RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 QRSL1Q9H0R6 528 aaKnown RBP9.45□□□□□ -0.9
DDX56-212ENST00000485367 OR10A4Q9H209 315 aa9.45□□□□□ -0.9
DDX56-212ENST00000485367 SLC38A1Q9H2H9 487 aa9.45□□□□□ -0.9
DDX56-212ENST00000485367 OR52D1Q9H346 318 aa9.45□□□□□ -0.9
DDX56-212ENST00000485367 PLEKHF2Q9H8W4 249 aa9.45□□□□□ -0.9
DDX56-212ENST00000485367 NRIP3Q9NQ35 241 aa9.45□□□□□ -0.9
DDX56-212ENST00000485367 PLSCR4Q9NRQ2 329 aa9.45□□□□□ -0.9
DDX56-212ENST00000485367 GLRX2Q9NS18 164 aa9.45□□□□□ -0.9
DDX56-212ENST00000485367 NKIRAS2Q9NYR9 191 aa9.45□□□□□ -0.9
DDX56-212ENST00000485367 ZNF69Q9UC07 566 aa9.45□□□□□ -0.9
DDX56-212ENST00000485367 WDR45Q9Y484 360 aa9.45□□□□□ -0.9
DDX56-212ENST00000485367 ANXA2P2A6NMY6 339 aa9.44□□□□□ -0.9
DDX56-212ENST00000485367 LINC00587B1AMM8 73 aa9.44□□□□□ -0.9
DDX56-212ENST00000485367 GPRIN2O60269 458 aa9.44□□□□□ -0.9
DDX56-212ENST00000485367 KHDRBS3O75525 346 aaKnown RBP9.44□□□□□ -0.9
DDX56-212ENST00000485367 NTN1O95631 604 aa9.44□□□□□ -0.9
DDX56-212ENST00000485367 UBBP0CG47 229 aa9.44□□□□□ -0.9
DDX56-212ENST00000485367 UBCP0CG48 685 aaKnown RBP9.44□□□□□ -0.9
DDX56-212ENST00000485367 PRG2P13727 222 aa9.44□□□□□ -0.9
DDX56-212ENST00000485367 RPA2P15927 270 aa9.44□□□□□ -0.9
DDX56-212ENST00000485367 CCKARP32238 428 aa9.44□□□□□ -0.9
DDX56-212ENST00000485367 RPS27AP62979 156 aaKnown RBP9.44□□□□□ -0.9
DDX56-212ENST00000485367 UBA52P62987 128 aaKnown RBP9.44□□□□□ -0.9
DDX56-212ENST00000485367 FGL1Q08830 312 aa9.44□□□□□ -0.9
DDX56-212ENST00000485367 SFRP4Q6FHJ7 346 aaPredicted RBP9.44□□□□□ -0.9
DDX56-212ENST00000485367 LINGO2Q7L985 606 aa9.44□□□□□ -0.9
DDX56-212ENST00000485367 MEX3DQ86XN8 651 aaKnown RBP9.44□□□□□ -0.9
DDX56-212ENST00000485367 SMAP2Q8WU79 429 aaPredicted RBP9.44□□□□□ -0.9
DDX56-212ENST00000485367 ST8SIA2Q92186 375 aa9.44□□□□□ -0.9
DDX56-212ENST00000485367 GHSRQ92847 366 aa9.44□□□□□ -0.9
DDX56-212ENST00000485367 SMIM19Q96E16 107 aa9.44□□□□□ -0.9
DDX56-212ENST00000485367 MRPS24Q96EL2 167 aaKnown RBP9.44□□□□□ -0.9
DDX56-212ENST00000485367 TEAD3Q99594 435 aa9.44□□□□□ -0.9
DDX56-212ENST00000485367 C12orf49Q9H741 205 aa9.44□□□□□ -0.9
DDX56-212ENST00000485367 AUNIPQ9H7T9 357 aa9.44□□□□□ -0.9
DDX56-212ENST00000485367 POLE3Q9NRF9 147 aa9.44□□□□□ -0.9
DDX56-212ENST00000485367 IL20RAQ9UHF4 553 aa9.44□□□□□ -0.9
DDX56-212ENST00000485367 OPN4Q9UHM6 478 aa9.44□□□□□ -0.9
DDX56-212ENST00000485367 PURGQ9UJV8 347 aaKnown RBP9.44□□□□□ -0.9
DDX56-212ENST00000485367 SLC35A3Q9Y2D2 325 aa9.44□□□□□ -0.9
DDX56-212ENST00000485367 MTORP42345 2549 aa9.43□□□□□ -0.9
DDX56-212ENST00000485367 FAM183AA6NL82 134 aa9.43□□□□□ -0.9
DDX56-212ENST00000485367 E9PI62 339 aa9.43□□□□□ -0.9
DDX56-212ENST00000485367 J3QLW9 94 aa9.43□□□□□ -0.9
DDX56-212ENST00000485367 GUSBP08236 651 aa9.43□□□□□ -0.9
DDX56-212ENST00000485367 SMIM6P0DI80 62 aa9.43□□□□□ -0.9
DDX56-212ENST00000485367 ZNF19P17023 458 aa9.43□□□□□ -0.9
DDX56-212ENST00000485367 RAD52P43351 418 aa9.43□□□□□ -0.9
DDX56-212ENST00000485367 ZNF85Q03923 595 aa9.43□□□□□ -0.9
DDX56-212ENST00000485367 CDK5R1Q15078 307 aa9.43□□□□□ -0.9
DDX56-212ENST00000485367 ZNF124Q15973 351 aa9.43□□□□□ -0.9
DDX56-212ENST00000485367 ZNF239Q16600 458 aaKnown RBP9.43□□□□□ -0.9
DDX56-212ENST00000485367 RNASE12Q5GAN4 147 aaKnown RBP9.43□□□□□ -0.9
DDX56-212ENST00000485367 SLC25A53Q5H9E4 307 aa9.43□□□□□ -0.9
DDX56-212ENST00000485367 UQCC3Q6UW78 93 aa9.43□□□□□ -0.9
DDX56-212ENST00000485367 ALKAL2Q6UX46 152 aa9.43□□□□□ -0.9
DDX56-212ENST00000485367 UNQ9370/PRO34162Q6UXP9 181 aa9.43□□□□□ -0.9
DDX56-212ENST00000485367 JAZF1Q86VZ6 243 aa9.43□□□□□ -0.9
DDX56-212ENST00000485367 CMTM4Q8IZR5 234 aa9.43□□□□□ -0.9
DDX56-212ENST00000485367 ZNF619Q8N2I2 560 aa9.43□□□□□ -0.9
DDX56-212ENST00000485367 DNAAF1Q8NEP3 725 aa9.43□□□□□ -0.9
DDX56-212ENST00000485367 LGALS14Q8TCE9 139 aa9.43□□□□□ -0.9
DDX56-212ENST00000485367 RNF128Q8TEB7 428 aa9.43□□□□□ -0.9
DDX56-212ENST00000485367 ABHD3Q8WU67 409 aa9.43□□□□□ -0.9
DDX56-212ENST00000485367 TMEM234Q8WY98 164 aa9.43□□□□□ -0.9
DDX56-212ENST00000485367 CPNE4Q96A23 557 aaPredicted RBP9.43□□□□□ -0.9
DDX56-212ENST00000485367 ZG16BQ96DA0 208 aa9.43□□□□□ -0.9
DDX56-212ENST00000485367 PIK3IP1Q96FE7 263 aa9.43□□□□□ -0.9
DDX56-212ENST00000485367 GAL3ST1Q99999 423 aa9.43□□□□□ -0.9
DDX56-212ENST00000485367 C1QTNF6Q9BXI9 259 aa9.43□□□□□ -0.9
DDX56-212ENST00000485367 ARL6Q9H0F7 186 aa9.43□□□□□ -0.9
DDX56-212ENST00000485367 BEX1Q9HBH7 125 aa9.43□□□□□ -0.9
DDX56-212ENST00000485367 ADGRL4Q9HBW9 690 aa9.43□□□□□ -0.9
DDX56-212ENST00000485367 BIN3Q9NQY0 253 aa9.43□□□□□ -0.9
DDX56-212ENST00000485367 CA10Q9NS85 328 aa9.43□□□□□ -0.9
DDX56-212ENST00000485367 FLVCR2Q9UPI3 526 aa9.43□□□□□ -0.9
DDX56-212ENST00000485367 IGHV3-15A0A0B4J1V0 119 aa9.42□□□□□ -0.9
DDX56-212ENST00000485367 A0A1W2PNR3 127 aa9.42□□□□□ -0.9
DDX56-212ENST00000485367 A0A1W2PPR1 153 aa9.42□□□□□ -0.9
DDX56-212ENST00000485367 CDHR4A6H8M9 788 aa9.42□□□□□ -0.9
DDX56-212ENST00000485367 RIIAD1A6NNX1 92 aa9.42□□□□□ -0.9
DDX56-212ENST00000485367 DEFB108AA8MXU0 73 aa9.42□□□□□ -0.9
DDX56-212ENST00000485367 CALCBP10092 127 aa9.42□□□□□ -0.9
DDX56-212ENST00000485367 PGCP20142 388 aa9.42□□□□□ -0.9
DDX56-212ENST00000485367 SLC2A5P22732 501 aa9.42□□□□□ -0.9
DDX56-212ENST00000485367 CRYGSP22914 178 aa9.42□□□□□ -0.9
DDX56-212ENST00000485367 AGTR1P30556 359 aa9.42□□□□□ -0.9
DDX56-212ENST00000485367 SCAND1P57086 179 aa9.42□□□□□ -0.9
DDX56-212ENST00000485367 RNPS1Q15287 305 aaKnown RBP9.42□□□□□ -0.9
DDX56-212ENST00000485367 RPL22L1Q6P5R6 122 aaKnown RBP9.42□□□□□ -0.9
DDX56-212ENST00000485367 FRRS1Q6ZNA5 592 aa9.42□□□□□ -0.9
DDX56-212ENST00000485367 DNM1P46Q6ZS02 220 aa9.42□□□□□ -0.9
DDX56-212ENST00000485367 FCRLAQ7L513 359 aa9.42□□□□□ -0.9
DDX56-212ENST00000485367 PRSS45Q7RTY3 260 aa9.42□□□□□ -0.9
DDX56-212ENST00000485367 RANBP3LQ86VV4 465 aaPredicted RBP9.42□□□□□ -0.9
DDX56-212ENST00000485367 VRK2Q86Y07 508 aa9.42□□□□□ -0.9
DDX56-212ENST00000485367 PXT1Q8NFP0 134 aa9.42□□□□□ -0.9
DDX56-212ENST00000485367 OR6S1Q8NH40 331 aa9.42□□□□□ -0.9
DDX56-212ENST00000485367 OR52I2Q8NH67 350 aa9.42□□□□□ -0.9
DDX56-212ENST00000485367 TMEM255BQ8WV15 326 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms