RNA–Protein interactions for RNA: ENST00000485042.1

XPA-203, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 3

Gene XPA, Length 706 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-203ENST00000485042 TMEM9BQ9NQ34 198 aa3.31□□□□□ -1.88
XPA-203ENST00000485042 SLC17A7Q9P2U7 560 aa3.31□□□□□ -1.88
XPA-203ENST00000485042 ABCD2Q9UBJ2 740 aa3.31□□□□□ -1.88
XPA-203ENST00000485042 APOBEC3BQ9UH17 382 aaKnown RBP3.31□□□□□ -1.88
XPA-203ENST00000485042 CCL26Q9Y258 94 aa3.31□□□□□ -1.88
XPA-203ENST00000485042 UGT2A1Q9Y4X1 527 aa3.31□□□□□ -1.88
XPA-203ENST00000485042 CSDC2Q9Y534 153 aaKnown RBP3.31□□□□□ -1.88
XPA-203ENST00000485042 MGAQ8IWI9 3026 aa3.31□□□□□ -1.88
XPA-203ENST00000485042 MYO18BQ8IUG5 2567 aa3.31□□□□□ -1.88
XPA-203ENST00000485042 TDRD6O60522 2096 aaKnown RBP3.31□□□□□ -1.88
XPA-203ENST00000485042 DOCK9Q9BZ29 2069 aa3.31□□□□□ -1.88
XPA-203ENST00000485042 CFAP46Q8IYW2 2715 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 HECTD1Q9ULT8 2610 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 PTPRQQ9UMZ3 2332 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 KNTC1P50748 2209 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 hCG_1818297A0A087WSY0 165 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 PNMA8CA0A1B0GUJ8 204 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 C9JVG2 144 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 HDAC3O15379 428 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 DNAJB6O75190 326 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 SNAPC5O75971 98 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 SUPT7LO94864 414 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 LYPLA2O95372 231 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 TMEM50AO95807 157 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 THY1P04216 161 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 KLK3P07288 261 aaPredicted RBP3.3□□□□□ -1.88
XPA-203ENST00000485042 PRPS2P11908 318 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 CSRP1P21291 193 aaKnown RBP3.3□□□□□ -1.88
XPA-203ENST00000485042 MSR1P21757 451 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 FASP25445 335 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 CD40LGP29965 261 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 HOXA6P31267 233 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 IFNA8P32881 189 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 SHMT2P34897 504 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 NUDT1P36639 197 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 SPAM1P38567 509 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 CDKN2BP42772 138 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 NUDT2P50583 147 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 RPL14P50914 215 aaKnown RBP3.3□□□□□ -1.88
XPA-203ENST00000485042 CDH6P55285 790 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 GABARAPL2P60520 117 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 YWHAGP61981 247 aaKnown RBP eCLIP3.3□□□□□ -1.88
XPA-203ENST00000485042 UBE2IP63279 158 aaKnown RBP3.3□□□□□ -1.88
XPA-203ENST00000485042 BASP1P80723 227 aaKnown RBP3.3□□□□□ -1.88
XPA-203ENST00000485042 DMC1Q14565 340 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 NCF4Q15080 339 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 PDK2Q15119 407 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 USF2Q15853 346 aaPredicted RBP3.3□□□□□ -1.88
XPA-203ENST00000485042 ZNF77Q15935 545 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 PRR4Q16378 134 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 SNRNP35Q16560 246 aaKnown RBP3.3□□□□□ -1.88
XPA-203ENST00000485042 MICBQ29980 383 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 ISXQ2M1V0 245 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 C15orf32Q32M92 178 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 COQ5Q5HYK3 327 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 SPOPLQ6IQ16 392 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 DNAJC24Q6P3W2 148 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 XKRXQ6PP77 449 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 WDR74Q6RFH5 385 aaPredicted RBP3.3□□□□□ -1.88
XPA-203ENST00000485042 EPGNQ6UW88 154 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 GTSCR1Q86UQ5 136 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 C17orf82Q86X59 251 aaPredicted RBP3.3□□□□□ -1.88
XPA-203ENST00000485042 ZBTB8OSQ8IWT0 167 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 GPR137CQ8N3F9 429 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 TPRX1Q8N7U7 411 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 ZNF485Q8NCK3 441 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 BPIFCQ8NFQ6 507 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 OR4F6Q8NGB9 312 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 OR9A1PQ8NGU1 263 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 SETD7Q8WTS6 366 aaKnown RBP3.3□□□□□ -1.88
XPA-203ENST00000485042 FAM222BQ8WU58 562 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 SGK3Q96BR1 496 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 C12orf43Q96C57 262 aaKnown RBP3.3□□□□□ -1.88
XPA-203ENST00000485042 ROPN1LQ96C74 230 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 CCDC124Q96CT7 223 aaKnown RBP3.3□□□□□ -1.88
XPA-203ENST00000485042 TM4SF19Q96DZ7 209 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 CCDC126Q96EE4 140 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 OXGR1Q96P68 337 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 KIR2DL4Q99706 377 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 HOPXQ9BPY8 73 aaPredicted RBP3.3□□□□□ -1.88
XPA-203ENST00000485042 KCNS3Q9BQ31 491 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 MRPL37Q9BZE1 423 aaKnown RBP3.3□□□□□ -1.88
XPA-203ENST00000485042 ACTR6Q9GZN1 396 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 Q9H3A6 140 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 FOLH1BQ9HBA9 442 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 SPACA1Q9HBV2 294 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 EML4Q9HC35 981 aaKnown RBP3.3□□□□□ -1.88
XPA-203ENST00000485042 STMN3Q9NZ72 180 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 ATPIF1Q9UII2 106 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 PRELID1Q9Y255 219 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 AP3M1Q9Y2T2 418 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 NEUROG3Q9Y4Z2 214 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 ZNF462Q96JM2 2506 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 COL12A1Q99715 3063 aa3.3□□□□□ -1.88
XPA-203ENST00000485042 PLXNA2O75051 1894 aa3.29□□□□□ -1.88
XPA-203ENST00000485042 COL5A1P20908 1838 aaPredicted RBP3.29□□□□□ -1.88
XPA-203ENST00000485042 IGHV1OR15-1A0A075B7D0 117 aa3.29□□□□□ -1.88
XPA-203ENST00000485042 IGHV7-81A0A0B4J1V7 117 aa3.29□□□□□ -1.88
XPA-203ENST00000485042 A0A1B0GU03 582 aa3.29□□□□□ -1.88
XPA-203ENST00000485042 A0A1W2PPV9 198 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms