RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 FAM20BO75063 409 aa10.04□□□□□ -0.8
HPS4-214ENST00000485842 RP2O75695 350 aa10.04□□□□□ -0.8
HPS4-214ENST00000485842 IGHA1P01876 353 aa10.04□□□□□ -0.8
HPS4-214ENST00000485842 TTRP02766 147 aa10.04□□□□□ -0.8
HPS4-214ENST00000485842 ZNF19P17023 458 aa10.04□□□□□ -0.8
HPS4-214ENST00000485842 TNFRSF1AP19438 455 aa10.04□□□□□ -0.8
HPS4-214ENST00000485842 ACHEP22303 614 aa10.04□□□□□ -0.8
HPS4-214ENST00000485842 GNALP38405 381 aa10.04□□□□□ -0.8
HPS4-214ENST00000485842 DDOSTP39656 456 aa10.04□□□□□ -0.8
HPS4-214ENST00000485842 CRYBB2P43320 205 aa10.04□□□□□ -0.8
HPS4-214ENST00000485842 NR4A2P43354 598 aa10.04□□□□□ -0.8
HPS4-214ENST00000485842 GPR6P46095 362 aaPredicted RBP10.04□□□□□ -0.8
HPS4-214ENST00000485842 OR12D2P58182 307 aa10.04□□□□□ -0.8
HPS4-214ENST00000485842 ACTA2P62736 377 aa10.04□□□□□ -0.8
HPS4-214ENST00000485842 ACTG2P63267 376 aa10.04□□□□□ -0.8
HPS4-214ENST00000485842 HFEQ30201 348 aa10.04□□□□□ -0.8
HPS4-214ENST00000485842 CDONQ4KMG0 1287 aa10.04□□□□□ -0.8
HPS4-214ENST00000485842 THAP5Q7Z6K1 395 aa10.04□□□□□ -0.8
HPS4-214ENST00000485842 CATSPERDQ86XM0 798 aa10.04□□□□□ -0.8
HPS4-214ENST00000485842 OR51E1Q8TCB6 317 aa10.04□□□□□ -0.8
HPS4-214ENST00000485842 CCL17Q92583 94 aa10.04□□□□□ -0.8
HPS4-214ENST00000485842 MEGF10Q96KG7 1140 aa10.04□□□□□ -0.8
HPS4-214ENST00000485842 C4orf36Q96KX1 117 aa10.04□□□□□ -0.8
HPS4-214ENST00000485842 PAPOLGQ9BWT3 736 aaKnown RBP10.04□□□□□ -0.8
HPS4-214ENST00000485842 SLC22A4Q9H015 551 aa10.04□□□□□ -0.8
HPS4-214ENST00000485842 NARFLQ9H6Q4 476 aa10.04□□□□□ -0.8
HPS4-214ENST00000485842 G6PC2Q9NQR9 355 aa10.04□□□□□ -0.8
HPS4-214ENST00000485842 DLL4Q9NR61 685 aa10.04□□□□□ -0.8
HPS4-214ENST00000485842 ERVK13-1Q9NX77 482 aa10.04□□□□□ -0.8
HPS4-214ENST00000485842 MRPL15Q9P015 296 aaKnown RBP10.04□□□□□ -0.8
HPS4-214ENST00000485842 IL19Q9UHD0 177 aa10.04□□□□□ -0.8
HPS4-214ENST00000485842 ZNF391Q9UJN7 358 aa10.04□□□□□ -0.8
HPS4-214ENST00000485842 CELSR1Q9NYQ6 3014 aa10.04□□□□□ -0.8
HPS4-214ENST00000485842 MED13LQ71F56 2210 aa10.04□□□□□ -0.8
HPS4-214ENST00000485842 HIVEP1P15822 2718 aa10.04□□□□□ -0.8
HPS4-214ENST00000485842 DYSFO75923 2080 aa10.03□□□□□ -0.8
HPS4-214ENST00000485842 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.03□□□□□ -0.8
HPS4-214ENST00000485842 IRGMA1A4Y4 181 aa10.03□□□□□ -0.8
HPS4-214ENST00000485842 H3BSH0 61 aa10.03□□□□□ -0.8
HPS4-214ENST00000485842 P2RY10O00398 339 aa10.03□□□□□ -0.8
HPS4-214ENST00000485842 RRP9O43818 475 aaKnown RBP10.03□□□□□ -0.8
HPS4-214ENST00000485842 XPNPEP2O43895 674 aa10.03□□□□□ -0.8
HPS4-214ENST00000485842 HTR1AP08908 422 aa10.03□□□□□ -0.8
HPS4-214ENST00000485842 INHBBP09529 407 aa10.03□□□□□ -0.8
HPS4-214ENST00000485842 TACSTD2P09758 323 aa10.03□□□□□ -0.8
HPS4-214ENST00000485842 ACKR3P25106 362 aa10.03□□□□□ -0.8
HPS4-214ENST00000485842 GIFP27352 417 aa10.03□□□□□ -0.8
HPS4-214ENST00000485842 RBMXP38159 391 aaKnown RBP10.03□□□□□ -0.8
HPS4-214ENST00000485842 VHLP40337 213 aa10.03□□□□□ -0.8
HPS4-214ENST00000485842 HSPA13P48723 471 aa10.03□□□□□ -0.8
HPS4-214ENST00000485842 SRP9P49458 86 aaKnown RBP10.03□□□□□ -0.8
HPS4-214ENST00000485842 MRPS11P82912 194 aaKnown RBP10.03□□□□□ -0.8
HPS4-214ENST00000485842 RIN1Q13671 783 aa10.03□□□□□ -0.8
HPS4-214ENST00000485842 GALEQ14376 348 aa10.03□□□□□ -0.8
HPS4-214ENST00000485842 OR8B8Q15620 311 aa10.03□□□□□ -0.8
HPS4-214ENST00000485842 WDR38Q5JTN6 314 aa10.03□□□□□ -0.8
HPS4-214ENST00000485842 AVPI1Q5T686 147 aa10.03□□□□□ -0.8
HPS4-214ENST00000485842 PRAMEF6Q5VXH4 476 aa10.03□□□□□ -0.8
HPS4-214ENST00000485842 ELMOD2Q8IZ81 293 aa10.03□□□□□ -0.8
HPS4-214ENST00000485842 ZNF540Q8NDQ6 660 aa10.03□□□□□ -0.8
HPS4-214ENST00000485842 CSNK2A3Q8NEV1 391 aa10.03□□□□□ -0.8
HPS4-214ENST00000485842 BPIFB6Q8NFQ5 453 aa10.03□□□□□ -0.8
HPS4-214ENST00000485842 RORBQ92753 470 aa10.03□□□□□ -0.8
HPS4-214ENST00000485842 FGF20Q9NP95 211 aaPredicted RBP10.03□□□□□ -0.8
HPS4-214ENST00000485842 INPP5EQ9NRR6 644 aa10.03□□□□□ -0.8
HPS4-214ENST00000485842 MRPS18AQ9NVS2 196 aaKnown RBP10.03□□□□□ -0.8
HPS4-214ENST00000485842 DCAF16Q9NXF7 216 aa10.03□□□□□ -0.8
HPS4-214ENST00000485842 PPP1R3CQ9UQK1 317 aa10.03□□□□□ -0.8
HPS4-214ENST00000485842 NOP16Q9Y3C1 178 aaKnown RBP10.03□□□□□ -0.8
HPS4-214ENST00000485842 RHBDD3Q9Y3P4 386 aa10.03□□□□□ -0.8
HPS4-214ENST00000485842 ACANP16112 2415 aa10.02□□□□□ -0.81
HPS4-214ENST00000485842 A0A096LNT2 108 aa10.02□□□□□ -0.81
HPS4-214ENST00000485842 IGHV4-61A0A0C4DH41 118 aa10.02□□□□□ -0.81
HPS4-214ENST00000485842 A0A1B0GWJ7 208 aa10.02□□□□□ -0.81
HPS4-214ENST00000485842 ZNF850A8MQ14 1090 aa10.02□□□□□ -0.81
HPS4-214ENST00000485842 CLDN25C9JDP6 229 aa10.02□□□□□ -0.81
HPS4-214ENST00000485842 GMDSO60547 372 aa10.02□□□□□ -0.81
HPS4-214ENST00000485842 FAHP16930 419 aa10.02□□□□□ -0.81
HPS4-214ENST00000485842 USF1P22415 310 aaPredicted RBP10.02□□□□□ -0.81
HPS4-214ENST00000485842 DCKP27707 260 aa10.02□□□□□ -0.81
HPS4-214ENST00000485842 KIR3DL2P43630 455 aa10.02□□□□□ -0.81
HPS4-214ENST00000485842 MAP2K3P46734 347 aa10.02□□□□□ -0.81
HPS4-214ENST00000485842 ETV1P50549 477 aa10.02□□□□□ -0.81
HPS4-214ENST00000485842 MVKQ03426 396 aa10.02□□□□□ -0.81
HPS4-214ENST00000485842 PRDX4Q13162 271 aa10.02□□□□□ -0.81
HPS4-214ENST00000485842 SNCBQ16143 134 aa10.02□□□□□ -0.81
HPS4-214ENST00000485842 LAIR2Q6ISS4 152 aa10.02□□□□□ -0.81
HPS4-214ENST00000485842 AHSA2Q719I0 299 aa10.02□□□□□ -0.81
HPS4-214ENST00000485842 KCTD20Q7Z5Y7 419 aa10.02□□□□□ -0.81
HPS4-214ENST00000485842 MOGAT3Q86VF5 341 aa10.02□□□□□ -0.81
HPS4-214ENST00000485842 PRSS35Q8N3Z0 413 aa10.02□□□□□ -0.81
HPS4-214ENST00000485842 FTMTQ8N4E7 242 aa10.02□□□□□ -0.81
HPS4-214ENST00000485842 OR8S1Q8NH09 359 aa10.02□□□□□ -0.81
HPS4-214ENST00000485842 ZNF420Q8TAQ5 688 aaPredicted RBP10.02□□□□□ -0.81
HPS4-214ENST00000485842 FBLIM1Q8WUP2 373 aa10.02□□□□□ -0.81
HPS4-214ENST00000485842 PIGCQ92535 297 aa10.02□□□□□ -0.81
HPS4-214ENST00000485842 GGHQ92820 318 aa10.02□□□□□ -0.81
HPS4-214ENST00000485842 PELI1Q96FA3 418 aa10.02□□□□□ -0.81
HPS4-214ENST00000485842 MYCBPQ99417 103 aaPredicted RBP10.02□□□□□ -0.81
HPS4-214ENST00000485842 SMR3AQ99954 134 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms