RNA–Protein interactions for RNA: ENST00000483544.1

LINC00477-201, long intergenic non-protein coding RNA 477, humanhuman

TSL 2 BASIC

Gene LINC00477, Length 1,710 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477-201ENST00000483544 SLC17A2O00624 439 aa11.13□□□□□ -0.63
LINC00477-201ENST00000483544 CREBL2O60519 120 aaPredicted RBP11.13□□□□□ -0.63
LINC00477-201ENST00000483544 SPDEFO95238 335 aa11.13□□□□□ -0.63
LINC00477-201ENST00000483544 AHSA1O95433 338 aa11.13□□□□□ -0.63
LINC00477-201ENST00000483544 ADRA2CP18825 462 aa11.13□□□□□ -0.63
LINC00477-201ENST00000483544 NFYBP25208 207 aa11.13□□□□□ -0.63
LINC00477-201ENST00000483544 C1orf140Q5VVS0 124 aa11.13□□□□□ -0.63
LINC00477-201ENST00000483544 NKAIN2Q5VXU1 208 aa11.13□□□□□ -0.63
LINC00477-201ENST00000483544 ZNF626Q68DY1 528 aa11.13□□□□□ -0.63
LINC00477-201ENST00000483544 ETFRF1Q6IPR1 90 aa11.13□□□□□ -0.63
LINC00477-201ENST00000483544 CDPF1Q6NVV7 123 aa11.13□□□□□ -0.63
LINC00477-201ENST00000483544 OR2W3Q7Z3T1 314 aa11.13□□□□□ -0.63
LINC00477-201ENST00000483544 C9orf40Q8IXQ3 194 aa11.13□□□□□ -0.63
LINC00477-201ENST00000483544 IZUMO1Q8IYV9 350 aa11.13□□□□□ -0.63
LINC00477-201ENST00000483544 Q8NFD4 153 aa11.13□□□□□ -0.63
LINC00477-201ENST00000483544 SEMA6DQ8NFY4 1073 aa11.13□□□□□ -0.63
LINC00477-201ENST00000483544 OR1S2Q8NGQ3 325 aa11.13□□□□□ -0.63
LINC00477-201ENST00000483544 ST8SIA1Q92185 356 aa11.13□□□□□ -0.63
LINC00477-201ENST00000483544 TSLPQ969D9 159 aa11.13□□□□□ -0.63
LINC00477-201ENST00000483544 TMEM106AQ96A25 262 aa11.13□□□□□ -0.63
LINC00477-201ENST00000483544 SGCZQ96LD1 299 aa11.13□□□□□ -0.63
LINC00477-201ENST00000483544 GAL3ST4Q96RP7 486 aa11.13□□□□□ -0.63
LINC00477-201ENST00000483544 SYT4Q9H2B2 425 aa11.13□□□□□ -0.63
LINC00477-201ENST00000483544 SLCO5A1Q9H2Y9 848 aa11.13□□□□□ -0.63
LINC00477-201ENST00000483544 LMAN1LQ9HAT1 526 aa11.13□□□□□ -0.63
LINC00477-201ENST00000483544 NOX3Q9HBY0 568 aa11.13□□□□□ -0.63
LINC00477-201ENST00000483544 CKLFQ9UBR5 152 aa11.13□□□□□ -0.63
LINC00477-201ENST00000483544 SRPK3Q9UPE1 567 aa11.13□□□□□ -0.63
LINC00477-201ENST00000483544 LAMA2P24043 3122 aaKnown RBP11.13□□□□□ -0.63
LINC00477-201ENST00000483544 IGHV1OR21-1A0A087WYE8 117 aa11.12□□□□□ -0.63
LINC00477-201ENST00000483544 IGLV1-36A0A0B4J1U3 117 aa11.12□□□□□ -0.63
LINC00477-201ENST00000483544 LOC100289279A0A1B0GTE1 492 aa11.12□□□□□ -0.63
LINC00477-201ENST00000483544 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.12□□□□□ -0.63
LINC00477-201ENST00000483544 TVP23AA6NH52 213 aa11.12□□□□□ -0.63
LINC00477-201ENST00000483544 CD79AP11912 226 aa11.12□□□□□ -0.63
LINC00477-201ENST00000483544 ACKR3P25106 362 aa11.12□□□□□ -0.63
LINC00477-201ENST00000483544 HGFACQ04756 655 aa11.12□□□□□ -0.63
LINC00477-201ENST00000483544 DMWDQ09019 674 aa11.12□□□□□ -0.63
LINC00477-201ENST00000483544 NSDHLQ15738 373 aa11.12□□□□□ -0.63
LINC00477-201ENST00000483544 RAB11BQ15907 218 aa11.12□□□□□ -0.63
LINC00477-201ENST00000483544 SCGB2B2Q4G0G5 96 aa11.12□□□□□ -0.63
LINC00477-201ENST00000483544 ZNF385CQ66K41 422 aaPredicted RBP11.12□□□□□ -0.63
LINC00477-201ENST00000483544 GLT8D1Q68CQ7 371 aa11.12□□□□□ -0.63
LINC00477-201ENST00000483544 LANCL3Q6ZV70 420 aa11.12□□□□□ -0.63
LINC00477-201ENST00000483544 GPR119Q8TDV5 335 aa11.12□□□□□ -0.63
LINC00477-201ENST00000483544 C5orf34Q96MH7 638 aa11.12□□□□□ -0.63
LINC00477-201ENST00000483544 CLCC1Q96S66 551 aa11.12□□□□□ -0.63
LINC00477-201ENST00000483544 NRIP2Q9BQI9 281 aa11.12□□□□□ -0.63
LINC00477-201ENST00000483544 SNHG12Q9BXW3 62 aa11.12□□□□□ -0.63
LINC00477-201ENST00000483544 CHIAQ9BZP6 476 aa11.12□□□□□ -0.63
LINC00477-201ENST00000483544 MFFQ9GZY8 342 aa11.12□□□□□ -0.63
LINC00477-201ENST00000483544 ELOVL3Q9HB03 270 aa11.12□□□□□ -0.63
LINC00477-201ENST00000483544 CHST11Q9NPF2 352 aa11.12□□□□□ -0.63
LINC00477-201ENST00000483544 FAM212BQ9NTI7 297 aaPredicted RBP11.12□□□□□ -0.63
LINC00477-201ENST00000483544 TMEM100Q9NV29 134 aa11.12□□□□□ -0.63
LINC00477-201ENST00000483544 EXPH5Q8NEV8 1989 aa11.12□□□□□ -0.63
LINC00477-201ENST00000483544 TMEM265A0A087WTH1 108 aa11.12□□□□□ -0.63
LINC00477-201ENST00000483544 UBE2QL1A1L167 161 aa11.12□□□□□ -0.63
LINC00477-201ENST00000483544 GGT3PA6NGU5 568 aa11.12□□□□□ -0.63
LINC00477-201ENST00000483544 TMEM238C9JI98 176 aa11.12□□□□□ -0.63
LINC00477-201ENST00000483544 PLPP3O14495 311 aa11.12□□□□□ -0.63
LINC00477-201ENST00000483544 PIAS2O75928 621 aa11.12□□□□□ -0.63
LINC00477-201ENST00000483544 NUDT14O95848 222 aa11.12□□□□□ -0.63
LINC00477-201ENST00000483544 MELTFP08582 738 aa11.12□□□□□ -0.63
LINC00477-201ENST00000483544 HTR2CP28335 458 aa11.12□□□□□ -0.63
LINC00477-201ENST00000483544 OR1D4P47884 311 aa11.12□□□□□ -0.63
LINC00477-201ENST00000483544 SOX2P48431 317 aa11.12□□□□□ -0.63
LINC00477-201ENST00000483544 GSK3AP49840 483 aa11.12□□□□□ -0.63
LINC00477-201ENST00000483544 ACTBP60709 375 aa11.12□□□□□ -0.63
LINC00477-201ENST00000483544 ACTG1P63261 375 aa11.12□□□□□ -0.63
LINC00477-201ENST00000483544 ACKR1Q16570 336 aa11.12□□□□□ -0.63
LINC00477-201ENST00000483544 DEFB133Q30KQ1 61 aa11.12□□□□□ -0.63
LINC00477-201ENST00000483544 TRIM61Q5EBN2 209 aa11.12□□□□□ -0.63
LINC00477-201ENST00000483544 WDR38Q5JTN6 314 aa11.12□□□□□ -0.63
LINC00477-201ENST00000483544 DMRTA1Q5VZB9 504 aa11.12□□□□□ -0.63
LINC00477-201ENST00000483544 SFRP4Q6FHJ7 346 aaPredicted RBP11.12□□□□□ -0.63
LINC00477-201ENST00000483544 EIF5AL1Q6IS14 154 aaKnown RBP11.12□□□□□ -0.63
LINC00477-201ENST00000483544 WDR74Q6RFH5 385 aaPredicted RBP11.12□□□□□ -0.63
LINC00477-201ENST00000483544 C1orf122Q6ZSJ8 110 aa11.12□□□□□ -0.63
LINC00477-201ENST00000483544 Q6ZTK2 550 aa11.12□□□□□ -0.63
LINC00477-201ENST00000483544 MARCH3Q86UD3 253 aa11.12□□□□□ -0.63
LINC00477-201ENST00000483544 MCEMP1Q8IX19 187 aa11.12□□□□□ -0.63
LINC00477-201ENST00000483544 KCNRGQ8N5I3 272 aa11.12□□□□□ -0.63
LINC00477-201ENST00000483544 OR52N4Q8NGI2 321 aa11.12□□□□□ -0.63
LINC00477-201ENST00000483544 OR10D4PQ8NGN7 298 aa11.12□□□□□ -0.63
LINC00477-201ENST00000483544 TSEN15Q8WW01 171 aaKnown RBP11.12□□□□□ -0.63
LINC00477-201ENST00000483544 PTX4Q96A99 478 aa11.12□□□□□ -0.63
LINC00477-201ENST00000483544 ATG101Q9BSB4 218 aa11.12□□□□□ -0.63
LINC00477-201ENST00000483544 PHF7Q9BWX1 381 aaPredicted RBP11.12□□□□□ -0.63
LINC00477-201ENST00000483544 PRO1933Q9H354 126 aa11.12□□□□□ -0.63
LINC00477-201ENST00000483544 UPB1Q9UBR1 384 aa11.12□□□□□ -0.63
LINC00477-201ENST00000483544 PUS1Q9Y606 427 aaKnown RBP eCLIP11.12□□□□□ -0.63
LINC00477-201ENST00000483544 POMT1Q9Y6A1 747 aa11.12□□□□□ -0.63
LINC00477-201ENST00000483544 SLCO1B1Q9Y6L6 691 aa11.12□□□□□ -0.63
LINC00477-201ENST00000483544 ANKUB1A6NFN9 424 aa11.11□□□□□ -0.63
LINC00477-201ENST00000483544 DVL1O14640 695 aa11.11□□□□□ -0.63
LINC00477-201ENST00000483544 ARPC1BO15143 372 aaKnown RBP11.11□□□□□ -0.63
LINC00477-201ENST00000483544 BCL2L11O43521 198 aa11.11□□□□□ -0.63
LINC00477-201ENST00000483544 OR2F2O95006 317 aa11.11□□□□□ -0.63
LINC00477-201ENST00000483544 HLA-DQA2P01906 255 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms