1.37
XRN1-212ENST00000486211 ENTPD8Q5MY95 495 aa6.51□□□□□ -1.37
XRN1-212ENST00000486211 ZNF788Q6ZQV5 615 aa6.51□□□□□ -1.37
XRN1-212ENST00000486211 ZNF572Q7Z3I7 529 aaPredicted RBP6.51□□□□□ -1.37
XRN1-212ENST00000486211 WDR86Q86TI4 376 aa6.51□□□□□ -1.37
XRN1-212ENST00000486211 OSR2Q8N2R0 312 aa6.51□□□□□ -1.37
XRN1-212ENST00000486211 OR5T2Q8NGG2 359 aa6.51□□□□□ -1.37
XRN1-212ENST00000486211 OR9Q1Q8NGQ5 310 aa6.51□□□□□ -1.37
XRN1-212ENST00000486211 NFKBIDQ8NI38 313 aa6.51□□□□□ -1.37
XRN1-212ENST00000486211 GAFA1Q96PS6 74 aa6.51□□□□□ -1.37
XRN1-212ENST00000486211 PRSS27Q9BQR3 290 aa6.51□□□□□ -1.37
XRN1-212ENST00000486211 KRTAP4-5Q9BYR2 181 aa6.51□□□□□ -1.37
XRN1-212ENST00000486211 RAD21L1Q9H4I0 556 aa6.51□□□□□ -1.37
XRN1-212ENST00000486211 RNPEPL1Q9HAU8 725 aa6.51□□□□□ -1.37
XRN1-212ENST00000486211 ELL3Q9HB65 397 aaPredicted RBP6.51□□□□□ -1.37
XRN1-212ENST00000486211 ABCB10Q9NRK6 738 aa6.51□□□□□ -1.37
XRN1-212ENST00000486211 VNN3Q9NY84 501 aa6.51□□□□□ -1.37
XRN1-212ENST00000486211 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.51□□□□□ -1.37
XRN1-212ENST00000486211 SLC25A10Q9UBX3 287 aaPredicted RBP6.51□□□□□ -1.37
XRN1-212ENST00000486211 SLC7A7Q9UM01 511 aa6.51□□□□□ -1.37
XRN1-212ENST00000486211 AURKCQ9UQB9 309 aa6.51□□□□□ -1.37
XRN1-212ENST00000486211 NOP16Q9Y3C1 178 aaKnown RBP6.51□□□□□ -1.37
XRN1-212ENST00000486211 IGLV1-36A0A0B4J1U3 117 aa6.5□□□□□ -1.37
XRN1-212ENST00000486211 CPSF4LA6NMK7 179 aaKnown RBP6.5□□□□□ -1.37
XRN1-212ENST00000486211 CD300LBA8K4G0 201 aa6.5□□□□□ -1.37
XRN1-212ENST00000486211 ODF3BA8MYP8 253 aa6.5□□□□□ -1.37
XRN1-212ENST00000486211 SEC14L6B5MCN3 397 aa6.5□□□□□ -1.37
XRN1-212ENST00000486211 C5orf58C9J3I9 102 aa6.5□□□□□ -1.37
XRN1-212ENST00000486211 PRR23D1E9PI22 279 aaPredicted RBP6.5□□□□□ -1.37
XRN1-212ENST00000486211 NPIPB6E9PJ23 425 aa6.5□□□□□ -1.37
XRN1-212ENST00000486211 RIPK2O43353 540 aa6.5□□□□□ -1.37
XRN1-212ENST00000486211 GLCEO94923 617 aa6.5□□□□□ -1.37
XRN1-212ENST00000486211 AMY1AP04745 511 aa6.5□□□□□ -1.37
XRN1-212ENST00000486211 AMY2AP04746 511 aa6.5□□□□□ -1.37
XRN1-212ENST00000486211 PRR23D2P0DMB1 279 aaPredicted RBP6.5□□□□□ -1.37
XRN1-212ENST00000486211 HOXB9P17482 250 aaPredicted RBP6.5□□□□□ -1.37
XRN1-212ENST00000486211 LGALS4P56470 323 aa6.5□□□□□ -1.37
XRN1-212ENST00000486211 ERVFRD-1P60508 538 aa6.5□□□□□ -1.37
XRN1-212ENST00000486211 FADDQ13158 208 aa6.5□□□□□ -1.37
XRN1-212ENST00000486211 SSX2Q16385 188 aa6.5□□□□□ -1.37
XRN1-212ENST00000486211 C8orf74Q6P047 294 aa6.5□□□□□ -1.37
XRN1-212ENST00000486211 WDR82Q6UXN9 313 aa6.5□□□□□ -1.37
XRN1-212ENST00000486211 RBM45Q8IUH3 476 aaKnown RBP6.5□□□□□ -1.37
XRN1-212ENST00000486211 C4orf33Q8N1A6 199 aa6.5□□□□□ -1.37
XRN1-212ENST00000486211 KLHL30-AS1Q8NEE0 82 aa6.5□□□□□ -1.37
XRN1-212ENST00000486211 SLC26A10Q8NG04 563 aa6.5□□□□□ -1.37
XRN1-212ENST00000486211 OR4D11Q8NGI4 311 aa6.5□□□□□ -1.37
XRN1-212ENST00000486211 OR6T1Q8NGN1 323 aa6.5□□□□□ -1.37
XRN1-212ENST00000486211 OR5K1Q8NHB7 308 aa6.5□□□□□ -1.37
XRN1-212ENST00000486211 PFN4Q8NHR9 129 aa6.5□□□□□ -1.37
XRN1-212ENST00000486211 SPRYD4Q8WW59 207 aaPredicted RBP6.5□□□□□ -1.37
XRN1-212ENST00000486211 LIPHQ8WWY8 451 aa6.5□□□□□ -1.37
XRN1-212ENST00000486211 SLCO4A1Q96BD0 722 aa6.5□□□□□ -1.37
XRN1-212ENST00000486211 FOXRED1Q96CU9 486 aaPredicted RBP6.5□□□□□ -1.37
XRN1-212ENST00000486211 MALSU1Q96EH3 234 aa6.5□□□□□ -1.37
XRN1-212ENST00000486211 MPP4Q96JB8 637 aa6.5□□□□□ -1.37
XRN1-212ENST00000486211 COQ7Q99807 217 aa6.5□□□□□ -1.37
XRN1-212ENST00000486211 RSRP1Q9BUV0 290 aa6.5□□□□□ -1.37
XRN1-212ENST00000486211 SPATA5L1Q9BVQ7 753 aa6.5□□□□□ -1.37
XRN1-212ENST00000486211 DNTTIP1Q9H147 329 aa6.5□□□□□ -1.37
XRN1-212ENST00000486211 EVA1AQ9H8M9 152 aa6.5□□□□□ -1.37
XRN1-212ENST00000486211 HEXA-AS1Q9H8Q6 139 aa6.5□□□□□ -1.37
XRN1-212ENST00000486211 AIG1Q9NVV5 245 aa6.5□□□□□ -1.37
XRN1-212ENST00000486211 SLC13A4Q9UKG4 626 aa6.5□□□□□ -1.37
XRN1-212ENST00000486211 TRAPPC13A5PLN9 417 aa6.49□□□□□ -1.37
XRN1-212ENST00000486211 PRORSD1PA6NEY8 169 aa6.49□□□□□ -1.37
XRN1-212ENST00000486211 SH2D7A6NKC9 451 aaPredicted RBP6.49□□□□□ -1.37
XRN1-212ENST00000486211 NUDT19A8MXV4 375 aa6.49□□□□□ -1.37
XRN1-212ENST00000486211 H7C1C5 153 aa6.49□□□□□ -1.37
XRN1-212ENST00000486211 CCL24O00175 119 aa6.49□□□□□ -1.37
XRN1-212ENST00000486211 LDLRAD4O15165 306 aa6.49□□□□□ -1.37
XRN1-212ENST00000486211 SIGLEC5O15389 551 aa6.49□□□□□ -1.37
XRN1-212ENST00000486211 LY86O95711 162 aa6.49□□□□□ -1.37
XRN1-212ENST00000486211 MT-ND1P03886 318 aa6.49□□□□□ -1.37
XRN1-212ENST00000486211 ACSM4P0C7M7 580 aa6.49□□□□□ -1.37
XRN1-212ENST00000486211 CTLA4P16410 223 aa6.49□□□□□ -1.37
XRN1-212ENST00000486211 NDUFB7P17568 137 aa6.49□□□□□ -1.37
XRN1-212ENST00000486211 LBPP18428 481 aa6.49□□□□□ -1.37
XRN1-212ENST00000486211 KRT4P19013 534 aa6.49□□□□□ -1.37
XRN1-212ENST00000486211 ANOS1P23352 680 aa6.49□□□□□ -1.37
XRN1-212ENST00000486211 AZGP1P25311 298 aaKnown RBP6.49□□□□□ -1.37
XRN1-212ENST00000486211 GGT2P36268 569 aa6.49□□□□□ -1.37
XRN1-212ENST00000486211 RAB25P57735 213 aa6.49□□□□□ -1.37
XRN1-212ENST00000486211 LSM6P62312 80 aaKnown RBP6.49□□□□□ -1.37
XRN1-212ENST00000486211 LCN6P62502 163 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms