RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 ISPDA4D126 451 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 OR5H15A6NDH6 313 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 FAM166BA8MTA8 275 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 IDSB3KWA1 339 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 K7EP13 123 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 GPR31O00270 319 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 CCL21O00585 134 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 NME4O00746 187 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 PHYHO14832 338 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 DLEU1O43261 78 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 SYNGR1O43759 233 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 FOXH1O75593 365 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 OR2J2O76002 312 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 TBX6O95947 436 aaPredicted RBP3.41□□□□□ -1.86
VPS41-212ENST00000482217 TFAP2AP05549 437 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 CYBAP13498 195 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 PVRP15151 417 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 MYOD1P15172 320 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 ZNF250P15622 560 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 NELFEP18615 380 aaKnown RBP3.41□□□□□ -1.86
VPS41-212ENST00000482217 OMGP23515 440 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 LOXP28300 417 aaPredicted RBP3.41□□□□□ -1.86
VPS41-212ENST00000482217 FOXN2P32314 431 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 SAA4P35542 130 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 ZFP36L2P47974 494 aaKnown RBP3.41□□□□□ -1.86
VPS41-212ENST00000482217 RAB13P51153 203 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 BRWD1-AS2P59051 145 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 NUTF2P61970 127 aaKnown RBP3.41□□□□□ -1.86
VPS41-212ENST00000482217 ELF3P78545 371 aaPredicted RBP3.41□□□□□ -1.86
VPS41-212ENST00000482217 DEFA6Q01524 100 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 SP4Q02446 784 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 RIGQ13278 110 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 FAM53BQ14153 422 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 RAB35Q15286 201 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 LRRC36Q1X8D7 754 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 SMIM21Q3B7S5 101 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 ARHGAP11BQ3KRB8 267 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 TTLL9Q3SXZ7 439 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 FAM27D1Q5T7N8 215 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 XKRXQ6PP77 449 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 STAC2Q6ZMT1 411 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 Q6ZVH6 145 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 BHLHA9Q7RTU4 235 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 PRSS41Q7RTY9 318 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 CA13Q8N1Q1 262 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 LRRC25Q8N386 305 aaPredicted RBP3.41□□□□□ -1.86
VPS41-212ENST00000482217 ZADH2Q8N4Q0 377 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 C15orf54Q8N8G6 183 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 OR6T1Q8NGN1 323 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 OR10G9Q8NGN4 311 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 COQ8AQ8NI60 647 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 GRPEL2Q8TAA5 225 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 TBCKQ8TEA7 893 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 MOCOSQ96EN8 888 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 MED8Q96G25 268 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 MAGEB18Q96M61 343 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 ALKBH3Q96Q83 286 aaPredicted RBP3.41□□□□□ -1.86
VPS41-212ENST00000482217 OR8B4Q96RC9 309 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 LPAR4Q99677 370 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 SIGMAR1Q99720 223 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 RASL11BQ9BPW5 248 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 C20orf144Q9BQM9 153 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 HES7Q9BYE0 225 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 YIPF3Q9GZM5 350 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 NAT10Q9H0A0 1025 aaKnown RBP3.41□□□□□ -1.86
VPS41-212ENST00000482217 ARV1Q9H2C2 271 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 RBKSQ9H477 322 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 REEP4Q9H6H4 257 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 NT5DC2Q9H857 520 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 SDR39U1Q9NRG7 319 aaPredicted RBP3.41□□□□□ -1.86
VPS41-212ENST00000482217 FAM206AQ9NX38 181 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 NUDT4Q9NZJ9 180 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 THYN1Q9P016 225 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 NEU3Q9UQ49 428 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 ERBINQ96RT1 1412 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 MRC2Q9UBG0 1479 aa3.41□□□□□ -1.86
VPS41-212ENST00000482217 A0A087WZ39 114 aa3.4□□□□□ -1.87
VPS41-212ENST00000482217 K7ERI5 159 aa3.4□□□□□ -1.87
VPS41-212ENST00000482217 M0QYV0 167 aa3.4□□□□□ -1.87
VPS41-212ENST00000482217 GABRPO00591 440 aa3.4□□□□□ -1.87
VPS41-212ENST00000482217 TXNDC9O14530 226 aa3.4□□□□□ -1.87
VPS41-212ENST00000482217 RAD51CO43502 376 aa3.4□□□□□ -1.87
VPS41-212ENST00000482217 FAM189A1O60320 539 aa3.4□□□□□ -1.87
VPS41-212ENST00000482217 EEDO75530 441 aaKnown RBP3.4□□□□□ -1.87
VPS41-212ENST00000482217 CNMDO75829 334 aa3.4□□□□□ -1.87
VPS41-212ENST00000482217 MT-CO2P00403 227 aa3.4□□□□□ -1.87
VPS41-212ENST00000482217 COX5AP20674 150 aa3.4□□□□□ -1.87
VPS41-212ENST00000482217 HTR1DP28221 377 aa3.4□□□□□ -1.87
VPS41-212ENST00000482217 PYCR1P32322 319 aa3.4□□□□□ -1.87
VPS41-212ENST00000482217 AKR1C3P42330 323 aa3.4□□□□□ -1.87
VPS41-212ENST00000482217 REG1BP48304 166 aa3.4□□□□□ -1.87
VPS41-212ENST00000482217 STXBP1P61764 594 aaKnown RBP3.4□□□□□ -1.87
VPS41-212ENST00000482217 PSG4Q00888 419 aa3.4□□□□□ -1.87
VPS41-212ENST00000482217 ZNF85Q03923 595 aa3.4□□□□□ -1.87
VPS41-212ENST00000482217 CD47Q08722 323 aa3.4□□□□□ -1.87
VPS41-212ENST00000482217 MFAP5Q13361 173 aa3.4□□□□□ -1.87
VPS41-212ENST00000482217 FHL1Q13642 323 aa3.4□□□□□ -1.87
VPS41-212ENST00000482217 ZNF234Q14588 700 aa3.4□□□□□ -1.87
VPS41-212ENST00000482217 GNMTQ14749 295 aa3.4□□□□□ -1.87
VPS41-212ENST00000482217 TRIP13Q15645 432 aaPredicted RBP3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms