RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 ARMC1Q9NVT9 282 aa14.23□□□□□ -0.13
SMC4-216ENST00000485645 SAMHD1Q9Y3Z3 626 aaKnown RBP14.23□□□□□ -0.13
SMC4-216ENST00000485645 TCRBV5S2A0A599 114 aa14.22□□□□□ -0.13
SMC4-216ENST00000485645 DHRS12A0PJE2 317 aa14.22□□□□□ -0.13
SMC4-216ENST00000485645 SRRM5B3KS81 715 aa14.22□□□□□ -0.13
SMC4-216ENST00000485645 GYPAP02724 150 aa14.22□□□□□ -0.13
SMC4-216ENST00000485645 ANXA2P07355 339 aaKnown RBP14.22□□□□□ -0.13
SMC4-216ENST00000485645 SFTPBP07988 381 aa14.22□□□□□ -0.13
SMC4-216ENST00000485645 MDKP21741 143 aaPredicted RBP14.22□□□□□ -0.13
SMC4-216ENST00000485645 OMGP23515 440 aa14.22□□□□□ -0.13
SMC4-216ENST00000485645 HSD11B1P28845 292 aa14.22□□□□□ -0.13
SMC4-216ENST00000485645 EIF2B1Q14232 305 aaKnown RBP14.22□□□□□ -0.13
SMC4-216ENST00000485645 METTL11BQ5VVY1 283 aa14.22□□□□□ -0.13
SMC4-216ENST00000485645 RUSC1-AS1Q66K80 236 aa14.22□□□□□ -0.13
SMC4-216ENST00000485645 OR2T5Q6IEZ7 315 aa14.22□□□□□ -0.13
SMC4-216ENST00000485645 OR2T29Q8NH02 315 aa14.22□□□□□ -0.13
SMC4-216ENST00000485645 OR8S1Q8NH09 359 aa14.22□□□□□ -0.13
SMC4-216ENST00000485645 WDFY2Q96P53 400 aa14.22□□□□□ -0.13
SMC4-216ENST00000485645 SLITRK2Q9H156 845 aa14.22□□□□□ -0.13
SMC4-216ENST00000485645 RASSF4Q9H2L5 321 aa14.22□□□□□ -0.13
SMC4-216ENST00000485645 TOR3AQ9H497 397 aa14.22□□□□□ -0.13
SMC4-216ENST00000485645 SP140LQ9H930 580 aa14.22□□□□□ -0.13
SMC4-216ENST00000485645 SMURF1Q9HCE7 757 aa14.22□□□□□ -0.13
SMC4-216ENST00000485645 TNFRSF19Q9NS68 423 aa14.22□□□□□ -0.13
SMC4-216ENST00000485645 U3KQV3 271 aa14.22□□□□□ -0.13
SMC4-216ENST00000485645 CENPVL3A0A0U1RRI6 287 aa14.21□□□□□ -0.13
SMC4-216ENST00000485645 FAM181BA6NEQ2 426 aa14.21□□□□□ -0.13
SMC4-216ENST00000485645 RIIAD1A6NNX1 92 aa14.21□□□□□ -0.13
SMC4-216ENST00000485645 LHBP01229 141 aa14.21□□□□□ -0.13
SMC4-216ENST00000485645 APOC1P02654 83 aa14.21□□□□□ -0.13
SMC4-216ENST00000485645 CRYBA1P05813 215 aa14.21□□□□□ -0.13
SMC4-216ENST00000485645 MMP9P14780 707 aa14.21□□□□□ -0.13
SMC4-216ENST00000485645 ZNF3P17036 446 aa14.21□□□□□ -0.13
SMC4-216ENST00000485645 GRK5P34947 590 aa14.21□□□□□ -0.13
SMC4-216ENST00000485645 CX3CR1P49238 355 aa14.21□□□□□ -0.13
SMC4-216ENST00000485645 FAM3AP98173 230 aa14.21□□□□□ -0.13
SMC4-216ENST00000485645 MS4A2Q01362 244 aa14.21□□□□□ -0.13
SMC4-216ENST00000485645 TIGD6Q17RP2 521 aa14.21□□□□□ -0.13
SMC4-216ENST00000485645 LCN8Q6JVE9 175 aa14.21□□□□□ -0.13
SMC4-216ENST00000485645 Q6YL49 198 aa14.21□□□□□ -0.13
SMC4-216ENST00000485645 SLC16A9Q7RTY1 509 aa14.21□□□□□ -0.13
SMC4-216ENST00000485645 DHFR2Q86XF0 187 aa14.21□□□□□ -0.13
SMC4-216ENST00000485645 FAM90A1Q86YD7 464 aa14.21□□□□□ -0.13
SMC4-216ENST00000485645 GATAD2BQ8WXI9 593 aa14.21□□□□□ -0.13
SMC4-216ENST00000485645 REEP6Q96HR9 211 aa14.21□□□□□ -0.13
SMC4-216ENST00000485645 FAM71F1Q96KD3 344 aaPredicted RBP14.21□□□□□ -0.13
SMC4-216ENST00000485645 TBX15Q96SF7 602 aa14.21□□□□□ -0.13
SMC4-216ENST00000485645 CMC2Q9NRP2 79 aa14.21□□□□□ -0.13
SMC4-216ENST00000485645 VNN3Q9NY84 501 aa14.21□□□□□ -0.13
SMC4-216ENST00000485645 MMP24Q9Y5R2 645 aa14.21□□□□□ -0.13
SMC4-216ENST00000485645 A0A1B0GUS0 222 aa14.2□□□□□ -0.14
SMC4-216ENST00000485645 ECDO95905 644 aaPredicted RBP14.2□□□□□ -0.14
SMC4-216ENST00000485645 PDCD1Q15116 288 aa14.2□□□□□ -0.14
SMC4-216ENST00000485645 C11orf91Q3C1V1 193 aa14.2□□□□□ -0.14
SMC4-216ENST00000485645 FAM98BQ52LJ0 330 aaKnown RBP14.2□□□□□ -0.14
SMC4-216ENST00000485645 LINC01590Q5TEZ4 76 aa14.2□□□□□ -0.14
SMC4-216ENST00000485645 TEX36Q5VZQ5 186 aa14.2□□□□□ -0.14
SMC4-216ENST00000485645 FIP1L1Q6UN15 594 aaKnown RBP14.2□□□□□ -0.14
SMC4-216ENST00000485645 BTN2A1Q7KYR7 527 aa14.2□□□□□ -0.14
SMC4-216ENST00000485645 DPY19L4Q7Z388 723 aa14.2□□□□□ -0.14
SMC4-216ENST00000485645 ERI1Q8IV48 349 aaKnown RBP14.2□□□□□ -0.14
SMC4-216ENST00000485645 TMEM86BQ8N661 226 aa14.2□□□□□ -0.14
SMC4-216ENST00000485645 OR6N2Q8NGY6 317 aa14.2□□□□□ -0.14
SMC4-216ENST00000485645 TEX47Q8TBZ9 253 aa14.2□□□□□ -0.14
SMC4-216ENST00000485645 SGK3Q96BR1 496 aa14.2□□□□□ -0.14
SMC4-216ENST00000485645 ASB9Q96DX5 294 aa14.2□□□□□ -0.14
SMC4-216ENST00000485645 INTS14Q96SY0 518 aa14.2□□□□□ -0.14
SMC4-216ENST00000485645 MARCH7Q9H992 704 aa14.2□□□□□ -0.14
SMC4-216ENST00000485645 RNPEPL1Q9HAU8 725 aa14.2□□□□□ -0.14
SMC4-216ENST00000485645 KAAG1Q9UBP8 84 aa14.2□□□□□ -0.14
SMC4-216ENST00000485645 IGHV3OR15-7A0A075B7D8 119 aa14.19□□□□□ -0.14
SMC4-216ENST00000485645 DVL1O14640 695 aa14.19□□□□□ -0.14
SMC4-216ENST00000485645 TIPRLO75663 272 aa14.19□□□□□ -0.14
SMC4-216ENST00000485645 CFL1P23528 166 aaKnown RBP14.19□□□□□ -0.14
SMC4-216ENST00000485645 ARF6P62330 175 aa14.19□□□□□ -0.14
SMC4-216ENST00000485645 POU4F2Q12837 409 aa14.19□□□□□ -0.14
SMC4-216ENST00000485645 MICBQ29980 383 aa14.19□□□□□ -0.14
SMC4-216ENST00000485645 TREML4Q6UXN2 200 aa14.19□□□□□ -0.14
SMC4-216ENST00000485645 CD300LDQ6UXZ3 194 aa14.19□□□□□ -0.14
SMC4-216ENST00000485645 FAM57BQ71RH2 274 aa14.19□□□□□ -0.14
SMC4-216ENST00000485645 SHFQ7M4L6 423 aa14.19□□□□□ -0.14
SMC4-216ENST00000485645 C11orf53Q8IXP5 236 aa14.19□□□□□ -0.14
SMC4-216ENST00000485645 OR10G2Q8NGC3 310 aa14.19□□□□□ -0.14
SMC4-216ENST00000485645 OR52H1Q8NGJ2 320 aa14.19□□□□□ -0.14
SMC4-216ENST00000485645 LRRC29Q8WV35 223 aa14.19□□□□□ -0.14
SMC4-216ENST00000485645 RNF133Q8WVZ7 376 aa14.19□□□□□ -0.14
SMC4-216ENST00000485645 OTULINQ96BN8 352 aa14.19□□□□□ -0.14
SMC4-216ENST00000485645 CLPTM1LQ96KA5 538 aa14.19□□□□□ -0.14
SMC4-216ENST00000485645 NIPSNAP1Q9BPW8 284 aa14.19□□□□□ -0.14
SMC4-216ENST00000485645 THTPAQ9BU02 230 aa14.19□□□□□ -0.14
SMC4-216ENST00000485645 ABHD6Q9BV23 337 aa14.19□□□□□ -0.14
SMC4-216ENST00000485645 SIRPDQ9H106 197 aa14.19□□□□□ -0.14
SMC4-216ENST00000485645 MED20Q9H944 212 aa14.19□□□□□ -0.14
SMC4-216ENST00000485645 BEX1Q9HBH7 125 aa14.19□□□□□ -0.14
SMC4-216ENST00000485645 ACOXLQ9NUZ1 547 aa14.19□□□□□ -0.14
SMC4-216ENST00000485645 DNAJC27Q9NZQ0 273 aa14.19□□□□□ -0.14
SMC4-216ENST00000485645 MEGF8Q7Z7M0 2845 aa14.19□□□□□ -0.14
SMC4-216ENST00000485645 FAM183AA6NL82 134 aa14.18□□□□□ -0.14
SMC4-216ENST00000485645 H3BN98 237 aa14.18□□□□□ -0.14
SMC4-216ENST00000485645 GYG2O15488 501 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms