RNA–Protein interactions for RNA: ENST00000479414.1

CCDC58-204, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-204ENST00000479414 WDR82Q6UXN9 313 aa2.73□□□□□ -1.97
CCDC58-204ENST00000479414 COMMD1Q8N668 190 aa2.73□□□□□ -1.97
CCDC58-204ENST00000479414 C19orf18Q8NEA5 215 aa2.73□□□□□ -1.97
CCDC58-204ENST00000479414 OR9A2Q8NGT5 310 aa2.73□□□□□ -1.97
CCDC58-204ENST00000479414 ZNF707Q96C28 371 aaPredicted RBP2.73□□□□□ -1.97
CCDC58-204ENST00000479414 ENOPH1Q9UHY7 261 aa2.73□□□□□ -1.97
CCDC58-204ENST00000479414 ZNF257Q9Y2Q1 563 aa2.73□□□□□ -1.97
CCDC58-204ENST00000479414 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.73□□□□□ -1.97
CCDC58-204ENST00000479414 BRCA1P38398 1863 aaKnown RBP2.73□□□□□ -1.97
CCDC58-204ENST00000479414 SCN4AP35499 1836 aa2.72□□□□□ -1.97
CCDC58-204ENST00000479414 TTC41PQ6P2S7 1318 aa2.72□□□□□ -1.97
CCDC58-204ENST00000479414 ZNF233A6NK53 670 aa2.72□□□□□ -1.97
CCDC58-204ENST00000479414 ZNF99A8MXY4 864 aaPredicted RBP2.72□□□□□ -1.97
CCDC58-204ENST00000479414 POLR1CO15160 346 aaPredicted RBP2.72□□□□□ -1.97
CCDC58-204ENST00000479414 EIF1BO60739 113 aaKnown RBP2.72□□□□□ -1.97
CCDC58-204ENST00000479414 PAHP00439 452 aa2.72□□□□□ -1.97
CCDC58-204ENST00000479414 GLAP06280 429 aa2.72□□□□□ -1.97
CCDC58-204ENST00000479414 EIF1P41567 113 aaKnown RBP2.72□□□□□ -1.97
CCDC58-204ENST00000479414 ELF3P78545 371 aaPredicted RBP2.72□□□□□ -1.97
CCDC58-204ENST00000479414 ZNF33AQ06730 810 aa2.72□□□□□ -1.97
CCDC58-204ENST00000479414 DMC1Q14565 340 aa2.72□□□□□ -1.97
CCDC58-204ENST00000479414 ZFP3Q96NJ6 502 aa2.72□□□□□ -1.97
CCDC58-204ENST00000479414 OPALINQ96PE5 141 aa2.72□□□□□ -1.97
CCDC58-204ENST00000479414 NUDT9Q9BW91 350 aa2.72□□□□□ -1.97
CCDC58-204ENST00000479414 CALN1Q9BXU9 219 aa2.72□□□□□ -1.97
CCDC58-204ENST00000479414 OR2AG1Q9H205 316 aa2.72□□□□□ -1.97
CCDC58-204ENST00000479414 C8orf33Q9H7E9 229 aaPredicted RBP2.72□□□□□ -1.97
CCDC58-204ENST00000479414 FBXO8Q9NRD0 319 aa2.72□□□□□ -1.97
CCDC58-204ENST00000479414 CAB39Q9Y376 341 aaPredicted RBP2.72□□□□□ -1.97
CCDC58-204ENST00000479414 SAR1BQ9Y6B6 198 aa2.72□□□□□ -1.97
CCDC58-204ENST00000479414 TRAV6A0A075B6T7 132 aa2.71□□□□□ -1.98
CCDC58-204ENST00000479414 RAD1O60671 282 aa2.71□□□□□ -1.98
CCDC58-204ENST00000479414 CD82P27701 267 aa2.71□□□□□ -1.98
CCDC58-204ENST00000479414 MICU2Q8IYU8 434 aa2.71□□□□□ -1.98
CCDC58-204ENST00000479414 WDR34Q96EX3 536 aa2.71□□□□□ -1.98
CCDC58-204ENST00000479414 FAM19A4Q96LR4 140 aa2.71□□□□□ -1.98
CCDC58-204ENST00000479414 JSRP1Q96MG2 331 aaPredicted RBP2.71□□□□□ -1.98
CCDC58-204ENST00000479414 SCGB3A2Q96PL1 93 aa2.71□□□□□ -1.98
CCDC58-204ENST00000479414 OR4K3Q96R72 315 aa2.71□□□□□ -1.98
CCDC58-204ENST00000479414 ZSCAN16Q9H4T2 348 aaPredicted RBP2.71□□□□□ -1.98
CCDC58-204ENST00000479414 MRPL22Q9NWU5 206 aaKnown RBP2.71□□□□□ -1.98
CCDC58-204ENST00000479414 RHBDL2Q9NX52 303 aa2.71□□□□□ -1.98
CCDC58-204ENST00000479414 RHBDD3Q9Y3P4 386 aa2.71□□□□□ -1.98
CCDC58-204ENST00000479414 SVILO95425 2214 aa2.7□□□□□ -1.98
CCDC58-204ENST00000479414 A0A0A6YYD5 115 aa2.7□□□□□ -1.98
CCDC58-204ENST00000479414 A0A1B0GUH1 482 aa2.7□□□□□ -1.98
CCDC58-204ENST00000479414 CTNSO60931 367 aa2.7□□□□□ -1.98
CCDC58-204ENST00000479414 CYB5R3P00387 301 aaPredicted RBP2.7□□□□□ -1.98
CCDC58-204ENST00000479414 TRBV12-3P01733 135 aa2.7□□□□□ -1.98
CCDC58-204ENST00000479414 MT-ND4P03905 459 aa2.7□□□□□ -1.98
CCDC58-204ENST00000479414 CATP04040 527 aaKnown RBP2.7□□□□□ -1.98
CCDC58-204ENST00000479414 TACSTD2P09758 323 aa2.7□□□□□ -1.98
CCDC58-204ENST00000479414 RAB5AP20339 215 aa2.7□□□□□ -1.98
CCDC58-204ENST00000479414 HTR1DP28221 377 aa2.7□□□□□ -1.98
CCDC58-204ENST00000479414 TGFBR1P36897 503 aa2.7□□□□□ -1.98
CCDC58-204ENST00000479414 UBE2E1P51965 193 aa2.7□□□□□ -1.98
CCDC58-204ENST00000479414 YIF1BQ5BJH7 314 aa2.7□□□□□ -1.98
CCDC58-204ENST00000479414 BEX5Q5H9J7 111 aa2.7□□□□□ -1.98
CCDC58-204ENST00000479414 H3F3CQ6NXT2 135 aa2.7□□□□□ -1.98
CCDC58-204ENST00000479414 OPN5Q6U736 354 aa2.7□□□□□ -1.98
CCDC58-204ENST00000479414 RAB43Q86YS6 212 aa2.7□□□□□ -1.98
CCDC58-204ENST00000479414 CMTM8Q8IZV2 173 aa2.7□□□□□ -1.98
CCDC58-204ENST00000479414 KIF2BQ8N4N8 673 aa2.7□□□□□ -1.98
CCDC58-204ENST00000479414 TRAM1L1Q8N609 369 aa2.7□□□□□ -1.98
CCDC58-204ENST00000479414 DRAM1Q8N682 238 aa2.7□□□□□ -1.98
CCDC58-204ENST00000479414 SLC35G3Q8N808 338 aa2.7□□□□□ -1.98
CCDC58-204ENST00000479414 UBE2E2Q96LR5 201 aa2.7□□□□□ -1.98
CCDC58-204ENST00000479414 AGMATQ9BSE5 352 aa2.7□□□□□ -1.98
CCDC58-204ENST00000479414 DHCR7Q9UBM7 475 aaKnown RBP2.7□□□□□ -1.98
CCDC58-204ENST00000479414 SEC16AO15027 2179 aa2.69□□□□□ -1.98
CCDC58-204ENST00000479414 A0A1W2PRD5 423 aa2.69□□□□□ -1.98
CCDC58-204ENST00000479414 TMEM120BA0PK00 339 aa2.69□□□□□ -1.98
CCDC58-204ENST00000479414 NCF1BA6NI72 391 aaPredicted RBP2.69□□□□□ -1.98
CCDC58-204ENST00000479414 NCF1CA8MVU1 366 aaPredicted RBP2.69□□□□□ -1.98
CCDC58-204ENST00000479414 C16orf90A8MZG2 172 aa2.69□□□□□ -1.98
CCDC58-204ENST00000479414 TAAR5O14804 337 aa2.69□□□□□ -1.98
CCDC58-204ENST00000479414 PLIN3O60664 434 aa2.69□□□□□ -1.98
CCDC58-204ENST00000479414 MPDU1O75352 247 aa2.69□□□□□ -1.98
CCDC58-204ENST00000479414 CD28P10747 220 aa2.69□□□□□ -1.98
CCDC58-204ENST00000479414 THRAP10827 490 aa2.69□□□□□ -1.98
CCDC58-204ENST00000479414 SFTPCP11686 197 aa2.69□□□□□ -1.98
CCDC58-204ENST00000479414 GPR1P46091 355 aa2.69□□□□□ -1.98
CCDC58-204ENST00000479414 CLDN8P56748 225 aa2.69□□□□□ -1.98
CCDC58-204ENST00000479414 TSC22D1Q15714 1073 aa2.69□□□□□ -1.98
CCDC58-204ENST00000479414 IGFBP7Q16270 282 aa2.69□□□□□ -1.98
CCDC58-204ENST00000479414 C6orf99Q4VX62 202 aa2.69□□□□□ -1.98
CCDC58-204ENST00000479414 HIKESHIQ53FT3 197 aa2.69□□□□□ -1.98
CCDC58-204ENST00000479414 FAM222AQ5U5X8 452 aa2.69□□□□□ -1.98
CCDC58-204ENST00000479414 TMEM236Q5W0B7 351 aa2.69□□□□□ -1.98
CCDC58-204ENST00000479414 OR2T5Q6IEZ7 315 aa2.69□□□□□ -1.98
CCDC58-204ENST00000479414 LINC00336Q6ZUF6 198 aa2.69□□□□□ -1.98
CCDC58-204ENST00000479414 UNC93AQ86WB7 457 aa2.69□□□□□ -1.98
CCDC58-204ENST00000479414 BBOF1Q8ND07 529 aa2.69□□□□□ -1.98
CCDC58-204ENST00000479414 OR2T29Q8NH02 315 aa2.69□□□□□ -1.98
CCDC58-204ENST00000479414 GLYATL2Q8WU03 294 aa2.69□□□□□ -1.98
CCDC58-204ENST00000479414 CDS1Q92903 461 aa2.69□□□□□ -1.98
CCDC58-204ENST00000479414 PEX13Q92968 403 aa2.69□□□□□ -1.98
CCDC58-204ENST00000479414 IP6K3Q96PC2 410 aa2.69□□□□□ -1.98
CCDC58-204ENST00000479414 KCNS3Q9BQ31 491 aa2.69□□□□□ -1.98
CCDC58-204ENST00000479414 MARVELD1Q9BSK0 173 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms