RNA–Protein interactions for RNA: ENST00000483684.1

COMMD3-213, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 722 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-213ENST00000483684 NRIP2Q9BQI9 281 aa2.37□□□□□ -2.03
COMMD3-213ENST00000483684 MRPL45Q9BRJ2 306 aaKnown RBP2.37□□□□□ -2.03
COMMD3-213ENST00000483684 YIPF3Q9GZM5 350 aa2.37□□□□□ -2.03
COMMD3-213ENST00000483684 CHRNA10Q9GZZ6 450 aa2.37□□□□□ -2.03
COMMD3-213ENST00000483684 C20orf85Q9H1P6 137 aa2.37□□□□□ -2.03
COMMD3-213ENST00000483684 C1orf198Q9H425 327 aa2.37□□□□□ -2.03
COMMD3-213ENST00000483684 C11orf49Q9H6J7 331 aa2.37□□□□□ -2.03
COMMD3-213ENST00000483684 FOLH1BQ9HBA9 442 aa2.37□□□□□ -2.03
COMMD3-213ENST00000483684 PLGRKTQ9HBL7 147 aa2.37□□□□□ -2.03
COMMD3-213ENST00000483684 NECAP2Q9NVZ3 263 aa2.37□□□□□ -2.03
COMMD3-213ENST00000483684 NXT1Q9UKK6 140 aaKnown RBP2.37□□□□□ -2.03
COMMD3-213ENST00000483684 COPS3Q9UNS2 423 aa2.37□□□□□ -2.03
COMMD3-213ENST00000483684 TSSC4Q9Y5U2 329 aaPredicted RBP2.37□□□□□ -2.03
COMMD3-213ENST00000483684 URGCP-MRPS24S4R325 110 aa2.37□□□□□ -2.03
COMMD3-213ENST00000483684 WDR7Q9Y4E6 1490 aa2.37□□□□□ -2.03
COMMD3-213ENST00000483684 ADGRA3Q8IWK6 1321 aa2.37□□□□□ -2.03
COMMD3-213ENST00000483684 RTL9Q8NET4 1388 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 PLEKHH1Q9ULM0 1364 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 SCAPERQ9BY12 1400 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 IGHV3OR16-13A0A075B7E8 117 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 IGHV1OR21-1A0A087WYE8 117 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 A0A096LNJ9 63 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 IGHV3-64DA0A0J9YX35 117 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 A0A1W2PQ67 120 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 ZNF233A6NK53 670 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 E7EWF7 191 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 F8W036 122 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 M0QXV9 152 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 SLC22A1O15245 554 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 TNFSF13O75888 250 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 CCNKO75909 580 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 AQP8O94778 261 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 LYPLA2O95372 231 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 PLEKHA8P1O95397 391 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 SLC25A27O95847 323 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 RPN2P04844 631 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 IFNW1P05000 195 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 CD3GP09693 182 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 CTXN2P0C2S0 81 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 SLC35E2BP0CK96 405 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 GIMD1P0DJR0 217 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 COX4I1P13073 169 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 ABOP16442 354 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 CD36P16671 472 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 PSMC3P17980 439 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 TBPP20226 339 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 S100PP25815 95 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 G0S2P27469 103 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 PSMB5P28074 263 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 CRABP1P29762 137 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 OMPP47874 163 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 RFX3P48380 749 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 TGM4P49221 684 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 ATP6V0D1P61421 351 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 RPS15AP62244 130 aaKnown RBP2.36□□□□□ -2.03
COMMD3-213ENST00000483684 ADARB1P78563 741 aaKnown RBP2.36□□□□□ -2.03
COMMD3-213ENST00000483684 FLI1Q01543 452 aaPredicted RBP2.36□□□□□ -2.03
COMMD3-213ENST00000483684 TGFBR3Q03167 851 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 KRR1Q13601 381 aaKnown RBP2.36□□□□□ -2.03
COMMD3-213ENST00000483684 GGTLC2Q14390 218 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 ARL6IP1Q15041 203 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 PDK2Q15119 407 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 ZNHIT3Q15649 155 aaPredicted RBP2.36□□□□□ -2.03
COMMD3-213ENST00000483684 GUK1Q16774 197 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 EXOC3L4Q17RC7 722 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 CHRFAM7AQ494W8 412 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 GPR107Q5VW38 600 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 HACD4Q5VWC8 232 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 TIGD3Q6B0B8 471 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 APOBEC3HQ6NTF7 200 aaKnown RBP2.36□□□□□ -2.03
COMMD3-213ENST00000483684 TRIM40Q6P9F5 258 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 SPESP1Q6UW49 350 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 IFT20Q8IY31 132 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 RDH10Q8IZV5 341 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 CYP4Z2PQ8N1L4 340 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 TMEM35BQ8NCS4 154 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 OR6X1Q8NH79 312 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 LYPD6BQ8NI32 183 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 TCP10LQ8TDR4 215 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 STMN2Q93045 179 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 CCDC126Q96EE4 140 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 CMTM7Q96FZ5 175 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 RILPQ96NA2 401 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 TMEM59Q9BXS4 323 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 ACTR3CQ9C0K3 210 aaPredicted RBP2.36□□□□□ -2.03
COMMD3-213ENST00000483684 TOLLIPQ9H0E2 274 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 ALX4Q9H161 411 aaPredicted RBP2.36□□□□□ -2.03
COMMD3-213ENST00000483684 METTL9Q9H1A3 318 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 SLC38A1Q9H2H9 487 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 ASCL3Q9NQ33 180 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 SAMSN1Q9NSI8 373 aaKnown RBP2.36□□□□□ -2.03
COMMD3-213ENST00000483684 GIN1Q9NXP7 522 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 ENOPH1Q9UHY7 261 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 C3orf18Q9UK00 162 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 RCL1Q9Y2P8 373 aaKnown RBP2.36□□□□□ -2.03
COMMD3-213ENST00000483684 PCDH11XQ9BZA7 1347 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 KIF15Q9NS87 1388 aa2.36□□□□□ -2.03
COMMD3-213ENST00000483684 CNTLNQ9NXG0 1405 aa2.35□□□□□ -2.03
COMMD3-213ENST00000483684 ERCC6Q03468 1493 aa2.35□□□□□ -2.03
COMMD3-213ENST00000483684 CECR2Q9BXF3 1484 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms