RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 EGR4Q05215 589 aa10.5□□□□□ -0.73
VTI1A-205ENST00000483122 SRSF5Q13243 272 aaKnown RBP10.5□□□□□ -0.73
VTI1A-205ENST00000483122 ELOBQ15370 118 aa10.5□□□□□ -0.73
VTI1A-205ENST00000483122 PCK2Q16822 640 aa10.5□□□□□ -0.73
VTI1A-205ENST00000483122 C21orf62-AS1Q17RA5 79 aa10.5□□□□□ -0.73
VTI1A-205ENST00000483122 MAMDC2Q7Z304 686 aaPredicted RBP10.5□□□□□ -0.73
VTI1A-205ENST00000483122 SFTPA1Q8IWL2 248 aa10.5□□□□□ -0.73
VTI1A-205ENST00000483122 ZNF524Q96C55 264 aa10.5□□□□□ -0.73
VTI1A-205ENST00000483122 MVB12AQ96EY5 273 aa10.5□□□□□ -0.73
VTI1A-205ENST00000483122 POM121Q96HA1 1249 aa10.5□□□□□ -0.73
VTI1A-205ENST00000483122 SPACA7Q96KW9 195 aa10.5□□□□□ -0.73
VTI1A-205ENST00000483122 TP53TG5Q9Y2B4 290 aa10.5□□□□□ -0.73
VTI1A-205ENST00000483122 EMC9Q9Y3B6 208 aa10.5□□□□□ -0.73
VTI1A-205ENST00000483122 LRP12Q9Y561 859 aa10.5□□□□□ -0.73
VTI1A-205ENST00000483122 ZNF724A8MTY0 619 aa10.49□□□□□ -0.73
VTI1A-205ENST00000483122 C5orf67F2Z3F1 127 aa10.49□□□□□ -0.73
VTI1A-205ENST00000483122 TRGC2P03986 189 aa10.49□□□□□ -0.73
VTI1A-205ENST00000483122 SFTPCP11686 197 aa10.49□□□□□ -0.73
VTI1A-205ENST00000483122 RPS2P15880 293 aaKnown RBP10.49□□□□□ -0.73
VTI1A-205ENST00000483122 TBPP20226 339 aa10.49□□□□□ -0.73
VTI1A-205ENST00000483122 ERVFRD-1P60508 538 aa10.49□□□□□ -0.73
VTI1A-205ENST00000483122 QRFPP83859 136 aa10.49□□□□□ -0.73
VTI1A-205ENST00000483122 ZP2Q05996 745 aa10.49□□□□□ -0.73
VTI1A-205ENST00000483122 OR8G1Q15617 311 aa10.49□□□□□ -0.73
VTI1A-205ENST00000483122 SOHLH1Q5JUK2 328 aa10.49□□□□□ -0.73
VTI1A-205ENST00000483122 ZNF385CQ66K41 422 aaPredicted RBP10.49□□□□□ -0.73
VTI1A-205ENST00000483122 SLC18B1Q6NT16 456 aa10.49□□□□□ -0.73
VTI1A-205ENST00000483122 NPSR1Q6W5P4 371 aa10.49□□□□□ -0.73
VTI1A-205ENST00000483122 ZNF101Q8IZC7 436 aa10.49□□□□□ -0.73
VTI1A-205ENST00000483122 KDM8Q8N371 416 aa10.49□□□□□ -0.73
VTI1A-205ENST00000483122 OR52N4Q8NGI2 321 aa10.49□□□□□ -0.73
VTI1A-205ENST00000483122 LCN9Q8WX39 176 aa10.49□□□□□ -0.73
VTI1A-205ENST00000483122 C8orf44Q96CB5 159 aa10.49□□□□□ -0.73
VTI1A-205ENST00000483122 TM4SF19Q96DZ7 209 aa10.49□□□□□ -0.73
VTI1A-205ENST00000483122 KTI12Q96EK9 354 aaPredicted RBP10.49□□□□□ -0.73
VTI1A-205ENST00000483122 MRPL37Q9BZE1 423 aaKnown RBP10.49□□□□□ -0.73
VTI1A-205ENST00000483122 NKX2-4Q9H2Z4 354 aa10.49□□□□□ -0.73
VTI1A-205ENST00000483122 SRMSQ9H3Y6 488 aa10.49□□□□□ -0.73
VTI1A-205ENST00000483122 WFDC1Q9HC57 220 aa10.49□□□□□ -0.73
VTI1A-205ENST00000483122 PILRAQ9UKJ1 303 aa10.49□□□□□ -0.73
VTI1A-205ENST00000483122 HHLA2Q9UM44 414 aa10.49□□□□□ -0.73
VTI1A-205ENST00000483122 COLQQ9Y215 455 aaPredicted RBP10.49□□□□□ -0.73
VTI1A-205ENST00000483122 SLC5A6Q9Y289 635 aa10.49□□□□□ -0.73
VTI1A-205ENST00000483122 LSM5Q9Y4Y9 91 aaKnown RBP10.49□□□□□ -0.73
VTI1A-205ENST00000483122 SERINC4A6NH21 518 aa10.49□□□□□ -0.73
VTI1A-205ENST00000483122 C11orf98E9PRG8 122 aa10.49□□□□□ -0.73
VTI1A-205ENST00000483122 CYR61O00622 381 aa10.49□□□□□ -0.73
VTI1A-205ENST00000483122 QDPRP09417 244 aa10.49□□□□□ -0.73
VTI1A-205ENST00000483122 IGFALSP35858 605 aa10.49□□□□□ -0.73
VTI1A-205ENST00000483122 CCR4P51679 360 aa10.49□□□□□ -0.73
VTI1A-205ENST00000483122 SLC35A1P78382 337 aa10.49□□□□□ -0.73
VTI1A-205ENST00000483122 UBE2V2Q15819 145 aa10.49□□□□□ -0.73
VTI1A-205ENST00000483122 IAH1Q2TAA2 248 aaPredicted RBP10.49□□□□□ -0.73
VTI1A-205ENST00000483122 DNLZQ5SXM8 178 aa10.49□□□□□ -0.73
VTI1A-205ENST00000483122 C1QL3Q5VWW1 255 aa10.49□□□□□ -0.73
VTI1A-205ENST00000483122 RNF144BQ7Z419 303 aa10.49□□□□□ -0.73
VTI1A-205ENST00000483122 SUMF2Q8NBJ7 301 aa10.49□□□□□ -0.73
VTI1A-205ENST00000483122 OR13G1Q8NGZ3 307 aa10.49□□□□□ -0.73
VTI1A-205ENST00000483122 OR2A5Q96R48 311 aa10.49□□□□□ -0.73
VTI1A-205ENST00000483122 KLHDC3Q9BQ90 382 aa10.49□□□□□ -0.73
VTI1A-205ENST00000483122 G6PC3Q9BUM1 346 aa10.49□□□□□ -0.73
VTI1A-205ENST00000483122 ABHD6Q9BV23 337 aa10.49□□□□□ -0.73
VTI1A-205ENST00000483122 SH3BGRL3Q9H299 93 aa10.49□□□□□ -0.73
VTI1A-205ENST00000483122 PTGES2Q9H7Z7 377 aa10.49□□□□□ -0.73
VTI1A-205ENST00000483122 LUZP4Q9P127 313 aa10.49□□□□□ -0.73
VTI1A-205ENST00000483122 A0A0A6YYD4 124 aa10.48□□□□□ -0.73
VTI1A-205ENST00000483122 CLDN4O14493 209 aa10.48□□□□□ -0.73
VTI1A-205ENST00000483122 PRKNO60260 465 aaPredicted RBP10.48□□□□□ -0.73
VTI1A-205ENST00000483122 KAT7O95251 611 aa10.48□□□□□ -0.73
VTI1A-205ENST00000483122 PRH1P02810 166 aa10.48□□□□□ -0.73
VTI1A-205ENST00000483122 S1PR1P21453 382 aa10.48□□□□□ -0.73
VTI1A-205ENST00000483122 FCARP24071 287 aa10.48□□□□□ -0.73
VTI1A-205ENST00000483122 FPR2P25090 351 aa10.48□□□□□ -0.73
VTI1A-205ENST00000483122 LMO1P25800 156 aa10.48□□□□□ -0.73
VTI1A-205ENST00000483122 IL2RGP31785 369 aa10.48□□□□□ -0.73
VTI1A-205ENST00000483122 NKX6-1P78426 367 aaPredicted RBP10.48□□□□□ -0.73
VTI1A-205ENST00000483122 BIKQ13323 160 aa10.48□□□□□ -0.73
VTI1A-205ENST00000483122 ZNF77Q15935 545 aa10.48□□□□□ -0.73
VTI1A-205ENST00000483122 HNRNPA1L2Q32P51 320 aaKnown RBP10.48□□□□□ -0.73
VTI1A-205ENST00000483122 EMC4Q5J8M3 183 aa10.48□□□□□ -0.73
VTI1A-205ENST00000483122 OR2T2Q6IF00 324 aa10.48□□□□□ -0.73
VTI1A-205ENST00000483122 LCN10Q6JVE6 187 aa10.48□□□□□ -0.73
VTI1A-205ENST00000483122 COX15Q7KZN9 410 aa10.48□□□□□ -0.73
VTI1A-205ENST00000483122 DPPA2Q7Z7J5 298 aa10.48□□□□□ -0.73
VTI1A-205ENST00000483122 ATG4DQ86TL0 474 aaPredicted RBP10.48□□□□□ -0.73
VTI1A-205ENST00000483122 LIPHQ8WWY8 451 aa10.48□□□□□ -0.73
VTI1A-205ENST00000483122 HOXB13Q92826 284 aaPredicted RBP10.48□□□□□ -0.73
VTI1A-205ENST00000483122 ANKRD9Q96BM1 317 aaPredicted RBP10.48□□□□□ -0.73
VTI1A-205ENST00000483122 RAB39BQ96DA2 213 aa10.48□□□□□ -0.73
VTI1A-205ENST00000483122 PRRX2Q99811 253 aa10.48□□□□□ -0.73
VTI1A-205ENST00000483122 ATG101Q9BSB4 218 aa10.48□□□□□ -0.73
VTI1A-205ENST00000483122 LMF2Q9BU23 707 aaKnown RBP10.48□□□□□ -0.73
VTI1A-205ENST00000483122 CRLF2Q9HC73 371 aa10.48□□□□□ -0.73
VTI1A-205ENST00000483122 TMED3Q9Y3Q3 217 aa10.48□□□□□ -0.73
VTI1A-205ENST00000483122 CEACAM18A8MTB9 384 aa10.48□□□□□ -0.73
VTI1A-205ENST00000483122 MKRN2OSH3BPM6 223 aa10.48□□□□□ -0.73
VTI1A-205ENST00000483122 P2RY10O00398 339 aa10.48□□□□□ -0.73
VTI1A-205ENST00000483122 SDCBPO00560 298 aaPredicted RBP10.48□□□□□ -0.73
VTI1A-205ENST00000483122 PHOX2AO14813 284 aa10.48□□□□□ -0.73
VTI1A-205ENST00000483122 CYB5BO43169 146 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms