RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 MRPS10P82664 201 aaKnown RBP1.54□□□□□ -2.16
ITGB1-213ENST00000484088 BCL2L1Q07817 233 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 KLRB1Q12918 225 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 DAZ2Q13117 558 aaKnown RBP1.54□□□□□ -2.16
ITGB1-213ENST00000484088 SRSF6Q13247 344 aaKnown RBP1.54□□□□□ -2.16
ITGB1-213ENST00000484088 SLAMF1Q13291 335 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 GANABQ14697 944 aaKnown RBP1.54□□□□□ -2.16
ITGB1-213ENST00000484088 HERPUD1Q15011 391 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 TRIP13Q15645 432 aaPredicted RBP1.54□□□□□ -2.16
ITGB1-213ENST00000484088 KCNJ8Q15842 424 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 MAPK14Q16539 360 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 KRTAP13-3Q3SY46 172 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 TMEM176BQ3YBM2 270 aaPredicted RBP1.54□□□□□ -2.16
ITGB1-213ENST00000484088 VPS26BQ4G0F5 336 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 SFT2D3Q587I9 215 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 CARD16Q5EG05 197 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 RNASE10Q5GAN6 216 aaKnown RBP1.54□□□□□ -2.16
ITGB1-213ENST00000484088 GCSAMLQ5JQS6 135 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 DNLZQ5SXM8 178 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 IDNKQ5T6J7 187 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 OTPQ5XKR4 325 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 KCNIP4Q6PIL6 250 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 XKRXQ6PP77 449 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 TMEM220Q6QAJ8 160 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 HSD17B13Q7Z5P4 300 aaPredicted RBP1.54□□□□□ -2.16
ITGB1-213ENST00000484088 MRPL52Q86TS9 123 aaKnown RBP1.54□□□□□ -2.16
ITGB1-213ENST00000484088 ACOT1Q86TX2 421 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 MFSD6LQ8IWD5 586 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 NRMQ8IXM6 262 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 HS3ST5Q8IZT8 346 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 PGAM4Q8N0Y7 254 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 PUSL1Q8N0Z8 303 aaKnown RBP1.54□□□□□ -2.16
ITGB1-213ENST00000484088 DHRSXQ8N5I4 330 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 ZNF283Q8N7M2 679 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 FAM86B1Q8N7N1 296 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 NKAPP1Q8N9T2 125 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 CYB561A3Q8NBI2 242 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 INO80EQ8NBZ0 244 aaPredicted RBP1.54□□□□□ -2.16
ITGB1-213ENST00000484088 ZNF738Q8NE65 137 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 PXT1Q8NFP0 134 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 STXBP6Q8NFX7 210 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 OR7G2Q8NG99 324 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 OR52I1Q8NGK6 324 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 OR5L1Q8NGL2 311 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 OR9G4Q8NGQ1 327 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 OR5AK3PQ8NH89 298 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 MARCH1Q8TCQ1 289 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 CXorf40AQ8TE69 158 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 CA5BP1Q8WTZ4 195 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 SKA2Q8WVK7 121 aaPredicted RBP1.54□□□□□ -2.16
ITGB1-213ENST00000484088 DNAJB3Q8WWF6 145 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 DNAJC9Q8WXX5 260 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 UFD1Q92890 307 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 NEIL2Q969S2 332 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 TBRG4Q969Z0 631 aaKnown RBP eCLIP1.54□□□□□ -2.162e-6■■■■■ 27.5
ITGB1-213ENST00000484088 EXOSC8Q96B26 276 aaKnown RBP1.54□□□□□ -2.16
ITGB1-213ENST00000484088 FGGYQ96C11 551 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 DCPSQ96C86 337 aaKnown RBP1.54□□□□□ -2.16
ITGB1-213ENST00000484088 L3HYPDHQ96EM0 354 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 MRPL48Q96GC5 212 aaKnown RBP1.54□□□□□ -2.16
ITGB1-213ENST00000484088 SFRP2Q96HF1 295 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 FAM210BQ96KR6 192 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 MBOAT7Q96N66 472 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 ZFP3Q96NJ6 502 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 SERPINB11Q96P15 392 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 SERPINB12Q96P63 405 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 OXGR1Q96P68 337 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 SLC38A2Q96QD8 506 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 OR5B12Q96R08 314 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 KCNA7Q96RP8 456 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 ZNF426Q9BUY5 554 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 PARD6GQ9BYG4 376 aaPredicted RBP1.54□□□□□ -2.16
ITGB1-213ENST00000484088 ULBP2Q9BZM5 246 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 ING2Q9H160 280 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 PORCNQ9H237 461 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 ZNF430Q9H8G1 570 aaPredicted RBP1.54□□□□□ -2.16
ITGB1-213ENST00000484088 UGT1A7Q9HAW7 530 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 RHOFQ9HBH0 211 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 LYRM4Q9HD34 91 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 DAZ3Q9NR90 486 aaKnown RBP1.54□□□□□ -2.16
ITGB1-213ENST00000484088 TUBG2Q9NRH3 451 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 C1orf109Q9NX04 203 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 RSL24D1Q9UHA3 163 aaKnown RBP1.54□□□□□ -2.16
ITGB1-213ENST00000484088 PHF11Q9UIL8 331 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 RPL26L1Q9UNX3 145 aaKnown RBP1.54□□□□□ -2.16
ITGB1-213ENST00000484088 NDUFAF1Q9Y375 327 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 KPTNQ9Y664 436 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 SAR1BQ9Y6B6 198 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 CDH10Q9Y6N8 788 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 CLUHO75153 1309 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 KIAA0232Q92628 1395 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 NUP160Q12769 1436 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 FHOD3Q2V2M9 1422 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 MIA2Q96PC5 1412 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 ZNF518AQ6AHZ1 1483 aa1.54□□□□□ -2.16
ITGB1-213ENST00000484088 KBTBD11-OT1A0A1B0GTJ5 212 aa1.53□□□□□ -2.16
ITGB1-213ENST00000484088 A0A1B0GUS0 222 aa1.53□□□□□ -2.16
ITGB1-213ENST00000484088 A0A1B0GVL5 298 aa1.53□□□□□ -2.16
ITGB1-213ENST00000484088 A0A1W2PPE3 182 aa1.53□□□□□ -2.16
ITGB1-213ENST00000484088 A0A1W2PRD5 423 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms