RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 ABOP16442 354 aa22.85■■□□□ 1.25
SHOX2-204ENST00000483851 ANOS1P23352 680 aa22.85■■□□□ 1.25
SHOX2-204ENST00000483851 HOXD11P31277 338 aaPredicted RBP22.85■■□□□ 1.25
SHOX2-204ENST00000483851 POU3F4P49335 361 aa22.85■■□□□ 1.25
SHOX2-204ENST00000483851 KLF9Q13886 244 aaPredicted RBP22.85■■□□□ 1.25
SHOX2-204ENST00000483851 GFOD2Q3B7J2 385 aa22.85■■□□□ 1.25
SHOX2-204ENST00000483851 C2orf76Q3KRA6 126 aa22.85■■□□□ 1.25
SHOX2-204ENST00000483851 C9orf135Q5VTT2 229 aa22.85■■□□□ 1.25
SHOX2-204ENST00000483851 FAM180AQ6UWF9 173 aa22.85■■□□□ 1.25
SHOX2-204ENST00000483851 UTS2BQ765I0 119 aa22.85■■□□□ 1.25
SHOX2-204ENST00000483851 JAGN1Q8N5M9 183 aa22.85■■□□□ 1.25
SHOX2-204ENST00000483851 OR51D1Q8NGF3 324 aa22.85■■□□□ 1.25
SHOX2-204ENST00000483851 C7orf50Q9BRJ6 194 aaKnown RBP22.85■■□□□ 1.25
SHOX2-204ENST00000483851 ITGB1BP2Q9UKP3 347 aa22.85■■□□□ 1.25
SHOX2-204ENST00000483851 MRPS7Q9Y2R9 242 aaKnown RBP22.85■■□□□ 1.25
SHOX2-204ENST00000483851 CACNA1GO43497 2377 aa22.85■■□□□ 1.25
SHOX2-204ENST00000483851 WDR1O75083 606 aa22.85■■□□□ 1.25
SHOX2-204ENST00000483851 MRPS10P82664 201 aaKnown RBP22.85■■□□□ 1.25
SHOX2-204ENST00000483851 SNAI3Q3KNW1 292 aa22.85■■□□□ 1.25
SHOX2-204ENST00000483851 LIX1LQ8IVB5 337 aa22.85■■□□□ 1.25
SHOX2-204ENST00000483851 TOMM5Q8N4H5 51 aa22.85■■□□□ 1.25
SHOX2-204ENST00000483851 CPEB3Q8NE35 698 aaKnown RBP22.85■■□□□ 1.25
SHOX2-204ENST00000483851 OR13C9Q8NGT0 318 aa22.85■■□□□ 1.25
SHOX2-204ENST00000483851 SOX7Q9BT81 388 aa22.85■■□□□ 1.25
SHOX2-204ENST00000483851 C1QTNF5Q9BXJ0 243 aa22.85■■□□□ 1.25
SHOX2-204ENST00000483851 TP53TG5Q9Y2B4 290 aa22.85■■□□□ 1.25
SHOX2-204ENST00000483851 ZFHX4Q86UP3 3567 aa22.85■■□□□ 1.25
SHOX2-204ENST00000483851 MBD3L4A6NDZ8 208 aaPredicted RBP22.84■■□□□ 1.25
SHOX2-204ENST00000483851 MBD3L3A6NE82 208 aaPredicted RBP22.84■■□□□ 1.25
SHOX2-204ENST00000483851 MBD3L5A6NJ08 208 aaPredicted RBP22.84■■□□□ 1.25
SHOX2-204ENST00000483851 CRHP06850 196 aa22.84■■□□□ 1.25
SHOX2-204ENST00000483851 PLP2Q04941 152 aa22.84■■□□□ 1.25
SHOX2-204ENST00000483851 DYRK1AQ13627 763 aa22.84■■□□□ 1.25
SHOX2-204ENST00000483851 EIF2S3LQ2VIR3 472 aaKnown RBP22.84■■□□□ 1.25
SHOX2-204ENST00000483851 COLCA1Q6ZS62 124 aa22.84■■□□□ 1.25
SHOX2-204ENST00000483851 KRT74Q7RTS7 529 aa22.84■■□□□ 1.25
SHOX2-204ENST00000483851 C9orf106Q8NAJ2 232 aa22.84■■□□□ 1.25
SHOX2-204ENST00000483851 MBD3L2Q8NHZ7 208 aaPredicted RBP22.84■■□□□ 1.25
SHOX2-204ENST00000483851 BOD1Q96IK1 185 aa22.84■■□□□ 1.25
SHOX2-204ENST00000483851 RHBDD3Q9Y3P4 386 aa22.84■■□□□ 1.25
SHOX2-204ENST00000483851 URB1O60287 2271 aaKnown RBP22.84■■□□□ 1.25
SHOX2-204ENST00000483851 C5orf63A6NC05 138 aa22.83■■□□□ 1.25
SHOX2-204ENST00000483851 XRCC2O43543 280 aa22.83■■□□□ 1.25
SHOX2-204ENST00000483851 HLA-HP01893 362 aa22.83■■□□□ 1.25
SHOX2-204ENST00000483851 RRAS2P62070 204 aaPredicted RBP22.83■■□□□ 1.25
SHOX2-204ENST00000483851 RAB1AP62820 205 aa22.83■■□□□ 1.25
SHOX2-204ENST00000483851 HGFACQ04756 655 aa22.83■■□□□ 1.25
SHOX2-204ENST00000483851 Q6ZT83 130 aa22.83■■□□□ 1.25
SHOX2-204ENST00000483851 CAPSLQ8WWF8 208 aa22.83■■□□□ 1.25
SHOX2-204ENST00000483851 DPAGT1Q9H3H5 408 aa22.83■■□□□ 1.25
SHOX2-204ENST00000483851 CGGBP1Q9UFW8 167 aaPredicted RBP22.83■■□□□ 1.25
SHOX2-204ENST00000483851 C7orf66A4D0T2 115 aa22.83■■□□□ 1.24
SHOX2-204ENST00000483851 HOXD4P09016 255 aaPredicted RBP22.83■■□□□ 1.24
SHOX2-204ENST00000483851 HOXB1P14653 301 aaPredicted RBP22.83■■□□□ 1.24
SHOX2-204ENST00000483851 KIR2DL2P43627 348 aaPredicted RBP22.83■■□□□ 1.24
SHOX2-204ENST00000483851 PTH2RP49190 550 aa22.83■■□□□ 1.24
SHOX2-204ENST00000483851 ZNF324BQ6AW86 544 aaPredicted RBP22.83■■□□□ 1.24
SHOX2-204ENST00000483851 NOXA1Q86UR1 476 aa22.83■■□□□ 1.24
SHOX2-204ENST00000483851 IZUMO1Q8IYV9 350 aa22.83■■□□□ 1.24
SHOX2-204ENST00000483851 AKAP1Q92667 903 aaKnown RBP eCLIP22.83■■□□□ 1.24
SHOX2-204ENST00000483851 REEP6Q96HR9 211 aa22.83■■□□□ 1.24
SHOX2-204ENST00000483851 CHST5Q9GZS9 411 aa22.83■■□□□ 1.24
SHOX2-204ENST00000483851 CD83Q01151 205 aa22.82■■□□□ 1.24
SHOX2-204ENST00000483851 ZNF585AQ6P3V2 769 aa22.82■■□□□ 1.24
SHOX2-204ENST00000483851 GCNT2Q8N0V5 402 aa22.82■■□□□ 1.24
SHOX2-204ENST00000483851 OR5AS1Q8N127 324 aa22.82■■□□□ 1.24
SHOX2-204ENST00000483851 OR52N4Q8NGI2 321 aa22.82■■□□□ 1.24
SHOX2-204ENST00000483851 BEX2Q9BXY8 128 aa22.82■■□□□ 1.24
SHOX2-204ENST00000483851 B3GNT2Q9NY97 397 aa22.82■■□□□ 1.24
SHOX2-204ENST00000483851 RBMX2Q9Y388 322 aaKnown RBP22.82■■□□□ 1.24
SHOX2-204ENST00000483851 NUBP2Q9Y5Y2 271 aa22.82■■□□□ 1.24
SHOX2-204ENST00000483851 DOCK7Q96N67 2140 aa22.82■■□□□ 1.24
SHOX2-204ENST00000483851 LDLRAD4O15165 306 aa22.81■■□□□ 1.24
SHOX2-204ENST00000483851 XRCC3O43542 346 aa22.81■■□□□ 1.24
SHOX2-204ENST00000483851 CD79AP11912 226 aa22.81■■□□□ 1.24
SHOX2-204ENST00000483851 ZNF93P35789 620 aaPredicted RBP22.81■■□□□ 1.24
SHOX2-204ENST00000483851 TMEM69Q5SWH9 247 aa22.81■■□□□ 1.24
SHOX2-204ENST00000483851 SEMA6DQ8NFY4 1073 aa22.81■■□□□ 1.24
SHOX2-204ENST00000483851 SPSB4Q96A44 273 aa22.81■■□□□ 1.24
SHOX2-204ENST00000483851 TRAF4Q9BUZ4 470 aaPredicted RBP22.81■■□□□ 1.24
SHOX2-204ENST00000483851 AUNIPQ9H7T9 357 aa22.81■■□□□ 1.24
SHOX2-204ENST00000483851 DIABLOQ9NR28 239 aa22.81■■□□□ 1.24
SHOX2-204ENST00000483851 PLSCR4Q9NRQ2 329 aa22.81■■□□□ 1.24
SHOX2-204ENST00000483851 ASPMQ8IZT6 3477 aa22.81■■□□□ 1.24
SHOX2-204ENST00000483851 LOC400499M0QZD8 3231 aa22.81■■□□□ 1.24
SHOX2-204ENST00000483851 FIGNL2A6NMB9 653 aa22.81■■□□□ 1.24
SHOX2-204ENST00000483851 BPNT1O95861 308 aa22.81■■□□□ 1.24
SHOX2-204ENST00000483851 PRF1P14222 555 aa22.81■■□□□ 1.24
SHOX2-204ENST00000483851 RAB6AP20340 208 aa22.81■■□□□ 1.24
SHOX2-204ENST00000483851 STOMP27105 288 aa22.81■■□□□ 1.24
SHOX2-204ENST00000483851 RIPPLY1Q0D2K3 151 aa22.81■■□□□ 1.24
SHOX2-204ENST00000483851 EXTL1Q92935 676 aa22.81■■□□□ 1.24
SHOX2-204ENST00000483851 CNTD2Q9H8S5 307 aa22.81■■□□□ 1.24
SHOX2-204ENST00000483851 COPZ2Q9P299 210 aa22.81■■□□□ 1.24
SHOX2-204ENST00000483851 FBLN5Q9UBX5 448 aa22.81■■□□□ 1.24
SHOX2-204ENST00000483851 A0A0A6YYH2 397 aa22.8■■□□□ 1.24
SHOX2-204ENST00000483851 TMEM272A0A1B0GTI8 110 aa22.8■■□□□ 1.24
SHOX2-204ENST00000483851 A6NJ64 397 aa22.8■■□□□ 1.24
SHOX2-204ENST00000483851 GABARAPH6UMI1 98 aa22.8■■□□□ 1.24
SHOX2-204ENST00000483851 TCRBP04435 133 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms