RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 REEP1Q9H902 201 aa12.66□□□□□ -0.38
LIMS3-203ENST00000480744 MARCH7Q9H992 704 aa12.66□□□□□ -0.38
LIMS3-203ENST00000480744 SMURF1Q9HCE7 757 aa12.66□□□□□ -0.38
LIMS3-203ENST00000480744 C14orf119Q9NWQ9 140 aa12.66□□□□□ -0.38
LIMS3-203ENST00000480744 VNN3Q9NY84 501 aa12.66□□□□□ -0.38
LIMS3-203ENST00000480744 PKD1L1Q8TDX9 2849 aa12.66□□□□□ -0.38
LIMS3-203ENST00000480744 IGHV3OR15-7A0A075B7D8 119 aa12.65□□□□□ -0.38
LIMS3-203ENST00000480744 DHRS12A0PJE2 317 aa12.65□□□□□ -0.38
LIMS3-203ENST00000480744 ZNF879B4DU55 563 aa12.65□□□□□ -0.38
LIMS3-203ENST00000480744 P2RY10O00398 339 aa12.65□□□□□ -0.38
LIMS3-203ENST00000480744 GYG2O15488 501 aa12.65□□□□□ -0.38
LIMS3-203ENST00000480744 PTBP3O95758 552 aaKnown RBP12.65□□□□□ -0.38
LIMS3-203ENST00000480744 ZNF3P17036 446 aa12.65□□□□□ -0.38
LIMS3-203ENST00000480744 SLC15A1P46059 708 aa12.65□□□□□ -0.38
LIMS3-203ENST00000480744 GRB2P62993 217 aaKnown RBP12.65□□□□□ -0.38
LIMS3-203ENST00000480744 MICAQ29983 383 aa12.65□□□□□ -0.38
LIMS3-203ENST00000480744 GFOD2Q3B7J2 385 aa12.65□□□□□ -0.38
LIMS3-203ENST00000480744 METTL11BQ5VVY1 283 aa12.65□□□□□ -0.38
LIMS3-203ENST00000480744 OR2T5Q6IEZ7 315 aa12.65□□□□□ -0.38
LIMS3-203ENST00000480744 DHFR2Q86XF0 187 aa12.65□□□□□ -0.38
LIMS3-203ENST00000480744 ERI1Q8IV48 349 aaKnown RBP12.65□□□□□ -0.38
LIMS3-203ENST00000480744 GCSAMQ8N6F7 178 aa12.65□□□□□ -0.38
LIMS3-203ENST00000480744 OR6N2Q8NGY6 317 aa12.65□□□□□ -0.38
LIMS3-203ENST00000480744 OR2T29Q8NH02 315 aa12.65□□□□□ -0.38
LIMS3-203ENST00000480744 MUC13Q9H3R2 512 aa12.65□□□□□ -0.38
LIMS3-203ENST00000480744 MAGIXQ9H6Y5 334 aa12.65□□□□□ -0.38
LIMS3-203ENST00000480744 ZNF696Q9H7X3 374 aa12.65□□□□□ -0.38
LIMS3-203ENST00000480744 MED20Q9H944 212 aa12.65□□□□□ -0.38
LIMS3-203ENST00000480744 DNAJC27Q9NZQ0 273 aa12.65□□□□□ -0.38
LIMS3-203ENST00000480744 FAM181BA6NEQ2 426 aa12.64□□□□□ -0.39
LIMS3-203ENST00000480744 FAM183AA6NL82 134 aa12.64□□□□□ -0.39
LIMS3-203ENST00000480744 POM121CA8CG34 1229 aa12.64□□□□□ -0.39
LIMS3-203ENST00000480744 SRRM5B3KS81 715 aa12.64□□□□□ -0.39
LIMS3-203ENST00000480744 NDUFA2O43678 99 aa12.64□□□□□ -0.39
LIMS3-203ENST00000480744 CRYBA1P05813 215 aa12.64□□□□□ -0.39
LIMS3-203ENST00000480744 LIPFP07098 398 aa12.64□□□□□ -0.39
LIMS3-203ENST00000480744 BLVRAP53004 296 aa12.64□□□□□ -0.39
LIMS3-203ENST00000480744 PCK2Q16822 640 aa12.64□□□□□ -0.39
LIMS3-203ENST00000480744 DNAL1Q4LDG9 190 aa12.64□□□□□ -0.39
LIMS3-203ENST00000480744 FAM98BQ52LJ0 330 aaKnown RBP12.64□□□□□ -0.39
LIMS3-203ENST00000480744 TEX30Q5JUR7 227 aa12.64□□□□□ -0.39
LIMS3-203ENST00000480744 FAM57BQ71RH2 274 aa12.64□□□□□ -0.39
LIMS3-203ENST00000480744 SLC16A9Q7RTY1 509 aa12.64□□□□□ -0.39
LIMS3-203ENST00000480744 DPY19L4Q7Z388 723 aa12.64□□□□□ -0.39
LIMS3-203ENST00000480744 FAM90A1Q86YD7 464 aa12.64□□□□□ -0.39
LIMS3-203ENST00000480744 IQCF1Q8N6M8 205 aa12.64□□□□□ -0.39
LIMS3-203ENST00000480744 PNLDC1Q8NA58 520 aaKnown RBP12.64□□□□□ -0.39
LIMS3-203ENST00000480744 OR10G2Q8NGC3 310 aa12.64□□□□□ -0.39
LIMS3-203ENST00000480744 TEX47Q8TBZ9 253 aa12.64□□□□□ -0.39
LIMS3-203ENST00000480744 LRRC29Q8WV35 223 aa12.64□□□□□ -0.39
LIMS3-203ENST00000480744 ST8SIA4Q92187 359 aa12.64□□□□□ -0.39
LIMS3-203ENST00000480744 REEP6Q96HR9 211 aa12.64□□□□□ -0.39
LIMS3-203ENST00000480744 WDFY2Q96P53 400 aa12.64□□□□□ -0.39
LIMS3-203ENST00000480744 TBX15Q96SF7 602 aa12.64□□□□□ -0.39
LIMS3-203ENST00000480744 INTS14Q96SY0 518 aa12.64□□□□□ -0.39
LIMS3-203ENST00000480744 DGCR6LQ9BY27 220 aa12.64□□□□□ -0.39
LIMS3-203ENST00000480744 BRD7Q9NPI1 651 aa12.64□□□□□ -0.39
LIMS3-203ENST00000480744 H3BN98 237 aa12.63□□□□□ -0.39
LIMS3-203ENST00000480744 DVL1O14640 695 aa12.63□□□□□ -0.39
LIMS3-203ENST00000480744 GSC2O15499 205 aa12.63□□□□□ -0.39
LIMS3-203ENST00000480744 DNAJC8O75937 253 aaPredicted RBP12.63□□□□□ -0.39
LIMS3-203ENST00000480744 GRK5P34947 590 aa12.63□□□□□ -0.39
LIMS3-203ENST00000480744 DDOSTP39656 456 aa12.63□□□□□ -0.39
LIMS3-203ENST00000480744 BPIFB3P59826 476 aa12.63□□□□□ -0.39
LIMS3-203ENST00000480744 ARF6P62330 175 aa12.63□□□□□ -0.39
LIMS3-203ENST00000480744 CBX1P83916 185 aa12.63□□□□□ -0.39
LIMS3-203ENST00000480744 FAM3AP98173 230 aa12.63□□□□□ -0.39
LIMS3-203ENST00000480744 FIP1L1Q6UN15 594 aaKnown RBP12.63□□□□□ -0.39
LIMS3-203ENST00000480744 Q6YL49 198 aa12.63□□□□□ -0.39
LIMS3-203ENST00000480744 BTN2A1Q7KYR7 527 aa12.63□□□□□ -0.39
LIMS3-203ENST00000480744 GATAD2BQ8WXI9 593 aa12.63□□□□□ -0.39
LIMS3-203ENST00000480744 LHX4Q969G2 390 aa12.63□□□□□ -0.39
LIMS3-203ENST00000480744 SPSB4Q96A44 273 aa12.63□□□□□ -0.39
LIMS3-203ENST00000480744 SGK3Q96BR1 496 aa12.63□□□□□ -0.39
LIMS3-203ENST00000480744 NIPSNAP1Q9BPW8 284 aa12.63□□□□□ -0.39
LIMS3-203ENST00000480744 ABHD6Q9BV23 337 aa12.63□□□□□ -0.39
LIMS3-203ENST00000480744 TOR3AQ9H497 397 aa12.63□□□□□ -0.39
LIMS3-203ENST00000480744 SP140LQ9H930 580 aa12.63□□□□□ -0.39
LIMS3-203ENST00000480744 NOX4Q9NPH5 578 aa12.63□□□□□ -0.39
LIMS3-203ENST00000480744 CMC2Q9NRP2 79 aa12.63□□□□□ -0.39
LIMS3-203ENST00000480744 CENPVL3A0A0U1RRI6 287 aa12.62□□□□□ -0.39
LIMS3-203ENST00000480744 TNFRSF13BO14836 293 aaPredicted RBP12.62□□□□□ -0.39
LIMS3-203ENST00000480744 MELTFP08582 738 aa12.62□□□□□ -0.39
LIMS3-203ENST00000480744 MMP9P14780 707 aa12.62□□□□□ -0.39
LIMS3-203ENST00000480744 GSTT1P30711 240 aa12.62□□□□□ -0.39
LIMS3-203ENST00000480744 GNALP38405 381 aa12.62□□□□□ -0.39
LIMS3-203ENST00000480744 ZNF121P58317 390 aaPredicted RBP12.62□□□□□ -0.39
LIMS3-203ENST00000480744 CSNK2BP67870 215 aa12.62□□□□□ -0.39
LIMS3-203ENST00000480744 LINC01590Q5TEZ4 76 aa12.62□□□□□ -0.39
LIMS3-203ENST00000480744 WDR86Q86TI4 376 aa12.62□□□□□ -0.39
LIMS3-203ENST00000480744 PDZD9Q8IXQ8 264 aa12.62□□□□□ -0.39
LIMS3-203ENST00000480744 ADGRG5Q8IZF4 528 aa12.62□□□□□ -0.39
LIMS3-203ENST00000480744 SCCPDHQ8NBX0 429 aa12.62□□□□□ -0.39
LIMS3-203ENST00000480744 PGAM5Q96HS1 289 aa12.62□□□□□ -0.39
LIMS3-203ENST00000480744 FAM71F1Q96KD3 344 aaPredicted RBP12.62□□□□□ -0.39
LIMS3-203ENST00000480744 LRGUKQ96M69 825 aa12.62□□□□□ -0.39
LIMS3-203ENST00000480744 PAPOLGQ9BWT3 736 aaKnown RBP12.62□□□□□ -0.39
LIMS3-203ENST00000480744 CHIAQ9BZP6 476 aa12.62□□□□□ -0.39
LIMS3-203ENST00000480744 SIRPDQ9H106 197 aa12.62□□□□□ -0.39
LIMS3-203ENST00000480744 OR10A2Q9H208 303 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms