RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 NRBF2Q96F24 287 aa12.85□□□□□ -0.35
CDK9-203ENST00000480353 TECTBQ96PL2 329 aa12.85□□□□□ -0.35
CDK9-203ENST00000480353 PAPOLGQ9BWT3 736 aaKnown RBP12.85□□□□□ -0.35
CDK9-203ENST00000480353 MARCH7Q9H992 704 aa12.85□□□□□ -0.35
CDK9-203ENST00000480353 NTN4Q9HB63 628 aa12.85□□□□□ -0.35
CDK9-203ENST00000480353 FAM53CQ9NYF3 392 aa12.85□□□□□ -0.35
CDK9-203ENST00000480353 TVP23BQ9NYZ1 205 aa12.85□□□□□ -0.35
CDK9-203ENST00000480353 H2AFY2Q9P0M6 372 aaPredicted RBP12.85□□□□□ -0.35
CDK9-203ENST00000480353 ERVK-18Q9QC07 812 aa12.85□□□□□ -0.35
CDK9-203ENST00000480353 NUP50Q9UKX7 468 aa12.85□□□□□ -0.35
CDK9-203ENST00000480353 POLR3KQ9Y2Y1 108 aaPredicted RBP12.85□□□□□ -0.35
CDK9-203ENST00000480353 DNHD1Q96M86 4753 aa12.85□□□□□ -0.35
CDK9-203ENST00000480353 TRAV38-1A0A0B4J264 116 aa12.84□□□□□ -0.35
CDK9-203ENST00000480353 A0A1B0GWJ7 208 aa12.84□□□□□ -0.35
CDK9-203ENST00000480353 ANXA2P2A6NMY6 339 aa12.84□□□□□ -0.35
CDK9-203ENST00000480353 C3orf80F5H4A9 247 aa12.84□□□□□ -0.35
CDK9-203ENST00000480353 SELENOFO60613 162 aa12.84□□□□□ -0.35
CDK9-203ENST00000480353 PMELP40967 661 aa12.84□□□□□ -0.35
CDK9-203ENST00000480353 HILS1P60008 231 aa12.84□□□□□ -0.35
CDK9-203ENST00000480353 APOFQ13790 326 aa12.84□□□□□ -0.35
CDK9-203ENST00000480353 C1orf146Q5VVC0 180 aa12.84□□□□□ -0.35
CDK9-203ENST00000480353 TMEM236Q5W0B7 351 aa12.84□□□□□ -0.35
CDK9-203ENST00000480353 SFRP4Q6FHJ7 346 aaPredicted RBP12.84□□□□□ -0.35
CDK9-203ENST00000480353 RHOUQ7L0Q8 258 aa12.84□□□□□ -0.35
CDK9-203ENST00000480353 TIGD4Q8IY51 512 aa12.84□□□□□ -0.35
CDK9-203ENST00000480353 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.84□□□□□ -0.35
CDK9-203ENST00000480353 PAPD5Q8NDF8 572 aaKnown RBP12.84□□□□□ -0.35
CDK9-203ENST00000480353 CSNK2A3Q8NEV1 391 aa12.84□□□□□ -0.35
CDK9-203ENST00000480353 OR5K1Q8NHB7 308 aa12.84□□□□□ -0.35
CDK9-203ENST00000480353 OTOSQ8NHW6 89 aa12.84□□□□□ -0.35
CDK9-203ENST00000480353 CADM1Q9BY67 442 aaKnown RBP12.84□□□□□ -0.35
CDK9-203ENST00000480353 MS4A7Q9GZW8 240 aaPredicted RBP12.84□□□□□ -0.35
CDK9-203ENST00000480353 RGCCQ9H4X1 137 aa12.84□□□□□ -0.35
CDK9-203ENST00000480353 KRT84Q9NSB2 600 aa12.84□□□□□ -0.35
CDK9-203ENST00000480353 OPN4Q9UHM6 478 aa12.84□□□□□ -0.35
CDK9-203ENST00000480353 LGALS8O00214 317 aa12.83□□□□□ -0.36
CDK9-203ENST00000480353 PHYHO14832 338 aa12.83□□□□□ -0.36
CDK9-203ENST00000480353 CIB2O75838 187 aa12.83□□□□□ -0.36
CDK9-203ENST00000480353 FSTL3O95633 263 aa12.83□□□□□ -0.36
CDK9-203ENST00000480353 CD80P33681 288 aa12.83□□□□□ -0.36
CDK9-203ENST00000480353 OPRL1P41146 370 aa12.83□□□□□ -0.36
CDK9-203ENST00000480353 NPY4RP50391 375 aa12.83□□□□□ -0.36
CDK9-203ENST00000480353 CRISP1P54107 249 aa12.83□□□□□ -0.36
CDK9-203ENST00000480353 FAM3AP98173 230 aa12.83□□□□□ -0.36
CDK9-203ENST00000480353 BNIP1Q12981 228 aa12.83□□□□□ -0.36
CDK9-203ENST00000480353 KCTD18Q6PI47 426 aaPredicted RBP12.83□□□□□ -0.36
CDK9-203ENST00000480353 COMMD2Q86X83 199 aa12.83□□□□□ -0.36
CDK9-203ENST00000480353 SEMA6DQ8NFY4 1073 aa12.83□□□□□ -0.36
CDK9-203ENST00000480353 FAM81AQ8TBF8 368 aa12.83□□□□□ -0.36
CDK9-203ENST00000480353 RAB40AQ8WXH6 277 aa12.83□□□□□ -0.36
CDK9-203ENST00000480353 GCDHQ92947 438 aaPredicted RBP12.83□□□□□ -0.36
CDK9-203ENST00000480353 SPSB4Q96A44 273 aa12.83□□□□□ -0.36
CDK9-203ENST00000480353 SGK3Q96BR1 496 aa12.83□□□□□ -0.36
CDK9-203ENST00000480353 MICU1Q9BPX6 476 aa12.83□□□□□ -0.36
CDK9-203ENST00000480353 NUDT16L1Q9BRJ7 211 aaKnown RBP12.83□□□□□ -0.36
CDK9-203ENST00000480353 NIPAL2Q9H841 368 aa12.83□□□□□ -0.36
CDK9-203ENST00000480353 SLC25A19Q9HC21 320 aa12.83□□□□□ -0.36
CDK9-203ENST00000480353 IGHV2-70DA0A0C4DH43 119 aa12.82□□□□□ -0.36
CDK9-203ENST00000480353 C5orf63A6NC05 138 aa12.82□□□□□ -0.36
CDK9-203ENST00000480353 OOEPA6NGQ2 149 aa12.82□□□□□ -0.36
CDK9-203ENST00000480353 G3V2T6 193 aa12.82□□□□□ -0.36
CDK9-203ENST00000480353 ADAM20O43506 726 aa12.82□□□□□ -0.36
CDK9-203ENST00000480353 NDUFA2O43678 99 aa12.82□□□□□ -0.36
CDK9-203ENST00000480353 FASP25445 335 aa12.82□□□□□ -0.36
CDK9-203ENST00000480353 GSK3AP49840 483 aa12.82□□□□□ -0.36
CDK9-203ENST00000480353 CD276Q5ZPR3 534 aa12.82□□□□□ -0.36
CDK9-203ENST00000480353 KCTD8Q6ZWB6 473 aa12.82□□□□□ -0.36
CDK9-203ENST00000480353 BBS1Q8NFJ9 593 aa12.82□□□□□ -0.36
CDK9-203ENST00000480353 HIST1H2AAQ96QV6 131 aa12.82□□□□□ -0.36
CDK9-203ENST00000480353 AMELYQ99218 206 aa12.82□□□□□ -0.36
CDK9-203ENST00000480353 MROQ9BYG7 248 aa12.82□□□□□ -0.36
CDK9-203ENST00000480353 ABCB9Q9NP78 766 aa12.82□□□□□ -0.36
CDK9-203ENST00000480353 ENOPH1Q9UHY7 261 aa12.82□□□□□ -0.36
CDK9-203ENST00000480353 hCG_38984A0A1B0GV85 526 aa12.81□□□□□ -0.36
CDK9-203ENST00000480353 ENSAO43768 121 aaKnown RBP12.81□□□□□ -0.36
CDK9-203ENST00000480353 MRPL3P09001 348 aaKnown RBP12.81□□□□□ -0.36
CDK9-203ENST00000480353 FCGR1AP12314 374 aa12.81□□□□□ -0.36
CDK9-203ENST00000480353 ESRRGP62508 458 aa12.81□□□□□ -0.36
CDK9-203ENST00000480353 IL5RAQ01344 420 aa12.81□□□□□ -0.36
CDK9-203ENST00000480353 WDR25Q64LD2 544 aaPredicted RBP12.81□□□□□ -0.36
CDK9-203ENST00000480353 LYPD2Q6UXB3 125 aa12.81□□□□□ -0.36
CDK9-203ENST00000480353 ZDHHC13Q8IUH4 622 aa12.81□□□□□ -0.36
CDK9-203ENST00000480353 PARP8Q8N3A8 854 aa12.81□□□□□ -0.36
CDK9-203ENST00000480353 FAM216AQ8WUB2 273 aa12.81□□□□□ -0.36
CDK9-203ENST00000480353 RTL8AQ9BWD3 113 aa12.81□□□□□ -0.36
CDK9-203ENST00000480353 YIPF3Q9GZM5 350 aa12.81□□□□□ -0.36
CDK9-203ENST00000480353 ZNF391Q9UJN7 358 aa12.81□□□□□ -0.36
CDK9-203ENST00000480353 LRP12Q9Y561 859 aa12.81□□□□□ -0.36
CDK9-203ENST00000480353 AP4S1Q9Y587 144 aa12.81□□□□□ -0.36
CDK9-203ENST00000480353 TMEM14AQ9Y6G1 99 aa12.81□□□□□ -0.36
CDK9-203ENST00000480353 IGHV3OR16-10A0A075B7F0 116 aa12.8□□□□□ -0.36
CDK9-203ENST00000480353 GYPAP02724 150 aa12.8□□□□□ -0.36
CDK9-203ENST00000480353 ANOS1P23352 680 aa12.8□□□□□ -0.36
CDK9-203ENST00000480353 MTNR1AP48039 350 aa12.8□□□□□ -0.36
CDK9-203ENST00000480353 DAPP51397 102 aa12.8□□□□□ -0.36
CDK9-203ENST00000480353 PSMA6P60900 246 aaKnown RBP12.8□□□□□ -0.36
CDK9-203ENST00000480353 ACTR3P61158 418 aa12.8□□□□□ -0.36
CDK9-203ENST00000480353 PAX8Q06710 450 aa12.8□□□□□ -0.36
CDK9-203ENST00000480353 PTGES3Q15185 160 aaKnown RBP12.8□□□□□ -0.36
CDK9-203ENST00000480353 ATP6AP1Q15904 470 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms