RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 ZNF416Q9BWM5 594 aa4.29□□□□□ -1.72
RTN4-214ENST00000486085 LRTM1Q9HBL6 345 aa4.29□□□□□ -1.72
RTN4-214ENST00000486085 FGFR1OP2Q9NVK5 253 aa4.29□□□□□ -1.72
RTN4-214ENST00000486085 C14orf105Q9NVL8 296 aa4.29□□□□□ -1.72
RTN4-214ENST00000486085 AIG1Q9NVV5 245 aa4.29□□□□□ -1.72
RTN4-214ENST00000486085 PAK1IP1Q9NWT1 392 aaPredicted RBP4.29□□□□□ -1.72
RTN4-214ENST00000486085 NXT1Q9UKK6 140 aaKnown RBP4.29□□□□□ -1.72
RTN4-214ENST00000486085 PSME2Q9UL46 239 aa4.29□□□□□ -1.72
RTN4-214ENST00000486085 SAMD4AQ9UPU9 718 aaKnown RBP4.29□□□□□ -1.72
RTN4-214ENST00000486085 ARL2BPQ9Y2Y0 163 aa4.29□□□□□ -1.72
RTN4-214ENST00000486085 APC2O95996 2303 aa4.29□□□□□ -1.72
RTN4-214ENST00000486085 ACACAQ13085 2346 aa4.29□□□□□ -1.72
RTN4-214ENST00000486085 CROCCQ5TZA2 2017 aa4.29□□□□□ -1.72
RTN4-214ENST00000486085 FREM2Q5SZK8 3169 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 SPTBP11277 2137 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 ANKRD11Q6UB99 2663 aaPredicted RBP4.28□□□□□ -1.72
RTN4-214ENST00000486085 PTPRBP23467 1997 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 IGKV3D-11A0A0A0MRZ8 115 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 A0A1B0GX78 115 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 VSTM2BA6NLU5 285 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 DHRS7CA6NNS2 312 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 C21orf140B9A014 251 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 FCN1O00602 326 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 POLR1CO15160 346 aaPredicted RBP4.28□□□□□ -1.72
RTN4-214ENST00000486085 CCDC22O60826 627 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 GPX5O75715 221 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 DCTN3O75935 186 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 OR2B3O76000 313 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 ETHE1O95571 254 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 DNAH10OSP0CZ25 163 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 FOLR1P15328 257 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 ZNF19P17023 458 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 PRPS1L1P21108 318 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 AQP5P55064 265 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 CLDN8P56748 225 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 ARPC4P59998 168 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 LYZP61626 148 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 B2MP61769 119 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 PSPHP78330 225 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 MRPS11P82912 194 aaKnown RBP4.28□□□□□ -1.72
RTN4-214ENST00000486085 MRPS15P82914 257 aaKnown RBP4.28□□□□□ -1.72
RTN4-214ENST00000486085 ZNF763Q0D2J5 394 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 RIPK1Q13546 671 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 RCAN2Q14206 197 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 PRR4Q16378 134 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 TMEM41BQ5BJD5 291 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 HES3Q5TGS1 186 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 CLEC6AQ6EIG7 209 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 FRMPD2BQ6IN97 320 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 FAM71E1Q6IPT2 247 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 NOXRED1Q6NXP6 359 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 FAM92BQ6ZTR7 304 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 RPS27LQ71UM5 84 aaKnown RBP4.28□□□□□ -1.72
RTN4-214ENST00000486085 TRPM8Q7Z2W7 1104 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 DPY19L4Q7Z388 723 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 COMMD6Q7Z4G1 85 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 ZNF573Q86YE8 665 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 CDH26Q8IXH8 852 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 CEND1Q8N111 149 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 ACOT4Q8N9L9 421 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 TTC29Q8NA56 475 aaPredicted RBP4.28□□□□□ -1.72
RTN4-214ENST00000486085 PLPP5Q8NEB5 264 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 DEFB124Q8NES8 71 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 NANPQ8TBE9 248 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 KCNA7Q96RP8 456 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 NRTNQ99748 197 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 Q9H3A6 140 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 ZNF702PQ9H963 129 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 TMEM9Q9P0T7 183 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 SPRR3Q9UBC9 169 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 PHF11Q9UIL8 331 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 CES1P1Q9UKY3 287 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 C15orf41Q9Y2V0 281 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 MMACHCQ9Y4U1 282 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 NEUROG3Q9Y4Z2 214 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 ASB4Q9Y574 426 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 TIMM22Q9Y584 194 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 SPACA6W5XKT8 324 aa4.28□□□□□ -1.72
RTN4-214ENST00000486085 A0A1W2PNU3 283 aaPredicted RBP4.27□□□□□ -1.73
RTN4-214ENST00000486085 ZFP92A6NM28 416 aa4.27□□□□□ -1.73
RTN4-214ENST00000486085 BBIP1A8MTZ0 92 aa4.27□□□□□ -1.73
RTN4-214ENST00000486085 A8MU10 97 aa4.27□□□□□ -1.73
RTN4-214ENST00000486085 C4orf51C9J302 202 aa4.27□□□□□ -1.73
RTN4-214ENST00000486085 UBDO15205 165 aa4.27□□□□□ -1.73
RTN4-214ENST00000486085 HCRTR1O43613 425 aa4.27□□□□□ -1.73
RTN4-214ENST00000486085 SULT1B1O43704 296 aa4.27□□□□□ -1.73
RTN4-214ENST00000486085 SCN2BO60939 215 aa4.27□□□□□ -1.73
RTN4-214ENST00000486085 MYO1DO94832 1006 aa4.27□□□□□ -1.73
RTN4-214ENST00000486085 LYPD3O95274 346 aa4.27□□□□□ -1.73
RTN4-214ENST00000486085 HSPB1P04792 205 aaKnown RBP4.27□□□□□ -1.73
RTN4-214ENST00000486085 IL6P05231 212 aa4.27□□□□□ -1.73
RTN4-214ENST00000486085 GUSBP08236 651 aa4.27□□□□□ -1.73
RTN4-214ENST00000486085 UBTFL6P0CB48 400 aaPredicted RBP4.27□□□□□ -1.73
RTN4-214ENST00000486085 CLUP10909 449 aa4.27□□□□□ -1.73
RTN4-214ENST00000486085 RPL29P47914 159 aaKnown RBP4.27□□□□□ -1.73
RTN4-214ENST00000486085 DIO3P55073 304 aa4.27□□□□□ -1.73
RTN4-214ENST00000486085 RAB38P57729 211 aa4.27□□□□□ -1.73
RTN4-214ENST00000486085 VSX2P58304 361 aaPredicted RBP4.27□□□□□ -1.73
RTN4-214ENST00000486085 TNFRSF17Q02223 184 aa4.27□□□□□ -1.73
RTN4-214ENST00000486085 MAPRE2Q15555 327 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms